Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ARR14(2)                  <---------ARR14(2)                  --------->GLK1(1)                                              ------>MYB46(1)                  --------->GLK1(2)                                              --------->MYB52(1)        ------->GAMYB                 --------->YAB1                             ------>MYB83      --    <---------WRKY12         ------>ZmHOX2a(1)   <---------ICU4                --------->AtMYB61<----  <-----------HVH21   <---------ALFIN1<-----------GT1                          <---------MYB59<------ ----->ZmHOX2a(1)<---------GLK1(2) --------->ANAC46    <---------MYB59 ------>ZmHOX2a(2)      -------   tcctcgtcaacccaattcagaatcccacttcctatacaaatcacaatccaattttgacctaaaccgaaactgatctgtaaaccaaaccgaagaaatttaa  17300000                    <---------DOF5.7(2)                    --------->MYB52(1)        <---------ANAC55(2)        --------->ANAC55(2)                                                                    <----- --------->GT1     <---------WRKY45                                                          -------- -------GT1------->TEIL       --------->ARR11(3)                                             ------->TEIL ---AHL20(2)       <---------WRKY12  --------->ETT(1)     --------->At4g35610  <---------TOE1(2) -->AHL20(2)       <---------WRKY38(1)         >>>>>>>>>TBF1       <---------YAB1           <--------   acagtttattatgtaccagagtcaacgaagaagaccatgtcggaatgaagaagaagagggagcaaaattgtgtttggctccaacgttatggaatgtatct  17300100                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                            --------->AGP1                                            --------->ARR14(2)                                            <---------ARR14(2)                                  -----                                            <---------ARR11(3)                                -------                                            --------->ARR11(3)                          --------->TOE2(3)                                           <---------GLK1(1)                         <----------DOF2    --------->PCF2           <---------ARR14(2)                        <------MYB83 ------>ZmHOX2a(2) --------->MYB59             --------->ARR14(2)                        <------MYB46(1)  --------->YAB1 ----ANAC46                 <---------RAP2.6(3)                    --------->ATHB12 ================= ->ARR11(3)    --------->DEAR3(1)         ----------->ARR10   --------->HSFB2a(2) <---------ARR11(3) -CCA1(2)     --------->ANAC46       <---------MYB46(3)       <---------HSFB2a(2) --------->ARR11(3)   tgtaaggtcccattccaccgcatccattgccgatttgaacggttgagatctgtccaaacttcgtctcgaagattggtttccattgatctttcttaatcag  17300200                                   <---------bZIP60(1)                 ----------->RAV1(1)  <---------ANAC46              --------->ANAC58     --------->O2              --------->ANAC58     --------->TGA1a              --------->ANAC55(1)  <---------TGA1a              --------->ANAC46     --------->bZIP60(2)      --------->ANAC58             --------->bZIP60(1)      --------->ANAC58             <---------bZIP60(2)               --------->MYB46(3)  <------ZmHOX2a(1)                --------->DEAR3(1)              --------->MYB52(1) ---->At4g35610--------->LBD16     <---------O2                  --------->MYB46(3) <------ZmHOX2a(1) -->YAB1     <---------LBD16    --------->DEAR3(1)        ------>NtERF2       <---------ZAT14 ========HOX2a_HOX2a   --------->RAP2.6(3)             ------>ZmHOX2a(1)      --------->ZAT14   aagaggagacgaaaacccgcaacatgaaggcacagcgacgtcgtattcttcagactcctccgacttagccaacgactcagtgcagaggaacaagagaacg  17300300                                         --------->ZAT18                                         --------->ZAT14                            --------->GLK1(2)                            <---------ARR14(2)                                              ---------                            --------->ARR14(2)                                  <---------AHL20(2)                           <---------CCA1(2)                              ----------->GT1  ----------                           --------->GLK1(1)                           *TSS    --------->AHL20(2)----            --------->ALFIN1<-----------ARR10  <---------MYB52(1)     ---------->DOF2  <---------TOE1(2)  >>>>>>>>>TBF1         --------->LBD16  <---------ZAT14           --------->AtLEC2 --------->YAB1 <-   agaagaagaacagagagtggcaataccgcaaatctagtcattgtgctctgtttttttttttgttattcaatgcaaagcgtattaaatcgtagtatcatat  17300400                                                      =========================bZIP_DOF                                                     <---------ANAC58                                                     <---------ANAC46                                                     <---------ANAC58                                                 ------->PIF5                                                 ------->MYC2                                                 <-------MYC2                 <----------DOF2                                                 ------->MYC3         <-------MYC2                                                 <-------MYC3         ------->MYC4                                                 <-------PIF5         ------->MYC3                                                 <-------MYC4         ------->MYC2                                                 ------->MYC4         <-------MYC4                                                <---------O2          <-------MYC3                                                <---------PIF3(3)    <---------ANAC55(2)                                                <---------bZIP60(2)  --------->ANAC55(2)                                                --------->O2         --------->TGA1a                                                =================bZIP_DOF     <---------DAG2                                                --------->PIF3(3)    <---------O2     ------>NtERF2                                                --------->TGA1a      ====================bZIP_DOF                                                =================bZIP_DOF    <---------ANAC58 <------                                                --------->ANAC46     <--------ABF1 <---------At4g35610 >YAB1                                          <---------TGA1a      --------->O2  --------->At4g35610 ------->AGL3                               <----------------PIF3(2) ====================bZIP_DOF ------>DOF2                               --------->YAB1    <---------ANAC46<---------ANAC58<-------TEIL --------TOE2(3)                      ------------>CBF<----------DOF2<---------TGA1a ----------->HVH21   aaaggaatgagagaagaaacagagagaggttgtagagtcggacaatgaccacgtggcttaatggtttggacacgtgtttgctttacgctgacaagtgcat  17300500                                                                                     <---------YAB1                                                                   <---------ANAC55(2)                                                             <---------ANAC46  <-----------RAV1(1) <-                                     ---------->DOF2   --------->ARR11(3)  <---------YAB1          <-                           --------->At4g35610         --------->ARR14(2)--------->YAB1   <---------TOE1(3)         <-----------GT1   <---------At4g35610         <---------ARR14(2)<---------ICU4   <---------TOE2(3)    <----------DOF2        ------>NtERF2               --------->GLK1(2)<---------YAB1   <---------DOF5.7(2) ---AtLEC2               <---------RAP2.6(2)     ----------->GT1   --------->ANAC55(2)--------->YAB1   gggttcctttgttaccaaaaacaaattgccgctaaaatacaaagctcgagtttgaaaaatctggctgataagtgatcataactgttgatgataacgttgt  17300600                                    ----------->RAV1(1)                                   --------->ANAC58                                   --------->ANAC58            ---------->DOF2        ----------->HVH21         ----------->RAV1(1)      --------->LBD16       --------->ANAC58  --------->CCA1(2)              --------->ANAC46       --------->ANAC58  <---------At4g35610 --------TOE2(3)      ----------->GT1       ----------->GT1<---------ARR14(2) --------TOE1(3)  <-------TEIL  <---------LBD16    ----------->HVH21 <---------bZIP60(1)   gaaggtatgaacaacaaagatgcatagtttatatcgcgcgacagtcgagttaaatgacacggttccaagtgatggcagttcatagttttcatcgatgcga  17300700                --------->ARR14(2)                --------->MYB52(1)                <---------ARR14(2)               <---------GLK1(1)           --------->AtLEC2                                             <-------MYC3         <---------AtLEC2                                               ------->MYC3     --------->CCA1(2)                                             <-----------GT1     --------->GLK1(1)                    <-----------GT1        <---------YAB1    <---------ARR14(2)           <---------YAB1                <---------ICU4                    ----    <---------ARR11(3)         --------->GLK1(1)               <--------HAHB4                    ----    --------->ARR11(3)         --------->CCA1(2)               --------->ATHB51                  ----    --------->ARR14(2)         <---------GLK1(1)              --------->ICU4                    <----  <---------TOE2(3)           --------->ARR14(2)              <---------YAB1  <---------HSFB2a(2)<---  ----------->ARR10           <---------ARR14(2)           <---------YAB1     --------->HSFB2a(2)<---   tattgagatatgcatgcatatcggtattagtggatatgcttattttccaatactatgtattagcattattaacatgtgttttggaaatgaaaactcgaga  17300800                                           --------->ANAC55(1)                                           --------->ANAC55(2)                                           --------->ANAC58                                           --------->ANAC58                                           <---------ANAC55(2)                                          --------------->AtSPL3                                          <---------------AtSPL3                                      ----------->HVH21                                    <---------LBD16                                 --------->ARR11(3)                                --------->YAB1                                <---------ICU4                                -------->HAHB4                               --------->ICU4 ----->ARR11(3)                <---------YAB1                                                   <---- ----->GLK1(2)             --------->ARR11(3)                                                   <---- ----->ARR14(2)           <---------At4g35610                             --------->ANAC58    <------ -----GLK1(2)     --------->At4g35610--------->ANAC58                ----------->HVH21      --------- ------ARR11(3)   <---------At4g35610<---------ANAC55(2)     ----------->GT1                --------- ------ARR14(2)   ----------->RAV1(2)--------->ANAC58    <---------TOE2(3)--------->ANAC58  <--------   atctttcacatttcaatttcatctgggcagataatgatcacggacacgtactgtacatcaaggttgaaaatttgacaggcccaattgtccatagtggttg  17300900  Previous    Next  AGI:  At4g36700.1    Description:  cupin family protein. similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to unknown [Petunia integrifolia subsp. inflata] (GB:ABU45197.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 17298204    to: 17300371    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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