Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->AHL20(1)         <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(1)                     --------->TOE1(2)        --------->AHL20(2)                      ------->GAMYB     ---------->DOF2        <---------AHL20(2)                     --------->ANAC58--------->TOE2(3) -------->TOE2(3)                              --------->ANAC58<---------MYB59 -------->TOE1(3)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------ARR11(3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <------------AtMYB77 ------>GLK1(2)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       --------->MYB52(1) ------>ARR11(3)                          --------->YAB1  --------->ANAC55(2)         <-----------GT1 ----->RVE1(1)--------->AHL20(2)         <---------YAB1   <---------ANAC55(2)----------->GT1 ----->CCA1(1)<---------AHL20(2)      --------->ICU4     <-------TEIL       ----------->GT1   -------   aatcttaaaattaaatttaaatatgagaaaacatgttgaacttatgataacgcacgagttacatacctaaaagacgggatgttaaatctaaccgttccag  17511900                                                                                    <----------DOF2                                                                                    <---------DAG2                                                                                   <---------DAG2                                                                                  ----------------->AGL1                                                                                  ----------------->AG                                                    <---------AHL20(2)            --------------->AGL15                                                   --------->AHL20(2)             <---------------AGL15                                               <---------AHL20(2)                <-----------------AG                                            <---------AHL20(1)                   ----------------->AGL1                                            --------->AHL20(1)                   <-----------------AGL2                                            --------->AHL20(2)                   ----------------->AGL2         <---------TOE2(3)                <---------AHL20(1)                     ----------------->AG        <-----------GT1                   --------->AHL20(1)                     <-----------------AGL1       <-----------GT1                    <---------ARR11(3)                    <-----------GT1      --------->AHL20(2)                  --------->ARR11(3)            --------->MYB52(1) --------->AHL20(2)                    --------->AHL20(2)            <---------At4g35610 <---------AHL20(2)                   --------->YAB1<---------YAB1   --------->At4g35610    --------- -->HSFB2a(2)   <---------TOE2(3)     --------->AHL20(2)        <----------DOF2<-----------GT1   tatttaaatttaacatttaagtttaaaaacatttttgtaataaaaatattttatataatagaaaaacttttagctaacaattttcccttttcggtaagac  17512000                                                   <---------At5g28300                     <----------DOF2          --------->AHL20(2)                       <---------YAB1                     <---------DAG2         <---------AHL20(2)                     <-----------HVH21                 <-----------GT1          <---------AHL20(2)                     <-------TEIL                <-----------GT1     <-----------HVH21  ----------->GT1    <---------ANAC58         <-   --------->HSFB2a(2)      <---------MYB52(1)<---------AHL20(2)          <---------ANAC46         <-   <---------HSFB2a(2)     <-------GAMYB <---------AHL20(1)               <---------ANAC58         <- >SPL7--------->SPL7<---------DAG2 ------->GAMYB  <-----------GT1    ------>ZmHOX2a(1) --------->ICU4   aacttcggtaagacaaaattacccttttccgttacaacggtcatatatttttttacagcgtaacaattttcctatggcctatgtgcgtcatgagtcaaat  17512100                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              <------                                                    --------->ANAC58                          -------                                      --------->MYB52(2)                                   <---------AHL20(1)                                    <---------MYB52(1)                                     --------->AHL20(1)                                   <-----------HVH21--------->ANAC55(2)              --------->LBD16                                 <------------AtMYB77                                --------->At5g28300       ---------->DOF2           <-----------------AGL2     <---------AHL20(2)    <---------At5g28300 --------ANAC58                 <---------At5g28300 --------->ANAC46         <---------ZAT6<---------ARR11(3) --------ANAC46                 -------->P          --------->ANAC58     <---------AHL20(2)--------->ARR11(3) --------ANAC58                --------->MYB52(1)--------->TOE2(2) <---------CCA1(2)<---------ANAC46   agcttgaacaaaagcggagcagtttagctagactaaccgttagtgggataacatacgcattttttattcgtatattttagtgtttaccgtgaatatttta  17512200           --------->ARR11(3)           --------->AHL20(1)           <---------ARR11(3)        --------->AHL20(2)                                        --------->DAG2 ------->AHL20(2)                                                ---------->DOF2 ------->YAB1                                             <------NtERF2 --------AHL20(2) <-----------GT1                         ------>NtERF2 ----AHL20(2)--------->ARR11(3)                           --------->LBD16 --->AHL20(2)<---------ARR11(3)          <<<<<<<<<MYB2   --------->ANAC58               <---------YAB1 ----YAB1  <---------AHL20(1) <----------DOF2            --------->ANAC58             <-----------GT1 ---AHL20(2) <---------AHL20(1) --------->AHL20(2)      --------->ZAT18           --------->AHL20(2) -->AHL20(2) --------->AHL20(1) <---------AHL20(2)   *TSS--------->ANAC46     ----------->GT1   attaaaacataaaaatattttttcccctaattctttaattttggttttcattttcaagtccgccaaaaaaagcgaagagagggttttaatacgattccac  17512300                                                                    <---------MYB46(3)                                                               --------->LBD16                  -----                                                              --------->ANAC46                  -----                                                           --------->ARR14(2)                   <----                                                           <---------ARR14(2)                   <----                                                       --------->TOE2(3)                        <----                                                     --------->ARR11(3)                         -----                                                     <---------ARR11(3)          --------->At4g35610                                                    --------->CCA1(1)            <---------At4g35610              ---------->ID1                        --------->RVE1(1)<-------GAMYB<---------GLK1(2) <              <---------TOE2(3)               --------->LBD16<---------LBD16 --------->GLK1(2)  <----             <-----------GT1                 --------->HSFB2a(2)   <---------AtMYB61     <-----------HVH21   tcttctcaacaaatttgacgtttttgttcttcgaaattcaaattcacccagaaaaaatctcaatccgcgatggttgaagaatcagcttctgcgtcggaag  17512400                             <------NtERF2                             --------->ATERF1(1)                            ------>NtERF2                            <---------ATERF1(1)                           --------->DEAR3(1)                           <---------DEAR3(1)                           ----------->HVH21                          --------->ATERF1(1)                          --------->RAP2.3(1)                          <------NtERF2                         <---------RAP2.3(1)                         ------>NtERF2                         --------->LBD16                         <---------DEAR4(2)                         <---------ATERF1(1)                        --------->DEAR3(1)                                           <---------ARR14(2)                        <---------ATERF1(2)                                     <-----------HVH21                        --------->ATERF1(2)                                    --------->DEAR3(1)                        <---------DEAR3(1)                   ------>MYB46(1)  <------NtERF2             --------->TOE2(3)                               ------>MYB83     --------->DEAR3(2) ---->At4g35610        --------->ATERF1(1)              ------>MYB46(1)       --------->MYB46(3) ---->HSFB2a(1)        --------->DEAR3(2)             <---------MYB59        ------>NtERF2 -----ZAT2   --------->TOE1(3)<---------ANAC46        <---------MYB46(2)   <---------ABI4(2) -----HSFB2a(1)       <---------ZAT2    --------->LBD16 ------>MYB83     --------->ANAC46 -----At4g35610       --------->ZAT2   <---------ANAC46 --------->MYB52(1) --------->MYB46(3)  <----- ---->HSFC1(2)        <---------ATERF1(1)          <<<<<<<ZML2  --------->TOE2(3)    --------->ARR14(2) ---------DEAR3(1) ------->GAMYB      --------->ZAT18 <---------MYB111(1)--------->ANAC58  <---------MYB46(3) -----HSFC1(2)  --------->MYB52(1)    <---------LBD16 <---------MYB52(2) --------->ANAC58 <---------MYB52(1)   cttcggtgatacaaaccctaaccgagccggcgacggagattgcgcaaaccctagaacctaacctagcctcaatcgaagccaccgtcgaatcggttgttca  17512500                                                      --------->ALFIN1                                                 ------>NtERF2                                                ----------->HVH21                                              ------>NtERF2                                              <---------ATERF1(1)                                              <---------At4g35610                                              --------->At4g35610                      <---------At4g35610                                          --------->ANAC46                             --------->At4g35610                                          --------->DEAR3(1)                      <---------ANAC46     --------->ANAC58      --------->ANAC58  --------->DEAR3(1)                   <---------ANAC58     --------->ANAC58      --------->ANAC58------->GAMYB                   --------->ICU4  <------NtERF2          ------->GAMYB --------->MYB46(3) <---------At4g35610  <------ZmHOX2a(1) ----LBD16      ----------->GT1   --------->YAB1--------->WRKY12 <---------TOE2(3)<---------ANAC58   gggaggcactgaatcgacttgtaacaacgacgctaataacaacaacgccgctgacagtgctgctactgaggtttgtgatgaggagcgtgagaagacgctt  17512600                                                                                     --------->HSFB2a(2)                                                                                     <---------HSFB2a(2)                                                                                 --------->ZAT14               <---------LBD16                                         <---------ANAC58              --------->MYB52(1)                                       <---------ANAC58             ----------->HVH21                                  <------NtERF2 <---------ANAC58-------         <------ZmHOX2a(1)                                     <-----------HVH21 <---------ZAT14    <       <---------TOE2(3)                                      --------->DEAR3(1) <---------ZAT18 ----   <---------At4g35610                                   ---------->DOF2      <---------ANAC58<------   --------->At4g35610                                  ----------->HVH21   <---------At4g35610  <--- --------->ZAT18                                      <---------At4g35610   --------->At4g35610 ----- <---------ZAT14<---------ANAC46       ---------->DOF2--------->At4g35610 <-----------RAV1(2)--------   gagttcgctgaggaattgacggagaaaggctctgtgtttttgaaagagaacgatttcgctgaagccgtcgattgcttcagccgtgctctcgaaatcaggt  17512700 -->ANAC55(2) ----------DOF2 ----->ARR11(3)                              <---------ATHB12                                    ---- ---ANAC55(2)                      --------->ARR14(2)           <---------At4g35610            ------ ------ARR11(3)       --------->GLK1(2)    --------->WOX13(1) <-----------RAV1(2)              <----- ---->GLK1(1)--------->ATHB12   <---------HSFB2a(2)     <---------TOE2(3)            <---------YAB1 ->MYB59    <-------TEIL        --------->HSFB2a(2)     <---------TOE1(3)  ------->TEIL     <--------   atctttttgggagattcatttgagaatttgtagtcgagaacctctcaatcaagggtttagggtttcagatgtttctgaatctagtttatgctcgaatgat  17512800  Previous    Next  AGI:  At4g37210.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN61830.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 17512253    to: 17514619    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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