Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------HSFB2a(1)                                                                       --------->ALFIN1                                                                       <---------DEAR3(1)                                                                      --------->ATERF1(1)                                                                      <------NtERF2                                                                      <---------LBD16                                                                      ------>NtERF2                                                                      <---------At4g35610                                                                     <---------RAP2.3(1)                                                                    <---------RAP2.3(2)                                                                <----------DOF2                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                              <------NtERF2--------->HSFB2a(1)                                                             <---------RAP2.3(1)                                                             ------>NtERF2 <---------HSFC1(2)                                                             <---------MYB46(3)                                                             <---------ERF1<---------MYB46(3)                                                            <---------RAP2.6(2)                                                            <---------ANAC46                                                            <---------RAP2.3(2)                                                            <---------DEAR3(1)                                                           --------->ATERF1(1) ------>ZmHOX2a(2)                                         <------NtERF2  <---------AtMYB61 ---------GLK1(1)                                         ------>NtERF2<---------ANAC46 -------->GLK1(1)                                         <---------RRTF1(1) ------ZmHOX2a(2)                                         <---------ERF1 <------NtERF2            <-- --------AGP1                                             <---------RAP2.3(1)                 <------ ----------ARR10                                         <---------DEAR3(1)--------->HSFC1(2) ------- --------ARR14(2)                                 <---------ARR11(3)<---------RRTF1(2)    ------>ZmHOX2a(2) ------->ARR14(2)                                 <-----------ARR10<---------LBD16     --------->YAB1 ------->ARR11(3)                                 --------->ARR11(3)<---------DEAR3(1) --------->ATHB12 -------CCA1(2)                                   <---------ARR14(2)<---------RAP2.6(2)<---------ICU4 ------DEAR3(2)                                  --------->RVE1(1)<-----------RAV1(1) <---------ATHB12 -NtERF2------>ZmHOX2a(1)                  ----------->GT1<---------DEAR4(2)     ------>ZmHOX2a(1)--- -----HVH21                               --------->ALFIN1<---------ATERF1(1)    ================HOX2a_HOX2a ->DEAR3(1)                            --------->ATHB12  <---------RAP2.3(3) <---------ARR14(2) ----- >DEAR3(2)    <---------KAN4(2)       <---------YAB1     <---------RAP2.3(2) --------->ARR14(2)<-----   ggatctcgtccttacgaatatacagaaacgaattgagtctatgagtggagaatatctcgacggcggctatgcggcggaggttcctccaatgatcgccgta  17564200                       <---------REM1(1)                               --------->ANAC58                     <-------GAMYB                                  XXXXXXXXXXXXXXXXXXXXX>MIR447C                    <---------ANAC46                            <---------HSFB2a(2)                    <---------ANAC58                         <---------ARR14(2)                    <---------ANAC58                        <-------GAMYB               <------MYB46(1)                              <---------SPL7    ------>NtERF2  <------NtERF2                           <---------DEAR3(2) -------At4g35610--------->ALFIN1                          <---------MYB46(3) ---SPL7       <------MYB83    --------->ALFIN1            --------->MYB55(2) -->At5g28300 --------->MYB46(2)<---------ZAT2            <---------DEAR3(1)      <----------DOF2 ------>At4g35610<---------DEAR3(1) <---------ANAC58   <---------RAP2.3(3)       --------->MYB52(2) ---->SPL7    --------->MYB111(1)   <---------ANAC58 --------->ALFIN1  --------->ANAC58 ----MYB52(1) --------->MYB111(2)  <-------TEIL <---------ZAT18 --------->HSFB2a(2)   agatgccgagagtaagtaggtggcgttgtagccgaggtgcttacttatggtgaacttggggcggttcgcgagaacgacatcgttctttgtgaaacattct  17564300                                                                                                  <--                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                   --------->ARR14(2)          <-----                                                                   <---------ARR14(2)          ------                                                                  <---------GLK1(1)           <------                   ----------->HVH21           <------NtERF2      --------->GLK1(1)     ---------->DOF2                 --------->CCA1(2)         <-----------HVH21--------->LBD16       ---------->DOF2 ---                 --------->At4g35610--------->GLK1(1)     <---------LBD16   --------->ARR14(2)<------            --------->REM1(2)       <---------GLK1(1)    --------->MYB52(1) <---------ARR14(2)-------   tcagcgatggaacgtgaagagatgacataaacgaggcgatttccgagtcggagatggaagaccggagcatttccgatggatttggaaagggaaaggaagg  17564400                                                             <---------ANAC46                                                            <------NtERF2                                                          ----------->HVH21                                                          --------->DEAR3(1)                                                         <------NtERF2                                                         --------->ATERF1(1)                                                         --------->RAP2.3(1)                                                        <---------RAP2.3(1)                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                       --------->ATERF1(2)                                                    ------>ZmHOX2a(2)                                                   ======================HOX2a_HOX2a                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)                                                  --------->ARR14(2)                                                  --------->ARR11(3)                                                  <---------ARR14(2) <------MYB46(1)       <---------DEAR3(1)               --------->DREB2C(2) --------->ATERF1(1)   ---------->DOF2                      --------->ATERF1(2)<---------ATERF1(1) -----TEIL   <---------ANAC58           <---------ATERF1(2)------>NtERF2                 ------>ZmHOX2a(2) -----SPL7 <---------MYB46(3)           --------->DEAR3(1)<---------DEAR3(1)           <---------AGP1 --->HSFC1(2)<---------ANAC46         --------->MYB52(1)--------->LBD16                <---------ARR11(3) -MYB46(1) ------>NtERF2            <------ZmHOX2a(2)  --------->DEAR3(1)              <---------ARR14(2) ----HSFC1(2)<---------ANAC58      <-----------HVH21=====================HOX2a_HOX2a   --------->ARR14(2) -MYB83--------->ALFIN1           <---------At4g35610  <---------ATERF1(2)      <---------ANAC58 ----HSFB2a(1)                    --------->At4g35610  <---------DEAR3(1)       <---------ANAC58 --->HSFB2a(1)         --------->ALFIN1<---------LBD16--------->ATERF1(1)    <-----------GT1 ---------AtSPL8   <------ZmHOX2a(1)=====================================HOX2a_HOX2a   --------->ARR11(3) ------>SPL7<------NtERF2     <-----------HVH21  <---------GLK1(1)<------ZmHOX2a(1)   <---------CCA1(2) ---------AtSPL3   ========================HOX2a_HOX2a<---------LBD16<------MYB83 <---------MYB52(1) -->MYB59 <---------DEAR3(1) --------->ALFIN1    --------->GLK1(1)==============================HOX2a_HOX2a   tacggtgaagcggtggcttgaggagatggaggtgtccgatcaccggcaaggagatcgccggcgacggaggaaggtttagtttccgtttggatcttgtgag  17564500                                               <------MYB83                                            --------->CCA1(2)                                            --------->ARR14(1)                                           --------->ARR11(3)                                           <---------ARR11(3)                                           --------->ARR11(1)                                       -                                           --------->ARR14(2)                                       <                 ---------->DOF2           <---------ARR14(2)              <---------PCF2         <--            ----------->GT1           <------ZmHOX2a(2)                 <-----------RAV1(1)       <--           <---------TOE2(3)         --------->ARR11(3)                 --------->ALFIN1  <----------DOF2           <---------TOE1(3)        <------ZmHOX2a(1)                 <-----------RAV1(1) *TSS<------  --------->GLK1(2)         --------->CCA1(2)  <------MYB46(1)<---------YAB1          <----------DOF2   caagaatatggctaaggtaaaaagagagagaaatgagaggatcaagatttggttcaaatccattttgtttgtttgtggggctctctctctttctttcttt  17564600                                                           <---------YAB1                                                          <---------AHL20(2)                                                          <---------AHL20(1)                                                        <---------AHL20(2)                                              --------->ANAC58                                              --------->ANAC58                                            <---------WRKY12                                            <---------WRKY38(1)                                           --------->WRKY18(1)     <---------ICU4      <----------DOF2                  <-------MYC3  --------->ARR11(3) --------->ID1                         ------->MYC3  --------->AHL20(2) ---------CCA1(2)             --------->CCA1(2)      <---------AHL20(2) -------ANAC58   <------------CBF  <-------TEIL      <---------ARR11(3)              <---------ARR11(3) -------ANAC58 <---------YAB1<---------ARR11(3)      <---------AHL20(1)              --------->ARR11(3) ----DOF2    <-----------GT1 --------->ARR11(3)      --------->AHL20(1)          ---------->DOF2  <--   tcgtctctcttttttttactattgttttggagatatatacatgtggtcaaggaaatatattatttttaaaaattatgctctataaaagataatgtactat  17564700                                                                  <---------YAB1                                                                 <---------AHL20(1)              ----                                                                 --------->AHL20(2)        <---------                                                                --------->YAB1          --------->ARR14(2)                                                               --------->ICU4           --------->ARR11(3)                                                          --------->ANAC58              <---------GLK1(2)                   --------->TOE1(2)                      --------->ANAC46              --------->ARR14(3)                  --------->HSFB2a(1)                     --------->ANAC58  <---------GLK1(1) <------                  <---------HSFB2a(1)             ---------->DOF2<---------AHL20(2)     <---------ARR11(3) ---------HVH21  <---------TOE1(2)<---------TOE2(3)--------->DAG2--------->AHL20(1)     <---------ARR14(3)   tgtcacaagttcaaattcgaacgttggactctaattaagaaaaaccttttaaaaaagcagacgaaattataattctagatttcttctcaagattttcttt  17564800                            <---------AHL20(2)                <----------DOF2                   <----                         --------->AHL20(2)                 ------>ZmHOX2a(1)                   <----                         <---------ARR11(3)             <-----------GT1                        <-----                         --------->AHL20(1)          <---------ICU4 --------->ANAC55(2)       -------   ----------->GT1       <---------AHL20(1)          <---------AHL20(2)            ----------->GT1 <- ---------->DOF2         <---------AHL20(2)          --------->AHL20(2)       ---------->DOF2 <------ ----->TOE2(3)           --------->ARR11(3)          --------->ATHB51     --------->YAB1      ------- --GT1                --------->AHL20(2)            --------->ICU4<-----------GT1 <---------------AtSPL8 ----DOF2             <---------AHL20(2)------->TEIL<---------AHL20(2) --------->YAB1    ---------->DOF2   cttaaaagtaaaatataagtgtattaatatattatttggatgtatcacctcgaaattatttcctctttttacataataacaaaagtagtacaaaagtaac  17564900                                                                         --------->MYB52(1)                                                                        --------->MYB46(3)                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                              --------->ARR14(3)                                                              <-----------ARR10                                                              <---------ARR14(3)                                                              --------->GLK1(2)                                                              <---------ARR11(3)<---------ANAC46                                                   <---------ARR14(2)  ------>MYB83 --------MYB.PH3(1)                                --------->ARR14(2)  ------>MYB46(1)      <-------MYC2 --------AtMYB77                                  ------>NtERF2<------ZmHOX2a(2)<---------ANAC58 ----At5g28300                                   <---------ZAT18      --------->ANAC46      <-------MYC3 ----->MYB.PH3(1)                           ---------->DOF2<---------TOE2(3)------->GAMYB   ------->MYC2 --------MYB52(1)                        --------->At4g35610  --------->ARR11(3)<---------ANAC58   -- -----GT1                                <---------At4g35610 <------ZmHOX2a(1) ------>NtERF2------->MYC3 -->MYB52(1)                    ---------->DOF2  --------->ZAT18------>ZmHOX2a(2)    <----------DOF2-   cgttactcaaaaaacacaaattagcatttagtacaaaagtctaagctcaagcggactcgttgaggatcttaccaacaacggggcgtgctttgcacatggc  17565000                                                                                --------->YAB1                                                                              --------->ANAC58            <----------DOF2                                                   --------->ANAC58    ------->GAMYB                ------>ZmHOX2a(1)    <---------ALFIN1        --------->ANAC46  ------>MYB83                ------>ZmHOX2a(1) --------->ARR14(2)          <---------ALFIN1  ------>MYB46(1)      <---------YAB1           <---------ARR14(2)     ------>ZmHOX2a(1) --------->MYB52(1)  <---------ICU4            <---------CCA1(2)   <---------ARR14(2) ------->MYB46(3)   --------->ICU4           --------->YAB1       ------>ZmHOX2a(1) -------->AtMYB61  <----------DOF2 <---------ALFIN1<---------ALFIN1--------->ARR14(2)         -------   taccaacggtatagctttgggcattatgactcctcctccaccttcagtcatatccacctcttcttctcctatcctctcccactcaaaacattgaatcaaa  17565100  Previous    Next  AGI:  At4g37330.1    Description:  CYP81D4 (cytochrome P450, family 81, subfamily D, polypeptide 4); oxygen binding. similar to CYP81D8 (cytochrome P450, family 81, subfamily D, polypeptide 8), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37370.1); similar to CYP81D5 (cytochrome P450, family 81, subfamily D, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71949.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 17562339    to: 17564590    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g37340.1    Description:  CYP81D3 (cytochrome P450, family 81, subfamily D, polypeptide 3); oxygen binding. similar to CYP81D2 (cytochrome P450, family 81, subfamily D, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37360.1); similar to CYP81D8 (cytochrome P450, family 81, subfamily D, polypeptide 8), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37370.1); similar to CYP81D5 (cytochrome P450, family 81, subfamily D, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60309.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterP Range:  from: 17564844    to: 17566781    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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