Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <-----------TGA1                                                          <---------O2                                                          --------->ANAC58                                                          --------->ANAC58                                 <------ZmHOX2a(1)        --------->bZIP60(2)             ------>ZmHOX2a(1)                                 ----------->GT1          --------->ANAC55(1)            --------->TOE2(3)                        --------->ALFIN1                  --------->TGA1a                ------------                      <---------ANAC58                    <---------ANAC55(2)            <-----------                      <------MYB46(1)                     --------->ANAC55(2)           -------------                      <---------ANAC58                    <<<<<<<<<<HY5                 <------------                      <---------ANAC55(1)                 --------->ANAC46              ------------- ----->bZIP60(1)      <------MYB83                        --------->O2                  ------------- ----->TGA2(1)        <---------ANAC46   <----------ID1  <-----------STF1    <-----------GT1 ------bZIP60(1)     --------->MYB111(1) ----------->GT1<---------ALFIN1  <---------ICU4------------- >ANAC46       <----------DOF2  ----------->GT1 <-----------RAV1(1)      --------->AHL20(2)   catcacatttgttatctctttattaggtgtgcaaaggataaaaacgaaaaatgtggcaacacgtcattgtttcaaatatttactaagttttccttatata  17346400                                                                                                   <-                                                                                              -------                                                                                              <------     <-----------GT1                                                                         --------  <---------ICU4                                                                             -------- <---------YAB1                                                                              -------- --------->ICU4                                                                            <---------ALFIN1 --->AGL15                                                                                <------NtERF2 ----AGL15                                                                               ------>NtERF2 ---->AGL2                                                                              ----------->HVH21 -----AGL3                          <---------YAB1                  ----------->GT1     --------->bZIP60(1) ---->AGL1                        <-----------GT1               --------->YAB1          <---------bZIP60(1) ---->AG                       <---------ICU4                --------->YAB1          --------->ALFIN1 ---->AGL3            <---------CCA1(2)             <-------TEIL<-----------GT1    <-----------RAV1(1)   gacattattacatctcaaaaaatcatctcttcaacattaccatttactactagatgcaagagataataacaagataaaacagaaaatgtggcgacacgtt  17346500                                                                                        <---------MYB46(3)                                                              --------->ARR11(3)       <---------MYB52(1)                                                              <---------ARR11(3)      <-------GAMYB                                                             <---------CCA1(2)        --------->At5g28300                                                            <---------AHL20(2)       <---------MYB46(3)   <----------DOF2    ----------->GT1                   <---------RVE1(1)            ----------->GT1 ----------GT1      <---------ANAC46                    <---------CCA1(1)          --------->SPL7 >MYC3             <---------MYB52(1)                  --------->ARR11(3)        <---------SPL7 -MYC3 <----------DOF2<---------ANAC46                 <---------AHL20(1)   <---------AHL20(2) ->ANAC58         <-------GAMYB  --------->YAB1        <---------ARR11(3)  --------->AHL20(2) ->ANAC55(2)     <-----------RAV1(1)  <<<<<<<<<<WRKY63 --------->AHL20(1)  <---------AHL20(2)<------- ->ANAC58  <---------AHL20(2)<-----------GT1       --------->YAB1<----------DOF2 ----------->HVH21<--   tttgcctttctttttaattctgttgtgtaatttactcatagtcaaataagttatcaagatattatatctttttaaaatttaatcggacggttattgaggc  17346600                                     <---------MYB52(1)                               --------->ALFIN1                              ------->MYC4                              <-------MYC4                              ------->MYC2                              <-------PIF5                              ------->PIF5                              <-------MYC2                    =======================================                              ------->MYC3                --------->ANAC58                          <                              <-------MYC3                --------->ANAC58                         --                             --------->O2               <-----------------AGL1                     --                             --------->PIF3(3)   --------->YAB1                                  ----                             <---------PIF3(3) ------>MYB83  ---------->DOF2                     ----                             ===========================================bZIP_DOF                 <---              ------>MYB46(1)===========================================bZIP_DOF                 ====   --------->ANAC58          <---------O2 <-----------GT1 --------->ANAC46                   <-------   --------->ANAC58          --------->TGA1a<---------ANAC55(2)                              -------- ---------->DOF2--------->TOE2(3) <---------ORA47(1) --------->YAB1  <---------ANAC46        <------- ======================================bZIP_DOF------>MYB46(1)---------->DOF2                -------- --TOE2(3)    ------>MYB83   <---------TGA1a--------->ANAC55(2)--------->DAG2<---------AHL20(2)  ---- ----NtERF2  ----------->RAV1(1)--------->WRKY12<---------ATHB12    <------NtERF2           <--------   atcgaaagctatcaccaacataaatctatccacgtggacggtagtcacctatcaatattcacgaaaaggcagcgtttattgaatttctcgtgatatatct  17346700  <---------ANAC46  <---------TGA1a  --------->TGA1a  <---------ANAC58  --------->O2  <---------O2  <---------bZIP60(2)  <---------ANAC55(1)  <---------ANAC58 ===========bZIP_DOF ---------TGA2(2) --------->TGA1 --------->HVH21 ----->ZAT2                                                              ----------->TBP ----->At4g35610          <---------TOE2(3)                            <---------------AGL15 ------At4g35610      --------->ARR11(3)                              <-----------------AGL3 =========================RAV                                         ----------------->AGL3 --ARR11(3)           <---------ARR11(3)                             <---------ANAC46 ->ARR14(2)    <------NtERF2 <<<<<<<<<MYB98                          <---------ANAC55(2) --ARR14(2)   ----------->RAV1(1)  --------->TOE2(3)            <---------MYB46(3) ->ARR11(3)  <---------TCP15(1)   --------->ANAC46        --------->ARR11(3) ------->RAV1(2)<---------ALFIN1  ----------->GT1         <---------ARR11(3)     <---------ZAT18 -CCA1(2)    --------->PCF2<---------YAB1 --------->AHL20(2) <----------DOF2---------->DOF2   gctgacgtgtataaggccccacaagatttatgttaaacgtaaaattaaaactgtaacagagaactttggttacctatataaagctcgctcttgctgtttc  17346800                                                               <---------ANAC46                                                               <---------ANAC58                                                    --------->GLK1(1)                           -----                                               <---------HSFB2a(2)     <------------------------ANAC81                                               --------->HSFB2a(2)   <---------AHL20(2)         <----                                              <---------LBD16  <---------ANAC58           --------->ICU4         *TSS                              <----------DOF2    ---------->ID1       <---------MYB52(1)   attttttcaagtagtaactgaaatcgaattcattttcttctcttcctttctgggatttcgatttttcgtattttttttttgttctgttcgtcatggtgat  17346900                                                  ---------->DOF2                                              <------NtERF2                                              --------->ATERF1(1)           ---------->ID1                                             <-----------HVH21        --------->SPL7                                             ------>NtERF2          <---------SPL7<<<<<<<<<TBF1   ---                                             <---------ATERF1(1)   <---------ANAC58            ------        <----------DOF2<---------MYB46(3)   --------->DEAR3(1)     <---------ANAC46        <--------- ---->ICU4           <---------MYB52(1)     <---------DEAR3(1)     <---------ANAC58    --------->TOE2(3) -----YAB1     <---------SPL7          --------->MYB52(1)         --------------->AtSPL3<---------MYB52(1)   gatgaagaagcttttgtcgaaccgtttgttcaatatgtcaaaaacggcgtcgcaaagtctcatgaactgtcgtacttcgtcttcttcttcgttagccatg  17347000                          --------->ANAC58                          --------->ANAC58                      ========================HOX2a_HOX2a                                   ---------                      <------ZmHOX2a(1)                                                  ------------                --------->ARR11(3)                                                 <---------GLK1(2)            ---------->DOF2     --------->ATHB12       ----------->HVH21         <---------AHL20(2)           ------>ZmHOX2a(1)   <---------YAB1        --------->CCA1(2)           --------->AHL20(2) ------>ZAT18   <---------ARR11(3)     ------>ZmHOX2a(2)<-----------GT1          <---------AHL20(1) --->AtLEC2===================================HOX2a_HOX2a<---------TOE2(3)       --------->AHL20(1) ------------WRI1--------->CCA1(2)<---------WOX13(1)<---------ARR14(2)          --------->AHL20(2)  <   cgaactagggttcctaaagatataggagaagccacgattgatccagagcctggagatttgacgatttctcagaggtttttgaataaattctccatgaatg  17347100                                                                             --------->ARR14(2)                                                                             <---------GLK1(2)                                                                             <---------ARR14(2)                                                             --------->CCA1(2)                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                 --------->GLK1(2)       <---------------------WRI1    -------------- >ATHB12         --------->ARR11(3)               ---------->DOF2         ------>ZmHOX2a(2) --->AGL15       <---------ARR11(3)            --------->TOE1(3)        <---------ARR14(2)   <------- ---------WOX13(1)        <---------LBD16    --------->GLK1(2)          --------->ARR14(2)  ---------   ggattgatacgacttcgaagatgtctattggggagagtctgatggagaagcttaaagaaatggatatgaacaaggatcggattcgattagacggactttc  17347200                                    <---------TGA1a              <------ZmHOX2a(2)                                    --------->O2               --------->GLK1(1)                      <---------ANAC58                    <---------At4g35610       <---------At4g35610       <------ZmHOX2a(1)            <---------ANAC55(2)   --------->At4g35610       <---------ZAT2   --------->LBD16    <---------ANAC58                    <---------ZAT2            --------->At4g35610 ->AtSPL3       <---------MYB52(1)  <---------ANAC46      --------->ZAT2           ------->TEIL   <-- ---DOF2  <------ZmHOX2a(1)    <---------AtLEC2          ----------->RAV1(1)<---------AHL20(2)   ---- >HSFB2a(1)    <-----------HVH21    <---------O2       --------->At4g35610<---------YAB1        -----   tcatccgaaggaggagacgttagggcttactgtgcaagacgtgaagaagttgctaagagcagcagagatcgaagttattaaaacgaagctgatggagaca  17347300  Previous    Next  AGI:  At4g36820.1    Description:  transcription factor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22909.1); contains InterPro domain Protein of unknown function DUF607 (InterPro:IPR006769) Range:  from: 17346809    to: 17347998    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version