Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->GLK1(2)        <---------MYB52(2)                                --------->YAB1   --------->ANAC58                                      <---------YAB1   --------->ANAC58                                    --------->YAB1   --------->ANAC46                                    <---------ICU4  --------->LBD16                  <---------ZAT6      -------->ATHB1 ---------LBD16                    ----------->GT1    <---------AHL20(2) ------->DEAR3(1)       --------->WOX13(1)            --------->AHL20(2)                            - ------>ANAC46        <------ZmHOX2a(2)               --------->ICU4<----------DOF2          <------ZmHOX2a(1) ------At5g28300     <---------ARR11(3)               <---------ATHB51          <---------YAB1      < -----ALFIN1         --------->ARR11(3)   --------->AHL20(2)    <---------GLK1(2)       <------ZmHOX2a(1)   accgcgcgaaacaaacctgtttagatcattcaacattgtgttaaaaatatagagaaattattataagattctttgtgtgattttgatagaggagaggact  17604500                   <------MYB46(1)                   <------MYB83                                              <---------AHL20(2)                 --------->ALFIN1                                           --------->AHL20(2)             --------->LBD16                                              >>>>>>>>>GATA-1            <---------TOE1(1)                                     --------->ANAC58            <---------LBD16                                       --------->ANAC58           <---------LBD16                                        --------->ANAC46        <------MYB46(1)                                         <---------ALFIN1        <------MYB83                        --------->DAG2     <---------ZAT18       --------->MYB59                <---------ANAC46         <---------ZAT14 <----------DOF2<-------GAMYB    <---------ANAC58              --------->ZAT14 -------->TOE2(3)<--------P      <---------ANAC58              --------->ZAT18                 ------ -----------------AGL3 --------->GLK1(1)   ---------->DOF2  --------->At4g35610     <----------DOF2<-   cacctttatttggtccggggttgggaaatcgaagtgcctgcctggtaaagccgagttgaagttgctgcactcaatagataaaattccttttaaaaaaaaa  17604600                                     --------->YAB1                          <-------MYC3                                     <---------ICU4         --------->ARR11(3)                                    <---------ATHB12        <---------ARR11(3)    <---------GLK1(1)         --------->YAB1             --------->ICU4------>ZmHOX2a(1)          ------->MYC3       ----------->RAV1(1)          <---------ATHB51    ---------->DOF2     <---------ANAC46 --->AHL20(2) <---------YAB1 --------->YAB1      --------->TOE2(3)          --------->O2 ----------RAV1(1)         <---------KAN4(2)    <---------ICU4              <---------O2      <------   aatgttggccaacataaccattgttttcgaatgatcaaataatgaaacaatccttacttaaagatgtctaaaacagcaacgtggaaatcgtcgaagttgt  17604700                                                                <---------PCF2                                                               <---------SPL7                                                              <---------MYB46(3)                                                              --------->ABI4(2)                                                             --------->ALFIN1                                                           <---------DEAR3(2)                                                           <---------MYB46(3)                                                          <---------At1g77200                               ------->TEIL               <---------DREB2C(2)                             --------->ZAT18              <---------DEAR4(1)                             <---------ZAT14            <-----------HVH21                             --------->ZAT14       --------->At4g35610          ----------->GT1    <---------ZAT18       <---------At4g35610<---------STY1(1)    <---------DAG2        <---------ZAT6           ----------->RAV1(2)--------->STY1(1)    <----------DOF2       <---------ANAC46    --------->YAB1<-------GAMYB ----------------->AGL2    < ---MYB46(3)       <---------ANAC46          <-------TEIL <---------DEAR3(1)                        -   tgatagctttttgggtaaattgtttgtagagtgaacccattaccatattcatcatctgcgtcggtggtacccctaggccaaatatcgaaatctatttaga  17604800                                                           <------MYB83          --------->ANAC58                                 ----------->GT1          ----------->GT1                                  <------MYB46(1)          --------->ANAC58            --------->ATHB12    --------->MYB59               ---------->DOF2        <------ZmHOX2a(1)          <-----------GT1      <---------MYB52(1)           <---------HSFB2a(2)       <----------ID1       --------->At5g28300    <---------ICU4              <----------DOF2 --------->CCA1(2)         ----------->GT1        <---------ATHB51            <---------DAG2 ---------ARR11(3)      ------------>MYB.PH3(1)   <---------YAB1  <---------AHL20(2) --------->HSFB2a(2) -------->ARR11(3)      --------->MYB52(1)     ----------->GT1    --------->AHL20(2) --------->LBD16   aagatatataggacgaaaatttgtcaaaacggttatataacgatttgagtcgataattgttaggttaaaaaattgcaaaaccttttccgagaaagcccat  17604900                                                                                                    <                                                                                                   <-                                                                                                  <--                                                                                                <----                                                                          --------->ALFIN1      <----                                                                          <---------ANAC46     ------                           <----------DOF2                              <---------ANAC58       <-----               <---------HSFB2a(2)                                      <---------ANAC46     <-------               --------->HSFB2a(2)              <---------YAB1       <---------AtMYB61       <-------   -------->P  <---------HSFC1(1)   >>>>>>>>>TBF1   --------->AHL20(2)  <---------ANAC58     <------- --------->MYB46(3)        *TSS <------ZmHOX2a(1)   <-----------TBP<------------CBF     <---------O2<   tgaactacccatattgtctagaagttagtctttaggaagaagaaaatgttatgtttatatacaaatttgtattggtgtgtggaatcagagacttggcttg  17605000 ------MYB46(1)                              <---------ARR14(3) --------MYB46(3)                      --------->ANAC46 -------ANAC46                        <---------ZAT14 --MYB83                        ------->TEIL --------->ARR11(3) --MYB46(1)                    <---------CCA1(2) --->ALFIN1              --------->ARR11(3)  <---------ARR11(3)                     --------->TOE2(3) ----AtMYB61            <---------GLK1(2)--------->ANAC46                         --------->GLK1(2) --ANAC58        --------->ANAC58     --------->ZAT14          <---------ANAC58   --------->ARR11(3) --ANAC58        --------->ANAC58     <---------REM1(2)   --------->YAB1          <-----------ARR10 --ANAC46 <----------DOF2--------->GLK1(2)   --------->ARR14(3)<---------ANAC58   <---------ARR11(3) ------MYB83   ---------->DOF2 <---------GLK1(2)  <---------MYB46(3)  <----------DOF2            <---   gtgggtttgtgtctttgcaaagccaagaatcttgaatctctacacaagaccttggttcaagtataacttgtgctttacttacaaaatcttagccatttct  17605100                                                                                                    -                                                                                                   <-                                                                                    --------->GLK1(1)                                                                          ----------------->AGL1<----                                                                         -------->P <---------GLK1(1)                                                                         ------>MYB83          <-----                        ---------->DOF2                                  ------>MYB46(1)       ------                    --------->YAB1               ------>ZmHOX2a(1)    <---------ANAC58         <-----                  --------->AHL20(2)          ---------->ID1          <---------ANAC58      <--------                <----------DOF2           <---------ANAC58           --------------->AtSPL8--------->AHL20(2)          --------------->AtSPL8          <---------ANAC58          <-----------GT1<---------ARR11(3)          <---------------AtSPL8          <---------bZIP60(2)   <----------DOF2    --------->ARR11(3) ------REM1(2)------->TEIL          ---------->TaMYB80      <----------DOF2--------->YAB1 <---------MYB52(1)   tcacagttgagtaatgtacttttaataaaagcatggggaatatgacttgtcctctattctcactttctttttgcctaccatattagatatccattaattt  17605200                                                                                                   --                                                                                                 <---                                                                                               <-----                                                                                               <-----                                                                                             <-------                                                                                            <--------                                                                      ---------->DOF2      --------->MYB55(2)                                                                    --------->AHL20(2)     <------MYB46(1)  <----------DOF2                                                   --------->YAB1         <---------MYB46(3) --------->ID1                                                   --------------->AGL15     <------MYB83 ----------GT1                --------->ANAC58                   <---------------AGL15     --------->ATHB12 -----AHL20(2)                --------->ANAC58                   ==================================== ----AHL20(1)            <------ZmHOX2a(1)                     <-------TEIL              <---------WOX13(1) --->AHL20(2)          --------->ANAC46                     ----------->GT1            --------->ATHB12 ----AHL20(2)          <---------TOE2(3)    ------->TEIL   <---------------AtSPL8     <---------YAB1 -AHL20(2)         <---------HSFB2a(2)   <---------YAB1    --------------->AtSPL8  <---------AHL20(2)   ttttctttttcaaatctagttctctaaggaacaagacaaaaatatgaatctagctatttgaaaggtacaataaaaagcattgtattatatgattggttgg  17605300                                                               <---------GLK1(1)                                                             <---------ANAC46                                                             <------MYB83                     ------>MYB83                                                             <---------ANAC58         <---------ICU4                                                             <---------ANAC58        <---------AHL20(2) ---->ZmHOX2a(2) --------->AHL20(1)                 --------->TGA1a                  --------->AHL20(2) ------AGP1      <---------AHL20(1)                 <---------TGA1a               --------->YAB1 -MYB83          --------->AHL20(2)                 <---------O2      --------->CCA1(2)       ------>MYB46(1) -MYB46(1)       <---------AHL20(2)              <---------ZAT18     --------->ARR14(2)     <-------- -P           --------->YAB1        --------->YAB1  --------->O2     <---------ARR14(2)  <-----------GT1 -ANAC46   ----------->GT1     ----------------->AGL3        <------MYB46(1)     <---------ATHB12 ================================================MADS_MADS  --------->MYB59      --------->AHL20(2)   atctatacatgtttagtaataaattttagacaattcatttatagcaacttggccacttgagttgggtatcagatatgaattcaataaatatttaccaact  17605400  Previous    Next  AGI:  At4g37445.1    Description:  similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G64850.1); similar to Os02g0126600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045753.1); similar to unknown [Oryza sativa (indica cultivar-group)] (GB:ABR26063.1) Range:  from: 17604088    to: 17604927    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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