Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->ANAC58                         --------->ANAC58                       ---------->DOF2                      <---------MYB52(1)                     --------->TOE1(3)                     --------->TOE2(3)                                      --------->CCA1(2)                 ------>ZmHOX2a(2)    >>>>>>>>>>FUS3                       --------->ARR14(2)                --------->CCA1(2)     >>>>>>>>>>ABI3                       <---------ARR14(2)                <------ZmHOX2a(2)    --------->ANAC58                      <---------ARR11(3)               --------->ARR14(2)    --------->ANAC58                   <------ZmHOX2a(1)               --------->AGP1  --------->MYB46(3)                     <---------TOE2(3)               <---------ARR14(2)    --------->AtLEC2      --------->AHL20(2)        --------->ANAC46               <---------ARR11(3) <---------ATHB12         --------->YAB1----------->ARR10--------->GLK1(2) -------GT1    --------->ARR11(3)-------->P               <---------ATHB12 --------->ARR11(3)<-------   acaaatttcaattttgagatctacgttaagccatcaaccatgcaaattgtatatgagtcaataatatagattgaggagatatgttatcggccattctggt  17554200                                                   <-------TEIL                                                ----------->GT1                                               <---------TOE2(3)                                               <---------TOE1(3)                                      <----------DOF2                                    ----------------->AGL1              ---------->DOF2                                    ----------------->AG             --------->AHL20(2)                                   <-----------------AG             <---------YAB1                                   <-----------------AGL1        <---------AHL20(2)                                   ---------->ID1 <--------P     --------->AHL20(2)                      <---------YAB1--------------->AGL15     --------->ATHB12                      --------->ICU4<---------------AGL15    --------->ICU4                    --------->O2<----------DOF2--------->DAG2<---------YAB1    --------->ARR11(3)          --------->CCA1(2)<---------ARR11(3)  <---------AtMYB61<---------WOX13(1)                 <- ----RAV1(1)      ----------->RAV1(1) <---------DAG2  <-----------GT1--------->YAB1 --------->ATHB12   gcaacttaaatgatatacagccacatgattatctcttttcctttttggtaaggttgataccacatgattaattataaagaagacattgattagttcatgt  17554300                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                               <-----                                                                                              <------                   --------->DAG2            --------->ALFIN1                               ------->TEIL                  ---------->DOF2           <-------MYC3                               <---------At4g35610                --------->AHL20(2)  --------->YAB1                                     ----------->RAV1(2)       --------->ATHB51            <---------YAB1                                      --------->At4g35610       --------->ATHB12          --------->YAB1                         <-------TEIL   <---------ZAT2      <---------YAB1  --------->ALFIN1      ------->MYC3               --------->AtLEC2--------->ZAT2 ----------GT1  <---------AHL20(2)--------->AHL20(2)                 --------->At4g35610-------------   tttaccacataattggaattaaaagtggtcgcaaattataatcaaacgtggtcgcaaatcgaatttcgatgagatgcaaacgttttttcagctgtacctt  17554400                                                                                               ------                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                      --------->LBD16                                                                --------->AHL20(2)   --------->RAP2.6(2)                                                                <---------AHL20(1)  =================                                                                --------->AHL20(1)  <----------------    <----------DOF2                        ---------->DOF2   --------->AHL20(1)     <---------------- ------>AHL20(2)                         <---------AHL20(2)  --------->AHL20(2)     --------->ATERF1(1) -------AHL20(2)                         --------->AHL20(2)  <---------AHL20(2)     <------NtERF2 ----->AHL20(2)                   <---------LBD16           <---------AHL20(2)      ----------------- -----DOF2                     <----------DOF2            --------->YAB1<----------DOF2<------NtERF2 ---DAG2                      <----------DOF2  <------ZmHOX2a(1)<---------AHL20(2)  <---------LBD16 -->AtSPL8             <-----------RAV1(1)<---------AHL20(2)--------->AHL20(2)   <------ZmHOX2a(1)   ttaattcttttcttatttgttcgaaatgttggcctttggggaattaaaaggacatttcaaaaataatttattgtctttccataggagccggaaatggaaa  17554500                                  <---------MYB59                                 --------->ANAC58                                 --------->ANAC58                                --------->PCF5                                --------->TCP16(1)                              <---------ZAT18                              --------->WRKY38(1)                              --------->ZAT18                              --------->WRKY12                                                  <----                           <---------ANAC58                                                --------->YAB1                           <---------ANAC46            <---------AHL20(2)     <---------------AGL15 ---->DOF2     --------->ANAC46<---------TCP16(2)      --------->AHL20(2)     ======================= =============================================================================================MADS_MADS -AGL1        --------->ZAT18--------->ALFIN1    <----------DOF2      ---------->DOF2      <---------ICU4 -AG       --------->AtLEC2<---------ANAC58   --------->GLK1(2)     --------->CCA1(2)     --------->ICU4 >AGL1--------->YAB1     <---------YAB1    ------------>CBF      ----------->GT1     ----------->GT1   agcttcaatcttcatgcacactatgttttgagtggacccaatttcgacaatctttttttaaatgaagaagataaaagttgttttttttggtaataatgtc  17554600                                             --------->ANAC58                                             --------->ANAC55(2)                                             --------->ANAC58                                   *TSS      --------->ANAC46                                 <------------CBF                                     --------->PCF2                               --------->ARR14(2)                           <------ZmHOX2a(1)                               <---------ARR14(2)                       ---------->DOF2 --------->ZAT18  <-----------TBP--------------->AGL15      <---------TOE1(3)          <---------AHL20(2) -----ANAC46  <-----------GT1  --------->ARR11(3) <---------YAB1       --------->AHL20(2)     ------- ================================MADS_MADS <-----------GT1     --------->YAB1     ---------->DOF2   gagtatttatagttttataccatgtttagtgagtatattgcagtttcacgttatgaaatttgtaatgagaaaattaaaggactaaaaaggcccactaaaa  17554700                                                               --------->ALFIN1                                                              <-------MYC2                                                     <---------DAG2                                               <----------DOF2<-------MYC3                                               ------>ZmHOX2a(1)         ---------->DOF2                                           --------->ARR14(2) ------->MYC3                                           <---------ARR14(2) ------->MYC2                                          --------->GLK1(1)<---------ANAC58                 <--------                                          <---------GLK1(1)<---------AtLEC2      <---------ZAT14     <-------TEIL   --------->ANAC46   <---------At4g35610 <---------ANAC58    --------->At4g35610 --->DOF2    <----------DOF2         <---------ZAT18 <----------DOF2<-------GAMYB--------->ZAT14   gcccatatacattttcttttaaacacaactaaaaaccagtgagcaaatcctttctctttttgcatgtgtgtgttgtaaagcagtggacagagacgacgat  17554800                                             --------->At4g35610                                             <---------At4g35610                                       --------->LBD16                                      --------->ANAC58                                      --------->ANAC55(1)                                      --------->ANAC46                                 <---------ETT(1)                              --------->ARR14(2)                        --------->ANAC58  ---------->DOF2                 --------->LBD16 ----------->HVH21             --------->ANAC58--------->CCA1(1)             --------->ANAC58--------->RVE1(1)    <------ZmHOX2a(2)      --------->At4g35610      ---------->DOF2   --------->ANAC58 --------->ARR14(2)              <---------ZAT2             -  <---------TOE1(1)  <----------ID1  <---------LBD16                     <---------At4g35610      ---  <---------TOE2(1) --------->DEAR3(2)--------->ANAC58              <------ZmHOX2a(2)      ---------- --------->SPL7<---------LBD16<---------ARR14(2)--------->At4g35610--------->ARR14(2)  <---------ANAC58 -------------WRI1<------NtERF2  --------->ANAC46--------->ARR11(3)<-----------HVH21   <---------ANAC58   gagtacgatgaagccaagccggagcgacgaaatatccgacccggaacagcagatcaagaacgcgaaccagatcagagctgatttcgattccttggctccc  17554900                                                                                 --------->At4g35610                                                                                 <---------At4g35610                                                                                 --------->ZAT2                                         <---------AGP1                      ------>ZmHOX2a(1)                                         --------->ARR11(3)                ----------->RAV1(2)                                         <---------ARR11(3)               ------>MYB46(1)                                         <---------ARR14(2)               ------>MYB83                                         --------->ARR14(2)            --------->MYB46(3)                                        <---------CCA1(2)            --------->ORA47(1)                                      ------>ZmHOX2a(1)             --------->MYB46(3)               ------>MYB83           --------->LBD16               <---------MYB55(2)               ------>MYB46(1)       <---------LBD16                --------->DEAR3(1)              <---------ALFIN1      <---------ANAC46                --------->DREB2C(2)       --------->ANAC46             ----------->RAV1(2)             --------->DEAR4(1)      ------>MYB83               --------->GLK1(1)                  <---------MYB46(2)    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <---------ETT(1)--------->AtMYB61    --------->MYB46(3)           <---------GLK1(1) <---------At4g35610------>MYB46(1) -------->MYB46(3)              --------->ARR14(2) --------->At4g35610------>MYB83 ----------->HVH21 ------>MYB52(1)             --------->LBD16<----------DOF2        --------->DEAR3(2)   <xxxxxxxxxxxx >ARF1------>MYB46(1)       <---------LBD16------>ZmHOX2a(2)     <-----------GT1 <---------ZAT2   aaacgacccactaaacccactcgaagcgaaccgggatttcctggatctttctctgcttccgacaaaatcaccgaccatcctgaagctgacaaattccaat  17555000                                                                       --------->TOE2(3)                                                                       --------->TOE1(3)                                                                      ----------->GT1                           --------->ZAT6                          <----------DOF2               ----                       <---------MYB52(1)                       <---------ARR11(3)             <-----                      <-------GAMYB                             --------->ARR11(3)  --------->GLK1(2)    <-----------HVH21<------MYB46(1)                          ------>MYB83         --------->ARR11(3) --------->ZAT14     <------MYB83                             ------>MYB46(1)      <---------ARR11(3) xxxxsmallRNA(s)    --------->MYB59       <----------DOF2  --------->MYB46(3)    <---------TOE2(3)   ctctccagtcacaaactcatgttcggttatctctaaaactcgctcttttctcttcacataaaccaacatctttcgttaaatttgagattttggtttttca  17555100  Previous    Next  AGI:  At4g37300.1    Description:  MEE59 (maternal effect embryo arrest 59). similar to hypothetical protein [Vitis vinifera] (GB:CAN63462.1) Range:  from: 17554635    to: 17555855    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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