Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ANAC46              <---------ANAC58                                           --------->MYB46(3)              <---------ANAC55(2)                                      ------>MYB46(1)              <---------ANAC58                                         -------->P              <---------ANAC46                                         ------>MYB83             --------------->AtSPL3                                  <---------MYB111(1)             <---------------AtSPL3                                  <---------MYB59           <---------WOX13(1)                                        <---------MYB111(2)  --------->ANAC46         --------->ATHB12   <-------GAMYB                            <---------MYB46(2)   --------->ANAC58       <-----------HVH21 <---------ANAC46                            --------->AtMYB61    --------->ANAC58       --------->LBD16   <---------ANAC58                            <---------MYB55(2)  <-------MYC3      --------->O2       <---------ANAC58                            --------->MYB46(3)  ------->MYC3     <------NtERF2--------->ANAC58                         --------->ANAC58  --------->YAB1         -    ------>NtERF2 --------->ANAC58                         --------->ANAC58 <---------ATHB12     ---- ----->ARR14(2)  --------->SPL7        --------->O2   <----------ID1<---------At4g35610  <-------MYC2 ------ARR14(2)<---------SPL7 <---------MYB46(3)      --------->ANAC46--------->MYB55(1) ------->MYC2   atttgcccccgtgattgcgtacgaattgtgtgttgttagccacgagtacttgttaaacggcaaaccattcacctacccatcatcaaaaccacatgcaatc  17421700                                                                                          --------->LBD16                                                                                         <---------ANAC46                                                                                        ------>ZmHOX2a(2)                                                                                        <---------LBD16                                                                                      --------->ARR14(2)           ----------->GT1                            --------->AHL20(2)              <---------ARR14(2)          ------------------------>ANAC81    --------->GLK1(2)                      <------MYB46(1)     --------->ANAC58            --------->AHL20(2) --------->YAB1                  <------MYB83    -     --------->ANAC58      ----------->GT1<---------ARR11(3)                        ----------->ARR10 -------->YAB1            >>>>>>>>>TBF1 --------->ANAC58                ----------->GT1<------ZmHOX2a(2) ----->WOX13(1)    ---------->DOF2      --------->ANAC58     --------->TOE2(3)    <--------P  <------   catcatcaagaaatcgaaaaaaaaagaagaagaaaaaaaatcaagaaattctaaaaataaaaacctttgaagtcgggttaagaggttggatccgggtaca  17421800                                                 --------->ATERF1(1)                                                 <------NtERF2                                                <-----------HVH21                                                <---------ATERF1(1)                                               --------->O2                                               <---------O2                                               <---------DEAR3(1)                      <---------SPL7           --------->DEAR3(1)                      ----------->HVH21    <---------LBD16                      --------->LBD16    <---------ARR14(2)           <-----------GT1          --------->At4g35610          --------->GLK1(1)         <---------ZAT2       <---------MYB52(1)      ----------->HVH21------>NtERF2      --------->LBD16--------->DEAR3(1)  --------->ARR14(2)                                      ---- --------->DOF2     <---------LBD16 <---------At4g35610                                         ----- -TEIL<---------RAP2.6(3)    <----------DOF2 --------->LBD16                             ----------->GT1   agtagagccggtatttccattcgccggacaactttgacagctcaatccggcgtcgcattcgctggtcgaactacatgtttctcccatctgtgagtaaaat  17421900                            --------->YAB1                                                         --                           <-------TEIL                                                         -----                <---------------AGL15                             ------->TEIL            --------->YAB1            <---------MYB52(1)                                   --------->ARR14(2)      <---------YAB1 ----->AHL20(2) --------------->AGL15                         >>>>>>>>>TBF1            <------ZmHOX2a(1) ---->AHL20(2)  <----------DOF2 ---------->DOF2  --------->ALFIN1<---------ARR14(2)--------->TOE1(2)-   aaaaaaacttctctgttacttttaaaagattcataaaagattagaagagaagtgtgtataagaagaagaacctcgagactgtgaacgaaggatgataaac  17422000                                     --------------->AGL15         <---------YAB1             <-----------------AGL3        <---------ARR11(3)          ----------------->AGL3        --------->ARR11(3)          <-----------------AGL1       --------->YAB1         ------->TEIL              <---------HSFB2a(2)      <---------YAB1   --------->ARR11(3)          <---------MYB46(3) -------->DOF2      <---------TOE2(3)<---------------AGL15     ------------------------>ANAC81 ---->YAB1--------->YAB1     <---------GLK1(2)     <-----------RAV1(1)                             -- -------->DAG2     ---------->DOF2  <-----------------AGL2    ---------->DOF2         ----------->GT1   ataaagctatgatcatcagattaaagaaattgaatctctccatttttggtgatttgttggagaagaaagaaacagagagaagacgatgaagttaaatgcg  17422100                                                            <---------WOX13(1)                                                          <------MYB46(1)                                                       <---------MYB52(1)                                                       <-------GAMYB                                                      <---------MYB46(3)                                                     <---------ANAC58                                                     <---------ANAC46                                                     <---------ANAC58                                                    <------NtERF2                                                    ------>NtERF2                          <---------HSFB2a(1)                                                  <---------DEAR3(1)<---------MYB46(3)     <---------HSFC1(2)                                                 <---------LBD16  <-------GAMYB            --------->HSFC1(2)                                            ---------->DOF2<-------GAMYB                   --------->HSFB2a(1)                                            <---------AHL20(2)------------>AtMYB77 --------->ARR14(2)                          *TSS             --------->AHL20(2)----------->HVH21     <---------ARR14(2)            ----------->HVH21              <---------AHL20(2)--------->ETT(2)  <-----------------AGL1          <---------ANAC55(2)          <---------AHL20(2) <---------MYB46(3) <----------DOF2          --------->ANAC55(2)          --------->AHL20(2) <------MYB83      <---------ANAC58      <-----------HVH21   <------------CBF --------->YAB1<---------AtMYB61  <---------ANAC58       <- ------->HSFB2a(1) <----------ARF1    --------->AHL20(2)<---------MYB55(1)<-----------GT1<---------GLK1(2)   aatgtttctgtcaagtgatgggagagaagattgtttgatatttaattaaaacgcggcgtttggttgacagttgttgttactttcgaatttggaatcttct  17422200                                      <---------MYB46(3)                                      <------MYB83                               --------->GLK1(2)                              <---------ARR14(2)                              <XXXXXXXXXXXXXXXXXXXXMIR167C                              --------->ARR14(2)                              <---------GLK1(2)                             <------ZmHOX2a(1)                            <---------YAB1                          --------->YAB1                      --------->AHL20(2)                      <---------AHL20(2)                                            <---------AHL20(2)                      <---------YAB1  <------MYB46(1)                               --------->AHL20(2)                --------->AHL20(2)   <---------AtMYB61                          <---------ICU4               <---------AHL20(2)   <---------MYB52(1)             <---------AHL20(2)              --------->AHL20(2)   <-------GAMYB                   --------->AHL20(2)              <---------AHL20(2)  <-----------RAV1(1)   --------->ARR11(3)      --------->ATHB12    -          --------->ICU4 --------->ICU4                 <---------ARR11(3)      <--------HAHB4      <     --------->YAB1  --------->AHL20(2)                --------->YAB1   ----------->GT1             - ===================================HOX2a_HOX2a---------->DOF2     --------->YAB1  --------->AHL20(2) ------>ZmHOX2a(2)   <---------AHL20(1)  <---------MYB46(3)    <---------YAB1  <---------ATHB12     < --------ARR11(3)    --------->AHL20(1) ---------->ID1<---------YAB1<---------AHL20(2)           ----   tgatctatagtactaatttaaaatataattaggattctgttggtcgtttaaaagtgatgatatttctaattatatggtttaatcatttaattttggtttt  17422300               <-------MYC3                                                <---------WRKY18(1)         --------->YAB1                                               --------->ICU4 -------->AHL20(1)            <---------AtLEC2                   --------->bZIP60(2) ---------ARR11(3)    <---------AHL20(2)          --------->At4g35610 <---------YAB1 -------->ARR11(3)    --------->YAB1   <-----------HVH21         --------->ANAC58         --------->ANAC46 ---------AHL20(1)    --------->AHL20(2)   <---------ANAC55(2)   --------->ANAC46        <---------LBD16 ----->AHL20(2)------->MYC3  <-------TEIL  --------->ANAC55(2)   --------->ANAC58<----------DOF2   aaaatattctatcaccatgtggaattatatgtgcatagaaatgtcatgtattatctgaaaatagaccaagtcattcttgacctctttcttctacggagac  17422400                                          <---------ARR14(2)                                          --------->ARR14(2)                                       <---------TOE2(3)                                  --------->O2<---------------AGL15                      <<<<<<<<<<<<                                  --------->ANAC46                                    <---------ICU4                               <---------REM1(2)                                  <---------AHL20(2)                             --------->ARR14(2)       ----------->GT1             --------->AHL20(2)                             <---------ARR14(2)      ----------->GT1              <---------AHL20(1)                             <---------ZAT14 ----------------->AGL1              --------->AHL20(2)                             --------->ZAT14 <-----------------AGL1       <------ZmHOX2a(1)                --------->MYB46(3)<---------O2--------------->AGL15 --------->ZAT6--------->AHL20(1)   tcagtaatatgcataagaacgactgaacgagtatacacgtcgaggttacacaataggggaaaaatgtgtaacacaaggacagaataaattagtacattgg  17422500                                                      <---------ALFIN1                                               ---------->DOF2                                              ------>ZmHOX2a(1)             <---------ALFIN1                                             --------->TOE1(3)             <------NtERF2                        <---------AHL20(2)   --------->TOE2(3)         --------->ANAC46    ------->GAMYB   <---------AHL20(2)    --------->GLK1(1)          --------->HSFB2a(2)  -------->P        --------->YAB1       <---------ARR14(2)          <---------HSFB2a(2) <---------ALFIN1   --------->AHL20(2)   --------->ARR14(2)<---------AHL20(2) <<<<<LFY ---------->DOF2                <---------GLK1(2) --------->AHL20(2)              <---------   gctcaaccccaaaaaagcccatttatattatctgtagaagacggattccttaagccccaatttatatagttccaggccccaaattgttttttttttcaaa  17422600  Previous    Next  AGI:  At4g36945.1    Description:  phospholipase C. similar to phospholipase C [Arabidopsis thaliana] (TAIR:AT3G19310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71864.1); contains InterPro domain Phospholipase C, phosphatidylinositol-specific , X region; (InterPro:IPR000909) Range:  from: 17419915    to: 17422126    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36950.1    Description:  MAPKKK21; ATP binding / protein kinase. similar to MAPKKK19 (Mitogen-activated protein kinase kinase kinase 19), kinase [Arabidopsis thaliana] (TAIR:AT5G67080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71861.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 17422568    to: 17423897    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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