Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->HSFB2a(1)                                       <---------ARR14(2)                                       --------->ARR14(2)                                    --------->HSFB2a(2)                                    <---------HSFB2a(2)            <----------DOF2        <---------LBD16   --------->MYB52(1)         ------->GAMYB   <---------DOF5.7(2)       --------->MYB46(3)           <---------At4g35610  <---------WRKY38(1)      <-----------GT1             <---------At5g28300                          <  <---------WRKY12       --------->MYB46(3)       <---------ANAC46          <---------WOX13(1)      < --------->DOF5.7(2)     <---------ATHB12<---------HSFB2a(1) --------->At4g35610                    < -------GAMYB           --------->ANAC46 --------->HSFC1(2)  <---------At4g35610  --------->GLK1(2) < -DOF2   ------>NtERF2 --------->WOX13(1)<---------HSFC1(2)  --------->ZAT2 <--------P    <----------DOF2   ggggttaacggctcctttctgtctccaatcaaccgtctctggaacctccttgccgtttacagcggctgagtatttctggttgacattcttggccttagcg  17375800         ------>NtERF2         <---------ATERF1(1)         <------NtERF2       <---------ANAC58       <---------ANAC58      --------->ATERF1(1)     <---------ATERF1(1)     <------NtERF2     --------->ALFIN1     ------>NtERF2    <---------MYB46(3)    <---------DEAR3(1)    ------>NtERF2    <---------SPL7   <---------ANAC58   <---------ANAC46   --------->ALFIN1   <---------ANAC58   --------->ATERF1(1)  ------>NtERF2  <------NtERF2 --------->ARR11(3)                             --------->At5g28300  --------->ATERF1(1)                                         ----------->GT1 <---------RAP2.3(1)                               <---------MYB52(1)             <---------ZAT2 ---------RAP2.6(2)            <-------TEIL       --------->TOE2(3)    <------MYB46(1) ---------DEAR3(1)<---------ANAC58     --------------->AtSPL3------>ZmHOX2a(2)   ------>MYB46(1) ---------RRTF1(2)<---------ANAC58    <---------LBD16--------->MYB52(2)<------MYB83           <------ ---------RAP2.3(2)       --------->LBD16<---------SPL7     <------ZmHOX2a(2)    ------>MYB83 <------   atgcggcgggcgggctcagttcttgccccgaggtacaacttgcggtactcatcgttagtgagatcggtaaatttggtgagaccaagcttgtaagtagcgt  17375900                                                               <---------ANAC58              <---------ANAC46                        ------->TEIL                  <---------MYB46(3)           <---------MYB52(1)--------->YAB1    <---------AHL20(1)          <---------YAB1  ---------->ID1    <---------------------WRI1 --------->AHL20(1)     <-------GAMYB<---------MYB52(1) ---ANAC58--------------------->WRI1           --------->ARR11(3)    <---------MYB46(3)          ---- ---ANAC58<-------GAMYB    ------->TEIL <----------DOF2        <---------ANAC58   <-------GAMYB<-----   tcttgttgttttcgttgtgtagatcgatgaatcttaagttgtctttgaaaatattgaatcttttgtcttggtcgttgatgataccgttgttgttgttgtt  17376000                ------>NtERF2             <---------LBD16                                        --------->SPL7             <---------At4g35610                                  <---------SPL7             <---------------------WRI1                           <-----------HVH21        --------->ZAT14                                           <---------RAP2.6(3)        <---------ZAT14                                           ------>NtERF2      --------->LBD16                                            <---------ANAC58     <---------ANAC46                                            <---------ATERF1(2)              <--     --------->ANAC55(2)                                         <---------ANAC58              <-----    <---------LBD16                                       <---------ALFIN1                <-------GAMYB ----->MYB52(2)--------->LBD16       <---------MYB59 <---------ARR14(2)                  <---------MYB46(3) ----MYB52(1)--------->At4g35610   ------->TEIL      --------->ARR14(2)              <---------AtMYB61   agttttcccgtgttctgcggaccattgtaagtagatggacctcacttcttcatcggttctccacttgccgtccgatggaagttggagatggtcgttgatg  17376100                                                                                                   <-           --------->LBD16                                                                        <--         <---------LBD16     ------>NtERF2              <----------DOF2          <---------ANAC55(1)         ================================RAV         --------->ARR11(3)          <---------ANAC55(2)     <-----------HVH21   --------->ANAC58    ---------->DOF2                     --------->ANAC55(2) -------WOX13(1)         --------->ANAC58 ----------->GT1          <------ZmHOX2a(1)    <---------ANAC46 ----YAB1----------->RAV1(2) ----------->RAV1(1)     <---------ARR11(3)          <---------ANAC46----   atggactcatcaccggaggctaatgacacgacgacatataagagaagtaaagagagaacttttgttgaaggagccatattgttatgtgttttgtatagtt  17376200                                                                         <---------AHL20(2)                                                                        --------->AHL20(2)    <---------ANAC58                                               <------MYB83    <---------ANAC58    <---------HSFB2a(2)                  <---------AHL20(2)    <---------ANAC46    --------->HSFB2a(2)         --------->YAB1 <------MYB46(1)            <------ -----ZmHOX2a(1)       <---------LBD16    --------->ALFIN1   --------->AHL20(2)        <------MYB46(1) -------YAB1          *TSS              <-----------RAV1(1)  <---------AHL20(1)        <------MYB83 ----->MYB59--------->ATHB12 <------ZmHOX2a(1)    <-----------TBP --------->MYB59    <--------P   aggattacttgggatgatttgtttttctggaggatgagaaaactgtgggactatttataacaaaaaatttggtatttaatatttcaagttggtatacttt  17376300                                          <---------HSFB2a(1)                                          <---------HSFC1(2)                                          --------->HSFC1(2)                                          <---------DEAR3(2)                                          <---------MYB46(3)                                          --------->HSFB2a(1)                                         <---------DEAR3(1)                                        <---------ORA47(1)                     <---------WOX13(1)------------>AtMYB77                   --------->ATHB12   <---------SPL7                  --------->ICU4  --------->ALFIN1                                         --------->AHL20(2)        <---------AHL20(2) --------->AtLEC2                                  <----------DOF2     <<<<        --------->AHL20(2) --------->ANAC58                                  <---------DAG2--------->ATHB51 ----DOF2<---------AHL20(2)--------->ANAC58                     --------->LBD16     <-----------GT1   tctattacaaataaatgggaatgatggacatgcaagatggtggacggttcgatggattttttaatccgaaatttgaatactttttatttcccattattta  17376400                                   --------->ARR11(3)                 <-----------GT1                                   <---------AHL20(1)            <---------RVE1(1)                                   --------->AHL20(1)            <---------CCA1(1)                                --------->AHL20(2)              <---------ARR11(3)                 --                       ---------->DOF2  <---------ZAT18         --------->ARR11(3)                <-- <<<<<GATA-1        --------->TOE2(3)   --------->ZAT18 --------->MYB52(1)    <---------YAB1  -------   tctataacatcatcaaatttttcattaaagaacattatatattgcacaaaatactatataacgggagatatttatctgtttttattagttttaaaactaa  17376500               <---------AHL20(2)         --------->HSFB2a(2)  --------->ARR11(3)  --------->AHL20(2)             ------>ZmHOX2a(2)  <---------ARR11(3)           <---------AGP1  <---------AHL20(1)           --------->ARR11(3)                               ------>ZmHOX2a(1)  --------->AHL20(1)           <---------ARR11(3)                   <---------AHL20(2)     --------->ZAT6  <---------AHL20(2)           ------->TEIL                      --------->TOE2(3)      <---------CCA1(2) ------->AHL20(2)     ------->TEIL                             <---------ARR11(3)   --------->TOE1(3) -------AHL20(2)<---------YAB1 <---------ARR14(2)              --------->ARR11(3)   --------->TOE2(3) -->AHL20(2)  --------->YAB1   --------->ARR14(2)             <---------CCA1(2)<---------MYB59   ataatatatttcgagattataatgcatcttatggatctacaatttctccaaaacgagttttagtatatcttaaatttctgtcctaaccttatatcactaa  17376600                                                                                          --------->LBD16                                                                                         <---------HSFB2a(2)                                                                                         <-----------RAV1(2)                                                                                         --------->HSFB2a(2)                                                                                       ------>NtERF2                                                                                     <---------At4g35610                                                                                     --------->ATERF1(1)                                                                                     --------->At4g35610                                                                                     <------NtERF2                                                                                    <---------RAP2.3(1)                                                                                    ------>NtERF2                                                                                    <---------ATERF1(1)                                                                                    <---------DEAR3(2)                                                                                   <---------DEAR3(1)                                                                                   <---------RAP2.3(3)                                                                                  --------->ATERF1(1)                                                                                --------->TGA1a                             ---------->DOF2                     <---------ANAC58<---------ATERF1(1)                        <-------TEIL                             <---------ANAC58<-----------HVH21                       --------->ANAC58                 --------->GLK1(2)       <---------TGA1a------                       --------->ANAC58                <---------ARR11(3)       =====================                  ------>ZmHOX2a(1)                    --------->ARR11(3)       =====================    <---------ANAC58  <-------MYC3  <---------YAB1     <---------GLK1(2) <-----------RAV1(1)  <------ZmHOX2a(1)    <---------ANAC58  ------->MYC3  <---------TOE2(3) <---------RVE1(1)  ============================RAV   ttgtttacttgcatttcatcctcacatgcatcaaagctatggtagaagagtagaagagattttgttttcgtttcaatgttggacgtcggctccagaggaa  17376700  Previous    Next  AGI:  At4g36880.1    Description:  CP1 (CYSTEINE PROTEINASE1); cysteine-type peptidase. Identical to Germination-specific cysteine protease 1 precursor (GCP1) [Arabidopsis Thaliana] (GB:Q94B08;GB:O23195); similar to cysteine proteinase, putative / thiol protease, putative [Arabidopsis thaliana] (TAIR:AT5G43060.1); similar to COT44=cysteine proteinase homolog [Brassica napus, seedling, rapid cycling base population CrGC5, Peptide, 328 aa] (GB:AAB23155.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (Inter Range:  from: 17374455    to: 17376222    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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