Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          >>>>>>>>>TBF1     >>>>>>>>>TBF1                   <---------ICU4  >>>>>>>>>TBF1                     <---------YAB1 ------>LBD16                       --------->ICU4 ----->LBD16                      --------->YAB1 -----HSFB2a(2)                  <---------YAB1                                                     - ->ARR14(2)                      --------->ICU4                                                    <- ->GLK1(1)                <-----------RAV1(2)                       <-----------GT1           <------ --GLK1(1)                --------->MYB46(3)              <---------At4g35610                 ------>ZmHOX2a(1) --ARR14(2)           --------->At4g35610                 --------->At4g35610               <-------- >GLK1(1)             <---------At4g35610               <-----------RAV1(2)                 --------- -GLK1(1)  >>>>>>>>>TBF1----------->RAV1(1)           --------->AtLEC2     <---------ARR11(3)<-------   cgaagaagaagaagaagaagagtcagcaacagatgatgatgattccacttccttcgatgcagatgaagtttcaccattatctattaccaatttctcctga  17511000                                                                                  --------->ARR11(3)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                                  <---------GLK1(2)                                                                                 <---------HSFB2a(1)                                                                                 <---------HSFC1(2)                                                                                 --------->HSFC1(2)                                                                                 --------->HSFB2a(1)                                                                            --------->HSFB2a(2)                                                                            <---------HSFB2a(2)    ---------->DOF2                                                         <---------ANAC46 <---------ANAC55(2)                                                       <---------LBD16 -------->MYB59                                                        <------MYB83          <------MYB46(1) ----------RAV1(2)                                              <---------At4g35610          <------MYB83 ---------AGL15                                                 ----------->RAV1(2)--------->GLK1(2) -LBD16 ----------->GT1                              ----------->GT1   <------MYB46(1)      --------- -->RAV1(2)         <---------At4g35610            --------->GLK1(2)<---------MYB52(1)      <-------- ----------AGL1 <----------DOF2               ---------->DOF2 <-----------GT1   ----------->ARR10   atcaggtaaaggctaaaactttagctaatttgccttcgacccatttcaaaaagaatcgaaattttcacctgtttggtttcggaagattctgggtttggtt  17511100                                      <-----------------------TaNAC69(2)                                     <---------DOF5.7(2)                          ----------------->AGL1                          <-----------------AG                          <-----------------AGL1     ---------->DOF2   --------->GLK1(1)                            <---------TOE2(3)    --------->MYB52(1) <---------GLK1(1)                    <---------HSFB2a(2)   ------->GAMYB   --------->ALFIN1  --------->MYB52(1)     --------->HSFB2a(2)  --------->MYB46(3)   --------->At4g35610                 <---------ANAC46                       ---  <---------MYB52(2)   <---------At4g35610             <---------ARR11(3)                    <------MYB83 >MYB59    --------->ANAC58 ------>ZmHOX2a(1)  --------->ATHB12<------ZmHOX2a(1)             <------MYB46(1) -AtMYB61  --------->ANAC58--------------->AGL15       --------->ARR11(3)                    --------   tgcaacgaacagcgcgaaatcgtggagctcctgtttgggtaacgaagaaagattgaagatttcgaggactgagattgaatccatgactagatggaaggtt  17511200                                                                        <---------YAB1                                                                     <---------MYB52(1)                                                                     <---------YAB1                                                                    <-------GAMYB                                                                   ------>ZmHOX2a(2)                                                                   ----------->GT1                                                                   =====================HOX2a_HOX2a                                                                  <------ZmHOX2a(2)                                                                  ======================HOX2a_HOX2a                          <------NtERF2                          --------->ARR14(2)                        <---------LBD16                          --------->ARR11(3)  --------->AHL20(2)  <-----------HVH21  --------->CCA1(2)       <---------ARR14(2)      <---------HSFC1(2) ------->DOF2  --------->ANAC58          --------->At4g35610     <---------ARR11(3)      --------->HSFC1(2) --->GT1       --------->ANAC58          <---------At4g35610 <---------At4g35610 <------ZmHOX2a(1)   taaagaaaatactaagcgagccatcgtcgggagagagtgagagagatgacaaaactgctactcatcagatcgttattatcgaaggagtagtagcttcttc  17511300                         <---------DAG2                    <---------ALFIN1      ------>MYB46(1)    <----------DOF2            <-----------GT1      --------->ANAC58--------->ANAC58    <---------AHL20(2)      ------>MYB83<---------ALFIN1      --------->CCA1(2)   --------->AHL20(2)                      -      --------->ANAC58--------->ANAC46 --------->ARR11(3) --------->AHL20(2)                 <-------TEIL   --------->MYB46(3) --------->ANAC58 <---------ARR11(3) *TSS                 <----------DOF2     --   gtctaaccaagctattagagccacacgctttttgttacaaagatttaaactttgttacaaaataatatgaaatgagtcactctttatattccacatacac  17511400                                      ---------->DOF2                                   --------->YAB1             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                <---------ICU4        <---------AHL20(2)                          --------->TOE2(3)           --------->AHL20(2)            --------------->AtSPL8             <-----------GT1 --------->YAB1           <---------ICU4    --------->ARR11(3) -------->DAG2            <----------DOF2            --------->ICU4  <---------GLK1(2)    <---------ARR11(3) -------->DOF2  --------->TOE2(3)<-----------TBP----------->GT1 <------ZmHOX2a(1)   <---------------AtSPL8   ttaaagtgtttttttttaccttgataaactttaatatttataaagctaagtggtaattttttctaaggacagaatatcaagtttagtttgtacatctttg  17511500                                        <---------AHL20(2)                                        --------->AHL20(2)                                       --------->AHL20(2)                                       --------->YAB1                                   <---------AHL20(2)                                   --------->AHL20(2)                                   <---------YAB1           <---------TOE2(3)   --------->AHL20(2)                 <---------ANAC55(2)    <---------TOE2(3)         <---------ARR11(3)<---------ANAC46  <---------ANAC58   <-----------GT1            <---------AHL20(1)<---------ANAC58  <---------ANAC58  <-----------GT1             --------->ARR11(3)<---------ANAC58  --------->ANAC55(2) --------->MYB52(1) --------->AHL20(2)    ---------->DOF2 <---------AHL20(2)--------->MYB52(1)     --------->AHL20(2)   aaatttaacatttaagttttgaataaaaagaatatatataattaaaatttgcgtttaatcaacggattacttgacgaaaaaaaaaaatcaacggattact  17511600                                                                       <------ZmHOX2a(1)                                                                  --------->ANAC58                                                                  --------->ANAC46                                                                  --------->ANAC58  ---------->DOF2                                                                 xxxxxxxxxxxxxxxx>smallRNA(i)               ---------->DOF2                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->TOE2(3)                                    --------->YAB1   xxxxxxxxxxxxxxxxxxxxxx       <---------YAB1                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <---------YAB1  --------->TOE2(3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)          xxxxxx    <---------AHL20(2)                           --------->ARR11(3) <-----------RAV1(2)      <------ZmHOX2a(1)   --------->YAB1   --------->TOE1(3)   ----------->GT1      <---------YAB1   xxxxxxxxxxxxxxxxxxxxxxx   <---------AHL20(1)             <---------AHL20(2)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->AHL20(2)             --------->AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   tacaatattattcttaaaaaagccttaaaactaaatttaaatatgtgaaaatatgttgaacttataatacgcaggagttacagactaaaagaacaggatg  17511700                                                                                                    -                                                                                                  ---                                                                                                  ---                                                                                                  <--     <----------DOF2                                                                             ---- x>smallRNA(se3)<---------AHL20(2)                                  --------->AHL20(2)           ---- xxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------TOE2(3)         <----------DOF2              <---------YAB1 >smallRNA(le3) --------->AHL20(2)             ----------->GT1   <----------DOF2   <---------GLK1(2)-   ctaaacgctttcaagtatttaaatttcaacatttaagtttgaaaacattttgttaataaacttttagctttaaaatatcaaaacagattatttttgaaaa  17511800         --------->AHL20(2)         --------->AHL20(1)         <---------AHL20(2)         <---------AHL20(1)                     ------->GAMYB        <---------AHL20(2)                      --------->TOE1(2) ---------->DOF2        --------->AHL20(2)                     --------->ANAC58<---------MYB59 -------->TOE1(3)                              --------->ANAC58--------->TOE2(3) ------>GLK1(2)                                <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------>ARR11(3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <------------AtMYB77 -------ARR11(3)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <-----------GT1 ----->CCA1(1)--------->AHL20(2)          --------->YAB1  --------->ANAC55(2)         --------->MYB52(1) ----->RVE1(1)<---------AHL20(2)         <---------YAB1   <---------ANAC55(2)----------->GT1 -------->TOE2(3)                     --------->ICU4     <-------TEIL       ----------->GT1   -------   aatcttaaaattaaatttaaatatgagaaaacatgttgaacttatgataacgcacgagttacatacctaaaagacgggatgttaaatctaaccgttccag  17511900  Previous    Next  AGI:  At4g37200.1    Description:  HCF164 (High chlorophyll fluorescence 164); thiol-disulfide exchange intermediate. similar to ATY2 (Arabidopsis thioredoxin y2), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G43560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70188.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15583.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxi Range:  from: 17509615    to: 17511358    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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