Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ARR14(2)                                    <---------------AGL15   >>>>>>>>>RAP2.2                  --------------->AGL15   --------->TOE2(3)               ----------------->AGL2                           ------>ZmHOX2a(2) --->KAN4(2)                       ----------------->AG                           <---------ARR14(2) ---ICU4                           ----------------->AGL1              <-------TEIL<------ZmHOX2a(2) --YAB1---------->DOF2             ----------------->AGL3    --------->TOE2(3)    --------->ARR14(2) -ARR11(3)                 ------->TEIL               --------->ARR14(2)      <---------LBD16 >ARR11(3)            --------->REM1(1)  ---------->DOF2     --------->YAB1 <----------DOF2   tccaatctaaaaagctctaatgctacatgaatccattaccaaaaaaagaaaactcgaatccaatctcaatgggttcatctttcggatcgtcgtaacttga  17549000                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                            ------>ZmHOX2a(2)                                  <-----                                           <------ZmHOX2a(2)                    --------->CCA1(2)                             <---------ARR14(2)                                --------->ARR14(2)                         ----------------->AGL2                        --------->LBD16       <-------               <---------GLK1(1)          --------->ARR11(3)          <---------ANAC55(2)   ---------            --------->ANAC58 --------->GLK1(2)                        <---------ANAC58--------->AtMYB61            --------->ANAC58 <---------ARR11(1)                       --------->ANAC55(2)   ---------            --------->ANAC46 --------->ARR14(2)       <---------ATHB12<---------ANAC58===============        -------->P     --------->ANAC58   <---------ARR11(3)          <---------ANAC46------->GAMYB    <---------ARR11(3) --------->ANAC58  <---------GLK1(1)     <---------MYB52(1)    --------->MYB46(3)   --------->GLK1(1)   --------->ANAC46  --------->GLK1(1)   ----------->GT1   <---------ARR14(2)   aaccgaaatctaccaagaaacccctaagccaaatctagcagagagatctcaattcaatgaaaccagttaattccgtagtcggatacaaccaaaacccacg  17549100 -->MYC3 -->MYC2 -->PIF5 ---PIF5 ---MYC3 ---MYC2 --->O2 ----TGA1a --->ANAC46 --->TGA1a                         --------->GLK1(2)            ----------->HVH21 ----O2 <---------ICU4          <---------ARR11(3)              ----------->TGA1 --ALFIN1                       --------->ARR11(3)            --------->At4g35610 >TOE2(2)               --------->ANAC58           <---------ATHB51            ---------->DOF2 >TOE1(2)               --------->ANAC58--------->HSFB2a(2)   <---------At4g35610 ====MYC_MYB          --------->ZAT6    <---------HSFB2a(2)   ----------->RAV1(2)                 ---   tgaaatacaagaattgctaaattaacacgaacaagataatctctagaattcaaattatgcgaacatctgacgatgcacagagaaagagagagagagagag  17549200                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                <----                                                                                          --------->ALFIN1                                                                                         <-----------HVH21                                                                                       <---------DEAR3(1)                                                                                      <---------ORA47(1)                                                                                 <-------GAMYB ------                                                                                <---------MYB46(3)<--                                                                              ------>NtERF2    ------                                                                <---------HSFB2a(2) <---------SPL7---                                                                --------->HSFB2a(2) ----------->HVH21                     --------->LBD16                            --------->LBD16<------NtERF2   ------                    <---------ANAC46                       --------->DEAR3(1) <---------RAP2.6(3)----            <---------ANAC58                            --------->ANAC58      <-----------HVH21------            <---------ANAC58                            --------->ANAC58     --------->DEAR3(1)------     <---------AHL20(2)                             --------->ANAC58         <---------ANAC46<-------    <---------AHL20(2)    --------->ANAC46          --------->ANAC46       <---------At4g35610------- -------->GT1      <------NtERF2<------ZmHOX2a(1)   --------->ANAC58       --------->At4g35610-------   aggttttttatttgccttggctccgtagacgcgaggaccatggtaagcgagaacacgctcgccctccgagaagagtctgccgtcgttggacggtgaggcg  17549300 --------->DEAR3(1) -------->MYB46(3) ------NtERF2 ---->NtERF2<---------GLK1(1) ---NtERF2 <-----------ARR10 ----->RAP2.3(1) ----->ATERF1(1) ------ABI4(2) -----RAP2.3(1)                                                                                  ---- ->NtERF2 <---------ARR14(1)                                                              --------->ANAC46 -----ATERF1(1)             <---------CCA1(2)                                        ------>ZmHOX2a(2) --->ANAC58------->TEIL   --------->DEAR3(1)                                        <------ZmHOX2a(2) -------ALFIN1         --------->ANAC46                                            --------->ARR14(2) --->RAP2.3(2)    <---------MYB52(1)                                               <---------ARR11(3) ------>DEAR3(1) <-----------HVH21                                                 --------->ARR11(3) --->ANAC46<---------ARR14(2)                                                      <-----------ARR10 ----->ERF1--------->ARR14(2)                                                      --------->ARR14(3) --->PCF2 <---------CCA1(2)------>NtERF2                                           <---------ARR14(3) --->ANAC58<---------ARR11(1)                                                      <---------ARR14(2) --ATERF1(1)--------->GLK1(1)                         <-----------HVH21            --------->AGP1---- -->RAP2.3(1)    <-----------TGA1           --------->At4g35610                  ----------->ARR10 -->ATERF1(1)   --------->ANAC46            --------->ZAT2   ---------->DOF2   ---------->DOF2   ----   ccaccgctcgccgtatctccgtcactcgccgtctcttccttcgacgagcttcccattgtcaccgaaagcgagagcgagaggcaaagatcttcacatcaca  17549400            ------->GAMYB          <---------At5g28300         <-----------GT1                     <---------WOX13(1)      <----------DOF2        --------->TOE2(2)  --------->ANAC58           --------->TOE1(2) --------->ATHB12           <------------CBF  --------->ANAC58*TSS     ------->TEIL <---------At4g35610            ------------>CBF      -------- ----->ANAC46    ----------->GT1--------->ANAC46            <---------ANAC46                --------- ----->ANAC58   --------->HSFB2a(2)     --------->At4g35610 <---------ANAC58             <----------DOF2 ----->ANAC58   <---------HSFB2a(2)  <---------At4g35610    <---------ANAC58        <---------MYB52(1)   aggcacccctttaaccgtctagataaatgaatctacgacaactgctgaatgactgaatcgttgcgaatagtttttcaattgagtcccttaactttcacaa  17549500                                                                                 --------->ATHB12                                       <------NtERF2                           <----------DOF2   ----                                      ------>NtERF2                           --------------->AGL15                                     --------->DEAR3(1)                       <---------------AGL15                                    ---------->ARF1                 <---------AHL20(2)        <------                                   <-----------HVH21                --------->AHL20(2)     --------->WRKY38(1)       <---------AHL20(2)         --------->ANAC46                 <---------AHL20(2)    <-------GAMYB ---->CBF                     <-----------GT1   ---------->DOF2    --------->AHL20(2)   <---------MYB46(3) >YAB1--------->AHL20(2)--------->AHL20(2)   --------->YAB1<----------DOF2   ----------------->AGL1   tagttcgattaaatctcttaaaccttttaaatatactcgtcgcccatttataaagcattgtctttttaaaaaaatttatgcctttattggtcgttgagca  17549600                                                                      --------->ATHB12                                                                 --------->AHL20(1)                                         --------->YAB1          --------->AHL20(2)                                         <---------ICU4          <---------AHL20(2)                 -                                         <--------HAHB4         --------->AHL20(2)--------->AHL20(2)-     --------->YAB1                     <---------YAB1<---------AHL20(2)          <---------AHL20(1)- ----->At4g35610          <---------TOE2(3) <-----------GT1     <---------AHL20(2)<---------AHL20(2)- ---At4g35610  <----------DOF2     <-----------GT1    --------->AHL20(2)<---------WOX13(1)    <------   gttggactcatatttcactttggacactgatgtttattaactattattacattcaaataaatataaaaaaattgattaatacattttatttgtatacttt  17549700                                                                    <-----------GT1                                                           -------->ATHB1                                                           <---------AHL20(2)                                                           -------->HAHB4                                                           --------->ATHB12                                                           <---------ICU4                                                           --------->ATHB51                                                          <---------YAB1                                                          --------->ICU4                                                          <---------ATHB51                                        ----------->GT1 --------->YAB1      <----------DOF2            ------>ZmHOX2a(1)      --------->ATHB51      <---------DAG2             <---------------AGL15  <--------HAHB4   <-----------GT1               --------------->AGL15  <--------ATHB1                        ------- -------->ANAC55(2)             ----------------->AGL2  <---------ICU4                  ------->TEIL -------->ANAC58                <-----------------AGL3 --------->ICU4               <---------TOE1(2) -------->ANAC58                ----------------->AGL3 <---------ATHB51            ------>ZmHOX2a(1) -------->ANAC46                --------->TOE2(3)      <---------ATHB12            =================HOX2a_HOX2a ----DOF2                   --------->YAB1             --------->AHL20(2)    <<<<<<<<<TBF1   <------ZmHOX2a(2)   tcaagtaactttatttcactaacaaaacaataatcctaaatatagaaaaatgagacaataattattgtttttgccattcttcttcctatgtatcgatcag  17549800                       --------->ZAT6                 <---------AHL20(1)                          --------->HSFB2a(2)                 <---------ICU4                              <---------HSFB2a(2)                 --------->ARR11(3)                       <-----------GT1                 ------->GAMYB                 <---------ARR11(3)                   --------->AHL20(2)                  --------->DEAR3(1)                 --------->AHL20(1)                  <---------ATHB51                    --------->DEAR3(2)               <---------AHL20(2)                    --------->ICU4                 <---------DAG2               <---------AHL20(1)                    --------->AHL20(2)             <----------DOF2              --------->YAB1    ------->TEIL         <---------AHL20(2)         <---------ZAT18 --------->TOE1(2)  <-----------GT1         --------->AHL20(2)   ----------------->AGL1<-----------GT1 -->YAB1 ----------->GT1    <---------TOE2(3)    --------->AHL20(2)             --------->ZAT18<-----   aaacatgagacatgtataatattttccactaatgaaactggaacaaaaaaatgaaataattttctcgacctagatgggtatgggcactttaaccggcccg  17549900  Previous    Next  AGI:  At4g37280.1    Description:  MRG family protein. similar to chromatin binding [Arabidopsis thaliana] (TAIR:AT1G02740.1); similar to MRG family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94215.2); contains InterPro domain Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398); contains InterPro domain MRG; (InterPro:IPR008676); contains InterPro domain Chromo domain; (InterPro:IPR000953) Range:  from: 17546578    to: 17549418    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g37290.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62855.1) Range:  from: 17549678    to: 17550251    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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