Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ZAT6                                        --------->LBD16                                      ------>ZmHOX2a(2)                                      <-------TEIL                                    <---------ARR14(2)          ----------->GT1                                    --------->AGP1      ------>MYB83                             <---                                    --------->ARR14(2)  --------->MYB52(1)                       ----                    --------->TOE2(3)<------ZmHOX2a(2)<---------MYB59 --------->ARR11(3)       ------       <---------AHL20(2)         ----------->ARR10<-----------GT1    <---------AHL20(1)     --------      --------->AHL20(2)---------->DOF2<---------ANAC46 ------>MYB46(1)                      <-------   aaaatcaatttaaaatcaaaaacattaaaagttgtatagatccgtagagtttgtaacctaatggttatgttatatattcgaatagaaatagatagtatag  17640300                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                 <---                                                                                                 <---                                                                                                 <---                                            --------->At4g35610                                  <---                                          <------ZmHOX2a(1)                                      <---                                    <---------LBD16                                              <---   ---------->DOF2                  <-------TEIL                                                 ---- ------ZAT6                       <---------SPL7                                               ------ ------->GT1                    <---------TOE1(3)                 --------->ANAC58            ------- ----->GT1                     <-----------RAV1(2)                --------->ANAC58            <------ ->ZAT14                    <---------GLK1(1)   ---------->DOF2--------->ZAT2     <----------ID1<---- --ZAT14           <------ZmHOX2a(1)--------->SPL7   --------->CCA1(2)--------->AtMYB61    <---------DEAR3(1)   tgataaaaagaagttgtaccaggacgttggagttcaggtacggaggagatgaaagacatgagaccagcacgaccaaagaatttagcgacgaagacggtgg  17640400       ----------->HVH21 -----NtERF2 ------->ALFIN1 ------->ATERF1(1) ------ANAC58 ------ANAC46           ======================HOX2a_HOX2a ------O2               =============================HOX2a_HOX2a ------TGA1a            <------ZmHOX2a(2) ------bZIP60(2)  --------->ARR14(2)               ------->TEIL               --------->ZAT6 ------ANAC58     <---------ARR14(2)              <---------AtLEC2          <---------ARR11(3) ----->O2        <------NtERF2                   <-------TEIL               --------->ARR11(3) >NtERF2      <---------LBD16                 <------ZmHOX2a(1)       --------->HSFB2a(2) -->ALFIN1    <---------At4g35610      <------ZmHOX2a(1)              <---------HSFB2a(2) ---DEAR3(1)  <------NtERF2          --------->ANAC58              <----------DOF2    <-------TEIL <- --NtERF2   <---------DEAR3(1)       --------->ANAC58             <---------DAG2   --------->REM1(1)   cgtggccttgtgactcggcggattcgatccattgaaggcaaggacgaaggatgcatgtttcactgcaaccttttcgaagaactctacatccattgcaact  17640500         --------->LBD16   <---------ARR11(3)        <---------------AGL15        --------------->AGL15       <---------AHL20(1)                              --------->AHL20(2)       <-----------------AGL1       --------->AHL20(1)                              <---------AHL20(2)       ----------------->AG--------->AHL20(1)                                      --------->AHL20(2)       ----------------->AGL1       <---------ARR11(3)                      --------->ALFIN1   <----------DOF2         --------->ARR11(3)                            --------->DAG2 --------CCA1(2)   ---------->DOF2  --------->ARR11(3)----------->GT1   ---------->DOF2   catttcttttccgaaatttgaaaaagaaatatatccaatattttgggaaactctacttgttaaaacaaaaactgaaaagtgtcgatttaattcgggtttg  17640600                 --------->ATHB12                <---------YAB1                                                                   ----   --------->ANAC58             ----------->GT1                            <-----------TBP    -------   --------->AtLEC2           ---------->DOF2                   --------->ARR11(3)     ----------->GT1   --------->ANAC58<---------WOX13(1)                      *TSS <---------ARR11(3)     <---------ANAC46   agagcatgcaaataggttttgattgaagaagggaaagagaaaacaagtttcaagaagatgagagaagatagtatgagatttatagaggggagtgaataat  17640700                                                                                              <------                                                                                    <---------ICU4                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->ATHB51                                                                                    --------->ATHB12                                                                                   --------->ICU4                                                                                --------->AHL20(2)                                         <----------DOF2       --------->AHL20(2)<---------ICU4                                         ------>ZmHOX2a(1) <---------YAB1       --------->ICU4-------      --------->ZAT18             <----------DOF2    --------->ATHB51           <---------AHL20(2)     --------->ALFIN1      <---------AHL20(2)<----------DOF2   <---------AHL20(2)--------->YAB1  <--- ------>DOF2           <----------DOF2---------->ID1 <---------ICU4       ------->MYC3        <------ -->YAB1          <------------------------ANAC81   <---------MYB52(1)    <-------MYC3        -------   aaagagagtgtgccaacttgtgtttcttttttattcctttgtcctttcttttccattatttctaattaaaaaaccatgtgtattaattatttgaaattta  17640800 <---------LBD16 ---AHL20(1)                                     --------->AHL20(2) -->AHL20(1)                                 ----------->GT1 ------YAB1                                 --------->DAG2                      <---------ICU4 ---AHL20(2)      ---------->DOF2          ---------->DOF2                     --------->ICU4 -->AHL20(2)<---------GLK1(2)<---------TOE2(3)----------->GT1     ---------->DOF2           ---------   ttatggggaagacagaaactcaaaggagattgagataacattttgaaaagttaaaatacttatgtgaataaagaatgggtcatattgacacaaataaact  17640900                                                               --------->REM1(2)                                                              --------->ALFIN1                                                      --------->ATHB12           <---------AHL20(2)                        <---------YAB1         --------->TOE2(3)                           --------->AHL20(2)        <--------HAHB4                               <---------AHL20(2)                         -----        <---------ICU4                   <---------ANAC58   <---------ANAC58                  -------        --------->YAB1                   <---------ANAC46   <---------ANAC46         --------->DAG2       <------ZmHOX2a(2)                 <---------ANAC58   <---------ANAC58        ---------->DOF2 <       <---------ATHB12  <---------At4g35610         --------->AHL20(1)     ---------->DOF2   ------- >AHL20(2) --------->AHL20(2) <---------WOX13(1)    --------->AHL20(2) ----------->GT1      <------ZmHOX2a(1)   agtttttcgatcattaattcaaacttgagttgatttataagttgctggtttcaattttattggtgtgtagaaaatgtaaaaagagagaaagtgaggacga  17641000                                                                               --------->LBD16                                                                               ------>NtERF2                                                                               <---------HSFB2a(2)                                                                               --------->HSFB2a(2)                                                                              --------->ANAC46                                                                             <---------LBD16                                           <---------ANAC46              <-----------ARR10                                          <---------MYB46(3)             --------->ARR14(2)    ------                                         --------->ALFIN1             <---------ANAC58        -------     <------ZmHOX2a(1)                  --------->ALFIN1              <---------ANAC58        -------    ----------->HVH21                 <---------ANAC58             <---------ARR14(2)         ------- ----->DOF2                           <---------ANAC46             --------->ARR14(2)       --------- -->ANAC58                            <---------ANAC58          <---------ANAC58         <-----------HVH21 ------ZmHOX2a(1)     --------->GLK1(1)<-------GAMYB            <---------ANAC58        <-----------RAV1(1) -->ANAC58    --------->MYB59  --------->ARR11(3)       ---------->DOF2 <---------MYB52(1)  <--------   aaggacaggacagagttagggagggattccaaaggtattggcgttgggggaagagagagaaagagagcgtttccgtttctccgcgaacacttgtcgctga  17641100                                                                                               ------                                                                                              <------                                                                                           <---------AHL20(2)                                                                                       <-------------                                                                                       --------------                                                                                      ---------------                                                                                  <---------ANAC58                                                        --------->ZAT18           --------->ANAC58                                                        <---------ZAT14           <---------ANAC55(2)         --------------->AGL15                          --------->ZAT14           --------->ANAC58       ------>ZmHOX2a(1)                         <---------TOE2(3)                <---------ANAC58 >NtERF2 ============================================================================================ -->WRKY38(1)                                   ---------->DOF2                  --------------->AtSPL8 ---->HVH21             <----------DOF2  <---------TOE2(3)                       --------------->AtSPL3 -->WRKY12           <-----------GT1    ---------->DOF2 <---------ZAT18      <---------------AtSPL3 >At4g35610       <---------ZAT6    <---------TOE2(3) --------------->AtSPL8 <---------------AtSPL8 -At4g35610      <---------YAB1<----------DOF2<---------YAB1       <----------DOF2--------->ANAC55(2)   ctcagactcctcttatattagtattactttcttcttttaagttaaagtattaaagatgtgtactcttctcttttttataagagtacgtactatataatga  17641200  Previous    Next  AGI:  At4g37540.1    Description:  LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39). Identical to LOB domain-containing protein 39 (LBD39) [Arabidopsis Thaliana] (GB:Q9SZE8;GB:Q8LBC9); similar to LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38) [Arabidopsis thaliana] (TAIR:AT3G49940.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96782.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 17639527    to: 17640659    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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