Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->GLK1(2)    --------->ARR14(2)                                            ======================HOX2a_HOX2a    <---------ARR14(2)      <---------ANAC58                    <------ZmHOX2a(1)   <---------GLK1(2)        <---------ANAC46          ---------->DOF2 ------GT1                  <---------ANAC58          <---------ICU4                   <-----------GT1 ---YAB1               ------->TEIL                  --------->ICU4              <------ZmHOX2a(1)  - -ICU4  ------>ZmHOX2a(1)<----------DOF2           --------->YAB1 <------ZmHOX2a(2)  <---------AHL20(2)   caagagattcctctccaagaacatggactttcgtgtttgtaattccatgtctgtaataaagacagaggatcaacaagaacagaggatttaaacttcatca  17530100       <-----------HVH21   ------>MYB83   ------>MYB46(1)          --------->GLK1(1)                                                       -   -------->P    ---------->DOF2                   ----------->GT1                     <---------ICU4 --------->AtMYB61        <------ZmHOX2a(1)       >>>>>>>>>TBF1               <---------YAB1--------- -------->MYB46(3)     --------->At4g35610 ---------->DOF2      --------->GLK1(1)      --------->YAB1   aaaccaacccatcagagtttaaagcagaggaactcaaaacagagcaaaagaagaagaaaatcactgaaatcaactccattctcattgcatcatcacacta  17530200                                                                                          <---------ZAT14                                                                                        --------->ANAC58                                                                                      --------->ZAT6                                                                                    ------>MYB83                                                                                    ------>MYB46(1)                                                                                  <---------MYB59                                                                                 --------->MYB46(3)                                                                            --------->O2--------->ANAC46                                                                            --------->TGA1a                                                                            <---------O2--------->ANAC58                                                                            --------->bZIP60(1)                                                                            <---------TGA1a<---------ALFIN1                                                                            --------->ANAC58                                                                            <---------ANAC55(2)                                                                            --------->ANAC55(2)    --                                                                            --------->ANAC46       <-                                                                            --------->ANAC58       --                                                 =====================================bZIP_DOF     <-                                                 ---------->DOF2            =========================                                             ----------->GT1           <---------At4g35610--------->ZAT14             --------->CCA1(2)        ----------->HVH21    ---------->DOF2  --------->ANAC55(1)   ---            --------->ARR11(3)      --------->ALFIN1       ===========================bZIP_DOF  ----- ---------->HVH21                   <---------ANAC46  --------->CCA1(2)--------->At4g35610<---------ZAT18 >ZAT6      <---------ARR11(3)   <---------AtMYB61<---------TOE2(3)    --------->ZAT2 <---------ALFIN1   ttgtgacagagagagatatgaagaagagagagggagaggtgtgaagggagttaaagatagagaaagagaaaacagctcacgtaaccaaacactccacttc  17530300       ---------->DOF2                                                <---------AHL20(2) ------->At4g35610                                                    --------->AHL20(2) --------ZAT2                                                       --------->TOE2(3) ------->ZAT2                                                    --------->GLK1(2)          --------- --------At4g35610                                   --------->ARR11(3)                     <-------- =================bZIP_DOF                           --------->AHL20(1)           <---------ICU4 --->ZmHOX2a(1)             <----------DOF2          <---------AHL20(1)        --------->YAB1  <----- ------>RAV1(2)         <----------DOF2             --------->YAB1  <----------DOF2         <--------   ctgctccctaaatgctctctctctctctttctttgtgtctctgtctctctgcaaaaatattgcagagtttctttaattctataatcaatacgactacaca  17530400                                  <---------------AtSPL8                                  <---------------AtSPL3                                  --------------->AtSPL8                               <---------AHL20(2)                             <---------YAB1                           --------->YAB1                        --------->YAB1      <---------At5g28300 <---------YAB1     <-----------GT1    <---------ICU4             <-----------GT1              --------->DEAR3(1) >ZAT14                <---------YAB1            <-----------GT1              --------->At4g35610   *TSS -REM1(2)            --------->YAB1  <-----------GT1                          <---------At4g35610   - ----ALFIN1         --------->AHL20(2)      <----------DOF2           <----------DOF2              <- -ZAT14             <---------AHL20(2)  <----------DOF2           <----------DOF2     --------->CCA1(2)   cttcttgttacggtcttcttcatttattattatgaaattgtactttctttttttctctctctctctctctttctttagtgagccgaagaaacgagtagat  17530500                             <---------AHL20(2)                             --------->AHL20(2)                        <---------ARR11(3)                      --------->ANAC46                      --------->ANAC58                                                            ---                      --------->ANAC58                                                            ---                    --------->REM1(1)                                                            ----                <---------At4g35610                                                              ----               --------->ANAC58                                                <-----------------AGL2               --------->ANAC58                                        <---------ARR11(3)    --------        --------->GLK1(2)  <-----------TBP        ----------->GT1      --------->ARR11(3)    -------- -------->GLK1(2) --------->CCA1(2)           <---------TOE2(3)    --------->ANAC55(2)       -------- --------GLK1(2)--------->At4g35610          ---------->DOF2  <----------DOF2  <-----------------AGL3   agattcttagaatcagtaagctacaagacatttatatcatctatagctaaagttgtaaatttgacttttacatgatattcttctgtttttggttcacaca  17530600   ---------->DOF2 ------>MYB46(3) --------->CBF                <---------AHL20(2) ----->ANAC58                 <---------YAB1 ----->ANAC58                --------->AHL20(2) ->ANAC58                    <---------AHL20(1) ->ANAC46       --------->GLK1(2)   ------->TEIL                 <---------KAN4(2) ->ANAC58   <---------TOE1(2)--------->AHL20(1)            --------->MYB52(1)   accaatatagctcgaaggaatctaaatcgaatataatggatgtttttgaattttagaaaaataagggcatgttcttggtttttgtttttagaatatagtt  17530700                                                                                                  ---                                                                                                 <---                                                                                            <--------                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                                                        --------->ALFIN1                                                                                        <-----------RAV1(1)                                                                                       ------->MYC3                          <---------LBD16     <---------TOE2(3)                        <-------MYC3         <---------At4g35610     <---------AHL20(2)               <-----------GT1      <-------MYC2         --------->At4g35610  <---------ARR14(2)     <----------DOF2                   ------->MYC2 <   tcgaatgtctctgctgttttccattttttggggattttttttttgtttatggatgctttacaagtattttactctgtaaatggtttccatgtgctgctta  17530800                                                                      --------->GLK1(2)                                                                     --------->ARR11(3)                                                                     --------->ARR14(2)           <--                                                                     <---------GLK1(2)            <--                                                                     <---------ARR14(2)           ---                                                                    --------->HSFC1(2)            <--                                                                    --------->HSFB2a(1)           ---                                                                    <---------HSFC1(2)           <---                                                                    <---------HSFB2a(1)          ----                                                                   ----------->ARR10           ------          <---------YAB1                 <---------ICU4         --------->LBD16          --------->ANAC58 --------->ATHB12             <---------AHL20(2)               --------->HSFB2a(2)       --------->ANAC46 ------>YAB1                 <---------AHL20(2)                <---------HSFB2a(2)       --------->ANAC58 ------YAB1                  <---------AHL20(1)               --------->SPL7            --------->SPL7 -At4g35610                  --------->AHL20(2)               <---------LBD16         <---------SPL7 ---------YAB1           <---------YAB1 --------->ICU4      <---------SPL7          --------------->AtSPL8   ttatcatttgtttttattcgtttgattacaattttttttgtaataagtagagctatttcagtcgtccggaagattctgcattcaattctgtacgaaataa  17530900          --------->ANAC58          --------->ANAC46    ---------->ID1 -------AHL20(2)                                                                           --------->AHL20(2) ------ATHB1            --------->ATHB12        --------->ANAC58                          <---------YAB1 ------>AHL20(2)       --------->AHL20(2)       --------->ANAC58                        <---------ICU4 -------ICU4           <---------AHL20(2)     --------->ZAT6                            --------->ATHB12 ------>ATHB51        <---------WOX13(1)    <-----------GT1                             --------->YAB1 ------YAB1        <---------YAB1      --------->AHL20(2)        --------->ARR11(3)    --------->ICU4 ----->ICU4   <-------TEIL           --------->AHL20(2)      ---------->DOF2 <----------DOF2 --->YAB1 --------->ANAC58      ----------->GT1 --------->ANAC46 <---------ARR11(3)<---------YAB1   taatttgtcttcaagctacatatgattaattggagggaaaataatataacactccatgagtttaaaagagcttcacattctttatatgaatgattatatg  17531000  Previous    Next  AGI:  At4g37250.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to RLK (RECEPTOR-LIKE KINASE), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G67280.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G23300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71921.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N- Range:  from: 17527644    to: 17530500    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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