Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <----------DOF2          --------->HSFB2a(2)          --------------->AGL15          <---------HSFB2a(2)          <---------------AGL15             <---------ANAC46         <-----------------AG               <---------ANAC55(2)         <-----------------AGL2             ----------->GT1         <-----------------AGL3        ------->GAMYB<----------DOF2                   --------->GLK1(2) ---------ID1    ----------->GT1      --------->MYB46(3)                              <---------ARR11(3) >ANAC58 ----------------->AGL3      --------->ANAC58                                 --------->ARR11(3) >ANAC58 ----------------->AGL2      --------->ANAC58                                --------->RVE1(1) -->GT1  <-----------------AGL1    --------->MYB46(3)                      ------->TEIL--------->RVE1(1)   aaaaacaaattactagaaatggaaatacttttgtcaaacaaccaagacgtataacttttgttttctatagattaatggacttcttaaaaatctctccatc  17413700                                                                                                 <---                                                                                        <------------                                                                                        -------------                                                            <----------DOF2         --------->GLK1(1)                                                            <---------DAG2          <---------GLK1(1)                                                         <-----------GT1           <---------GLK1(2)                                                         <---------AHL20(2)        --------->ARR14(2)             --------->CCA1(2)                        --------->YAB1               <---------ARR14(2)            --------->ARR11(3)                      ------->TEIL               <---------At4g35610---            <---------ARR11(3)                   <---------YAB1             --------->LBD16  <-------      <----------DOF2                          --------->CCA1(2)           --------->ANAC46  --------   agattaaactttgagatatacaaatacagtttttgttttcttctaaatgatatgaatattaactttatcgatttcatccgtagcagatttccattttaaa  17413800                                                                                                  <--                                                                                               ------                                                                                            <-------MYC4                                                                                            ------->MYC4                                                                                            ------->PIF5                                                                                            <-------MYC3                                                                                            <-------PIF4                                                                                            <-------PIF5                                                                                            ---------                                                                                            ------->PIF4                                                                                            ------->MYC3                                                                                            <-------MYC2                                                                                            ------->MYC2                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC55(2)        --------->YAB1                                                                     <---------TGA1a       <---------YAB1                                                                      --------->O2 --------->AHL20(2)                                                                        --------->TGA1a ------AHL20(2)                                                                            ========== ---AGL15                                                                                  <---------O2 -->AGL15                       <---------AHL20(2)                                        ----------- ------>YAB1              ----------->GT1                                     <---------ZAT14 ------- --AHL20(2)           <---------TOE2(3)                       --------->MYB52(1)<---------ANAC46  <-- ->AHL20(2)         ---------->DOF2     <-----------GT1     <---------MYB52(2)--------->ZAT14--------   taataaactatgagaaaacagataaaggttgtatattatttgttaccccaaaaaaaaaaaaaactaactacgagtagtagtttagtgtgtctcacgtgcg  17413900     --------->DAG2    ---------->DOF2  <------ZmHOX2a(1)                                                  --------->ANAC58 -------O2                                                           --------->ANAC58 ----->HVH21                                                  ----------->HVH21                     - >TOE1(2)                                                   <---------At4g35610                     - ==============bZIP_DOF                                     --------->At4g35610                   --- ->OsbHLH66                         <-----------GT1         <---------ZAT2                     ------ -->SPL7                     <---------AHL20(2)             --------->ZAT2                     ------ -------ANAC46              --------->AHL20(2)           <---------MYB52(1)                    <----- ->ALFIN1        ----------->GT1 <---------ICU4         <-----------HVH21                  --------->MYB52(1)   acgaggaaaagttttgggagagtaaaaacatttaatatttacgactagtttgaaaaaccgtgagctgacacaagctcattgctaatgctacagtaacagc  17414000                                                            ----------->HVH21                                                           <-----------HVH21                                                          <------NtERF2                                                          <---------ANAC55(2)                                                          <---------TGA1a                                                          --------->ANAC55(2)                                                          <---------ANAC58                                                          --------->TGA1a                                                          <---------ANAC58                                   <-----------GT1       ------>NtERF2                             <---------ICU4             <---------ANAC46                             <--------HAHB4             <---------ANAC58      <----------DOF2        --------->YAB1             <---------ANAC58 -------->TOE2(3)           <---------ATHB12           <------NtERF2                               -- -------->TOE1(3)          ------>MYB46(1)         ----------->RAV1(2)                          ----- ----->P                   ------>MYB83            --------->ZAT2                             <------ --->ZAT2 <-----------GT1 --------->WOX13(1)       <---------At4g35610                        ------- --->At4g35610          ------------>CBF           <---------ZAT2                          --------->AHL20(2) ----At4g35610   ----------->HVH21<-----------GT1  --------->At4g35610              --------->AtLEC2   taccttcacttttaactaaatgacagaccaatcattttaacctctgttttcttagctggcgcgtgacagacactctccctctctccatgcccataaaatc  17414100                                                                --------->bZIP60(1)                                                                --------->TGA2(1)                                                                <---------GLK1(1)                                                                <---------bZIP60(1)                                                              --------->YAB1                                                             --------->ICU4                                                             <---------YAB1      ----------->GT1                                 <------MYB83     ----------->GT1                              <---------MYB46(3) -------->DOF2                         <---------DAG2<---------AtMYB61 ---->TOE2(3)                    <-----------GT1  <-----------RAV1(1) ---ARR11(3)            *TSS  <----------DOF2  <-----------RAV1(1) -->ARR11(3)     --------->AHL20(2)    <----------DOF2<------MYB46(1)          ---------->DOF2 ------   tcaaagactgtttaaaaaaaaaaatgttttagctttaactgctttttttttgttgttggtgtaatgatatcacagagagaagaaagagaagagaagaagc  17414200                      --------->ATHB12                 --------->ARR11(3)                 <---------YAB1  --------->YAB1               --------->ANAC58              <---------TOE1(2)     <---------ATHB12             --------->CCA1(2)              ------>ZmHOX2a(1)<---------CCA1(2)          <----------ARF1             <<<<<<<<<TBF1 --------->ANAC46<---------ICU4                  -    --------->ATHB12  <------------------------ANAC81 --------->ARR14(2)                            - --->At4g35610 --------->ANAC58    <<<<<<<<<TBF1  <-----------GT1--------->WOX13(1)  ------>ZmHOX2a(1)   agagagtgatgggagataagaaattgatttcatcttcttcttcttcctcggtttacgatactcgtatcaatcatcatcttcatcatcctccgtcttcttc  17414300                                                                        ------>NtERF2                                                                      <------NtERF2                                                                     ------>NtERF2                 <-                                                                     <---------ATERF1(1)         <---                                                                    --------->DEAR3(1)       --------                                                                    <---------DEAR3(1)      <--------                                                                    ----------->HVH21   <------NtERF2                                                                   --------->RAP2.3(1) ------>NtERF2<                                                                   <------NtERF2      <---------ANAC46                                                                  --------->LBD16    --------->ATERF1(1)                                                                  ------>NtERF2     ------>NtERF2<---                         --------->ARR14(2)                       <---------ATERF1(1)<------NtERF2 <-                    --------->LBD16                              <---------DEAR3(1) <---------RAP2.3(1)                    ------>NtERF2            <---------DAG2      --------->ANAC46   <---------ATERF1(1)             <---------GLK1(2)--------->ETT(2)                   --------->LBD16   <---------DEAR3(1)    <---------ARR11(3)   <---------ARR14(2)  <----------DOF2    <---------LBD16  ------->GAMYB <----- -------->ANAC58   --------->ANAC46 <---------MYB52(1) <-----------GT1--------->ATERF1(1) <----------DOF2 -------->ANAC58  <---------LBD16 --------->HSFB2a(1) --------------------->WRI1--------->MYB46(3) <-   cgacgaaatctctcagtttctccggcatattttcgaccgttcttctcctttaccttcttactactccccggcgacgactacaacgacggcgtctttgatt  17414400              --------->WRKY12              --------->WRKY38(1)              ----------->HVH21           <---------DEAR3(1)     --------->ANAC58     --------->ANAC58                                                                             ---     --------->ANAC46                                                                             <--    <---------LBD16                                                                           <------NtERF2  --------->ZAT18          <---------At4g35610                      --------->GLK1(2)     <----------  --------->ZAT14      --------->AtLEC2                            <---------GLK1(2)     --------->ALFIN1  <---------REM1(2)   ------->MYC2                                 <---------ARR14(2)   <-------MYC3  <---------ZAT14     <-------MYC2                                 --------->ARR14(2)   ------->MYC3 --------ANAC46       <-------MYC3                                <---------At4g35610  <---------ANAC58 ---MYB46(1) --------->At5g28300                              <-----------HVH21        <---------ANAC55(2) ->ATHB12 --------->At4g35610                                --------->DREB2C(2)       <---------ANAC58 -YAB1    <---------At4g35610                                --------->DEAR3(1)        <---------O2 ---------ZAT18       ------->MYC3                         <---------At5g28300         --------->O2 ---MYB83 <---------ABI4(1)--------->At4g35610     --------->YAB1----------->ARR10     <---------TGA1a --------ANAC58    <---------ALFIN1           <---------CCA1(2)<---------MYB52(1)      --------->ANAC55(2) ----WOX13(1)<-----------HVH21     --------->HSFB2a(2)    <---------ALFIN1 <---------ANAC58 <-------- --------ANAC58 --------->PCF2     <---------HSFB2a(2)   --------->MYB46(3)<---------ANAC58 ---------   ggtgtgcacgggagcggtgacccacatgcagataactcgagaagtctcgtttctcatcatccaccgtcagattctgtgcttatgtcgaaacgtgtcggag  17414500                                          <---------ANAC46                                          --------->O2                                         --------->LBD16                                         <------NtERF2                                        --------->DEAR3(1)                                       --------->RAP2.3(1)                                       <------NtERF2                                       --------->ATERF1(1)                                       --------->DEAR4(2)                                      <---------DEAR4(2)                                      <---------ATERF1(1)                                      <---------RAP2.3(1)                                      ------>NtERF2                                     --------->DEAR3(1)                                     --------->ATERF1(2)                                     <---------ATERF1(2)                                     --------->ANAC46                                     ------->GAMYB                                     --------->RAP2.6(2)                                    --------->RAP2.3(1)                                    --------->ATERF1(1)                                    --------->ERF1                                    --------->MYB46(3)                                    --------->DEAR3(2)                                   <---------ZAT2                                   <---------At4g35610                 --------->YAB1                                   <---------ATERF1(1)                 <---------ICU4                                   --------->At4g35610                <---------YAB1                                 <-----------RAV1(2)             ----------->GT1                           <-----------RAV1(2)                --------->MYB55(2)                          <------ZmHOX2a(2)                   <---------MYB46(3)      <---------TOE1(3)  <---------ARR14(2)<-------MYC3      <---------DEAR3(1)      <---------TOE2(3)  --------->ARR14(2)------->MYC3      --------->ALFIN1                    <--- ------>GLK1(1)         <------ZmHOX2a(1)------>NtERF2       <---------AtMYB61       --------->ANAC58 -------GLK1(1)      <------NtERF2 --------->ZAT2           <---------MYB52(1)    <-------TEIL   ---- -HVH21            <---------DEAR3(1)--------->RAP2.3(3)   --------->LBD16<-----------GT1       <---- -ANAC46          --------->At4g35610--------->RAP2.3(2) <---------LBD16  --------->YAB1      <------ >ETT(1)          <---------LBD16---------->CDC5 <---------AtMYB61    --------->ICU4 --------->ANAC58   atttctctgaggttttaatcggcggaggatcaggctcagccgccgcgtgttttggtttctccggtggtggtaataataacaacgttcaaggaaatagctc  17414600  Previous    Next  AGI:  At4g36930.1    Description:  SPT (SPATULA); DNA binding / transcription factor. Identical to Transcription factor SPATULA (SPT) [Arabidopsis Thaliana] (GB:Q9FUA4;GB:O23192); similar to ALC (ALCATRAZ), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G67110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71868.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 17414124    to: 17416291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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