Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ANAC58                                                          --------->ANAC46                                                          --------->ANAC58                                                         ------->TEIL                                                      --------->ANAC58      <---------ARR11(3)                              --------->ANAC58      --------->ARR11(3)                        <-----------HVH21 ---->DOF2                           <---------ANAC46<-------MYC3                           --------- --------AGL15         <<<<<<<<<RAP2.2         --------->ANAC46                <-----------GT1 -------->AGL2        <---------TOE2(3)      <---------ALFIN1             <---------ARR11(3)<-------- -------->AGL1 ---------->DOF2     <---------ANAC46  ------->MYC3         --------->ARR11(3)<--------   agcagaaacatcttaaataaagtttagattgttcttgatgtgtgttcacacttcacatgcacgtagatgataccaagattttaactaggcttatgcgtat  17316000                    ---------->DOF2     <---------ARR11(3)  <---------HSFB2a(2)                                                      --------->ANAC46  --------->HSFB2a(2)                 --------->YAB1                      --------->LBD16 >ANAC55(2)     <----------DOF2  --------->ANAC46                        --------->HSFB2a(2)     <--- -ANAC58<----------DOF2         ------->TEIL                             <---------HSFB2a(2)     ---- -ANAC58<---------DAG2       --------->AtLEC2                   <-----------GT1              --------   tagtcgagaactttttttcttttaaagactcatgcacataacataatccacttgaattcttatatataacttcttccacaaaatttgtgaggggataaag  17316100                                         <---------YAB1                                   <----------                                        --------->AHL20(2)                                --------->DAG2                                        <---------AHL20(2)                              ---------->DOF2 ------ARR11(3)                ------>MYB83                                          --------->AHL20(2) ----->ARR11(3)                ------>MYB46(1)             ------->TEIL          --------->AHL20(2) -->DOF2   --------->AHL20(2) <---------ALFIN1     --------->GLK1(2)          <----------DOF2--------   aacttcggacaaattaaaactaaaaacaaaacccacttctatttttataagaaaatccatgaattttgggttttgtcgaacttttaaataaaaaggtatg  17316200                                                                  <---------ZAT14 --------->ANAC58                                                                  <-------TEIL    --------->ANAC58                          <------ZmHOX2a(1)           --------->ETT(2)            --------->ANAC46       --------->MYB46(3)<----------ID1             --------->REM1(2)           ---------->DOF2     < -----AtSPL8          ---------->DOF2               <---------ZAT14           --------->CCA1(2)    -- ->CCA1(2)   <---------ICU4                         --------->ZAT14  <---------At4g35610    <--------   aaatttcgaacaaactaattacaaaaaaggacaaacctggttgtactatctgagtgtagacatcagggtacagttgagagataaaagccatgttctgatc  17316300                                      <---------AHL20(2)                                    <----------DOF2      <---------ZAT14    ------>ZmHOX2a(2)                                                 --------->ARR11(3)      --------->REM1(2) --------->GLK1(1)                                      <---------HSFB2a(2)   <---------ANAC46     <---------GLK1(1)                                     <---------LBD16 <---------At5g28300   <---------AGP1 --------->AHL20(2)                      *TSS         <---------ARR11(3) ---------ALFIN1       --------->ARR11(3)          <---------DAG2         <-----------RAV1(1)   <---- ------->MYB46(3)      <---------ARR11(3)          <----------DOF2        <---------MYB46(3)    <---- -YAB1--------->ZAT14 <---------CCA1(2)      ---------->ID1            --------->ALFIN1<------ZmHOX2a(1)   atccaccgtgtagttcatgttcttggatctctctctgtctttaatttgtctcactttttatgaaatgtgagaagtgttgttggggaagaggaagacctat  17316400                                                                                                    -                                                                                           --------->ANAC55(2)                                                                                           --------->ANAC58                                                                        <----------DOF2    --------->ANAC58                                                                   --------->ALFIN1        <---------ANAC55(2)                                                                 <---------O2             <---------LBD16                     --------->ANAC58                            <-----------RAV1(1)     <-----------GT1                     --------->ANAC58                            <---------ANAC46        --------->MYB52(1)                 <-----------HVH21                               ==================bZIP_DOF--------->ANAC46              <------MYB46(1)                                    <---------TGA1a     --------->AHL20(2)              <------MYB83                                       <---------bZIP60(2) <---------AHL20(2)       <------ZmHOX2a(1)       <---------AHL20(2)             ------>ZmHOX2a(1)  <---------YAB1  <--- -----YAB1   --------->MYB111(1)                            ----------------->AGL1  --------->AHL20(2) -----ATHB12<--------P    --------->ICU4      <---------YAB1<-----------------AGL1 <---------AHL20(2)   gatttataaggagagtaggtgtcaagaaatgatttttttttttgggttatgaaatgtcattttcctgatgtgggcttcttgttattttaaattacggaat  17316500                                    ---------->DOF2                               ------>MYB46(1)                                   <---------AHL20(2)            <---------AHL20(1)                                  <---------AHL20(2)             --------->ARR11(3)      <-----------GT1                                  --------->AHL20(2) ---------->DOF2              ------>MYB83                              <---------AHL20(2)   <---------AHL20(2)        <-----------GT1     <---                              --------->AHL20(2)   --------->AHL20(2)   <----------DOF2--------->YAB1                            --------->YAB1  --------->At5g28300  --------->AHL20(1) <----------DOF2 -------->ZAT6          <------ZmHOX2a(1)  ----------->GT1       <---------ARR11(3) --------->TOE2(3) --------GT1          <---------TOE2(3) <------ZmHOX2a(1)   ----------->GT1<-----------HVH21     <---   taccactggacgtgatttagtacttaggaatattaattaaaaggacagtgaaattaaaagagaagaaaatatttctttgtcaccaactttaatactgttt  17316600                                                                                    <-------PIF5                                                                                    <-------MYC4                                                                                    ------->PIF5                                                                                    <-------MYC2                                                   --------->ATHB12                 ------->MYC4                                               --------->ATHB12                     <-------PIF4                                             <-----------TGA1                       <-------MYC3                                             <-----------HVH21                      ------->MYC2                                            --------->ANAC58                        ------->PIF4                                            ===============================bZIP_DOF ------->MYC3                                            --------->TGA1a                        --------->O2                                            --------->bZIP60(2)                    --------->ANAC58                                            --------->ANAC46                       --------->TGA1a                                            <---------ANAC55(2)                    <---------O2  ----                                            <<<<<<<<<<HY5                          ==================                                            --------->ANAC58                       <---------TGA1a                                            --------->ANAC55(1)                    <---------ANAC55(2)                                            --------->ANAC55(2)                    --------->ANAC55(2)                                            ===========================================bZIP_DOF------                             <---------ANAC55(2)   --------->YAB1                  --------->ANAC58 <---------ANAC55(2)         --------->ANAC55(2) <---------WOX13(1)         <----------DOF2    <----- <---------ANAC58       ---------->DOF2     <---------O2               ======================bZIP_DOF <---------ANAC58 --------->ANAC46          --------->O2<------ZmHOX2a(1)   =================bZIP_DOF --------->ANAC55(2)    ==============================bZIP_DOF         ---------->DOF2         ------ ------ANAC58   --------->ZAT6             <-----------STF1     ---------->DOF2  <------------OsbHLH66 ------ANAC58 ----------->RAV1(1)         <---------ALFIN1      =============================bZIP_DOF   catgcgtaatacaaaacaacactaaacaaagacgtattctttcaacacgtcattgataggaacatgaaaagtcgaaagctttggcacgtgaacacactaa  17316700                                                                  --------->HSFB2a(2)                                                                  <---------HSFB2a(2)                                                            <---------ANAC58                                                        <---------GLK1(1)                                                       <---------ARR14(2)                                                       <---------ARR11(3)                                                       <---------GLK1(2)      <-----------GT1              --------->WOX13(1)  --------->ARR14(2) ------->GT1                     <---------ATHB12      --------->ARR11(3) =====bZIP_DOF      <---------AHL20(2)               <---------TOE2(3)                            --- ---->DOF2          --------->AHL20(2)       ----------->GT1<---------ANAC58                  <------ ----ZAT14          --------->AHL20(1)    --------->YAB1--------->CCA1(2)                <---------YAB1 --->ZAT14    <---------MYB59  --------->WOX13(1)    ----------->ARR10                 --------->YAB1   agtgaatttttcattaccaaaataaaatgacataaatcaatctatcgtagttaataagatttgcgagtctagaaaactatatagtagtatgacaattggg  17316800                                                                                               ------                                                                                               ------                                                                                             --------                                                                                            <--------                                                                                          --------->WOX13(1)                                                                                        --------->MYB46(3)                                     --------->GLK1(2)                              --------->MYB46(3)           --------->YAB1 <------MYB83                                              --------->ANAC58           <---------ICU4 <------MYB46(1)                                           --------->ANAC46          --------->ICU4 --------->MYB59                        <---------At5g28300 --------->ANAC58 ------>ALFIN1--------->YAB1     --------->YAB1          <------ZmHOX2a(1)        <---------ALFIN1 ---LBD16 <---------ATHB12----------->GT1         <---------ATHB12              ------>ZmHOX2a(1)   gaggggagaccaataatcagagactatttggtaaatgagaatgtgatgtccaatggagaggacattcaccggtctcaatgtcctccacgacccaatcaag  17316900  Previous    Next  AGI:  At4g36740.1    Description:  ATHB40/HB-5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor. Identical to Homeobox-leucine zipper protein ATHB-40 (ATHB-40) [Arabidopsis Thaliana] (GB:O23208); similar to ATHB21/HB-2 (homeobox-2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G18550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22892.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Homeobox; (InterPro:IPR Range:  from: 17314563    to: 17316378    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version