Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------ATHB12                                                                                      ------>MYB83                                                                                   --------->ANAC46                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                 --------->ANAC46     <---------DAG2           --------->AHL20(2)                             <-----------GT1 ------->GAMYB     <----------DOF2       ------>ZmHOX2a(1)        --------->TOE1(3)   --------->YAB1------>MYB46(1)  <---------ALFIN1        --------->TOE2(3)      --------->ARR14(2)     --------->AHL20(2)--------->MYB52(1) ------->REM1(1)  ------>ZmHOX2a(1) <----------ID1  --------->TOE2(3)  <<<<<<<<<ARR2--------->AtMYB61   ttcaccactttctctctctcctccatttcctaaaaaataccacaaattccaaaacctcaaaaaccagactacaatcaaattacacaccaaatcaaccgaa  17287000                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                  <-------                                                         --------->AGP1                     ---------                                                         <---------AGP1                    --------->MYB52(1)                                                         <---------ARR14(2)          <---------MYB52(1)                                                         <---------ARR11(3)         --------->LBD16                                                         --------->ARR14(2)        --------->LBD16                                                         <---------ARR14(3)       <---------LBD16                                                 <---------GLK1(1)             --------->GLK1(1)                                                 --------->GLK1(1)             <---------GLK1(1)                        --------->ARR14(2)      <---------GLK1(2)             <---------ARR14(2)                     --------->YAB1   --------->YAB1     --------->ARR14(3)   <---------GLK1(2)------                   -------->P        <---------TOE2(3)   --------->ARR11(3)   --------->ARR14(2)                 --------->MYB46(3)  <---------YAB1     <---------CCA1(2)    <---------At4g35610           ----------->GT1       <---------GLK1(2)     ----------->ARR10  <-------TEIL<--------P   atagaaacagagagagtaaacaaccagaacgtcgagattatcgtagttcggaatccctagatcttccgataaccggttcagattcccggtagataaccgg  17287100         <------NtERF2              --------->ANAC58        <---------ARR11(3)    <---------bZIP60(2)             --------->ANAC58     --------->HSFB2a(2)    <---------DEAR3(1)            ---------->DOF2        <---------HSFB2a(2)  --------->MYB52(1)         --------->ANAC58        ------->GAMYB ----------->HVH21           <----------ID1          --------->ANAC58 ----------->TGA1            --------->ANAC58        --------->ANAC58 --LBD16------>NtERF2       --------->DAG2       <---------MYB52(2) >MYB52(1)                 ---------->DOF2      <---------At4g35610                                 < --->LBD16              --------->AtMYB61       --------->At4g35610                         <--------   agagtgacggtgccagtaaacatcgaccaaaaagccaaaagcaaaatcgcagcaaacgcccagaacttatatcgacctcttccaaacaagaccgagtcag  17287200                                                            <------NtERF2                                                           ------>NtERF2                                      <---------SPL7     <------NtERF2                                     --------->DEAR3(1)  --------->ATERF1(1)                                    <------NtERF2       <---------ATERF1(1)                                    --------------->AtSPL3<---------DEAR3(1)                                   ------>NtERF2        <---------SPL7                  ------>ZmHOX2a(2)                                  <---------DEAR3(1)   <---------DEAR3(1)             <---------ARR11(3)                                  --------->DEAR3(1)  <------NtERF2          ==================HOX2a_HOX2a                                 --------->ATERF1(1)<---------DEAR3(1)       ------>ZmHOX2a(1)             --------->ARR14(2) <-----------HVH21<---------DEAR3(1)       =====================HOX2a_HOX2a ----------DOF2 --------->ANAC46<---------ATERF1(1)<------NtERF2          ------>ZmHOX2a(1)       <-- ---HVH21    <---------ARR14(2)--------->ANAC46 <------NtERF2      ------->TEIL--------->REM1(1) ----   agctttccttcttcgaattcgccatagctgttcccgtcgccgtaccagtcgtcgtcgtcgtcggcaatgcatcgtcctccttcatcttgatctcaaatac  17287300                                                                                                  ---                                                                                                  <--                                                 <---------At4g35610                             <---                                                 --------->ZAT2                                  <---                                                 --------->At4g35610                            <----                                           <-----------ARR10                                    -----                                           --------->GLK1(2)                                    <----             --------->ARR11(3)            <---------ARR14(2)                                   <----             --------->GLK1(2)             --------->ARR14(2)                                   <---- --------->YAB1    <---------ANAC58       ------>MYB83                                         ------ <-----------GT1   <---------ANAC58       ------>MYB46(1)                                     <------ -------ICU4--------->YAB1              --------->AtMYB61                  <-------TEIL  ---------->DOF2 ----->ICU4<---------ATHB12          --------->ZAT6   <---------ANAC46   <---------ARR14(2)  --------   taattacaactcaataatcttgcttagtgagtgatgctaacaccaaatctgagctctcgtgaatcgatttcagtagattcagttcaattgggaaagtgtc  17287400       ----------->GT1 ------>At4g35610                                                                            <------- ----NtERF2                                                                                 --------- ------RAP2.3(1)                                                                      <---------STY1(2) ------DEAR3(2)                                                                  --------->ATHB12 -----RAP2.6(2)                                                    --------->ZAT6<---------ICU4 ---->ETT(1)                                             <---------REM1(2)       <--------HAHB4 -----RAP2.3(2)                                          --------->ZAT14     ----------------->AGL2 -----RAP2.3(3)                  *TSS  --------->AHL20(2)<---------ZAT14     ----------------->AGL3 -----DEAR3(1)             --------->TOE2(3)    --------->ZAT14 <---------ZAT14  --------->ATHB51 --->RAP2.6(3)             <----------DOF2      <---------ZAT18 <---------ZAT18 --------->ICU4 -----HVH21             <---------ARR11(3)      <---------ZAT14 --------->ZAT14 <---------YAB1<------ ->ALFIN1               --------->ARR11(3)    --------->At4g35610  --------->ANAC46   --------->STY1(2)   ggctcgattttgttaaatctgagagagaactttaaaaaaaaaaaaatcagttcactctcttcacagttcacactactgggccattattagctagtaattg  17287500                                                             <---------WRKY18(1)                                                          <---------ICU4                          <---------YAB1           <---------ANAC58                            ------                      <------------CBF             <---------ANAC58                        --------->ANAC58                    <---------AHL20(2)            --------->SPL7                      --------->ANAC58                 ------>ZmHOX2a(2)                <-------TEIL            <---------AHL20(2) --------               <---------ARR11(3)                --------->ALFIN1     <---------WOX13(1)   --------->ANAC58               --------->ARR11(3)              <---------ANAC58   <---------MYB52(1)  --------->ANAC58 -----CBF    --------->WRKY12              ---------->DOF2--------->YAB1--------->YAB1--------->ANAC46 >ATHB12  <---------MYB46(3) <---------TOE2(3) <---------ANAC58  <-------GAMYB      ---------->DOF2 ---WOX13(1)<---------MYB52(1)     --------->AHL20(2)  --------->WOX13(1) <---------YAB1 ----------->RAV1(1)   gcgatgtattagccgttgatcttaaattgttaatgaaaaaaatactaaagcgtgcgtcaatcttgaccgttgatttataatttgataaaagccacacaaa  17287600                                                                    <---------AHL20(2)                                                                    <---------AHL20(1)              -                                                           <---------ICU4               <---------ALFIN1                                                           --------->YAB1           --------->ZAT2 <-                       --------->ATHB12                    -------->HAHB4           <---------At4g35610                      --------->ICU4                      <---------YAB1      --------->AtLEC2-------                      <---------YAB1                     <---------TOE2(3)    <---------YAB1  <------               <---------ANAC46                        --------->AHL20(2)   <---------ICU4   <-------            --------->O2                               <---------AHL20(2)--------->YAB1<---------ABI4(2)            <---------bZIP60(1)                       --------->AHL20(2)<-------TEIL<---------ZAT2<--            --------->bZIP60(1)               <---------ANAC58      --------->AHL20(1) <---------ZAT14 ---->DOF2  <---------O2                      <---------ANAC58     --------->AHL20(2)  --------->ZAT14 ->ANAC46--------->ANAC46                   <-----------HVH21    --------->TOE2(3)  --------->At4g35610   agtacaactaaacgacgtcgtgtaatgagtgagaaaccccaaacgctgtcgtttcatttaatgataacattatattcatcatgctaagctgcaccgtttt  17287700       <---------DAG2       <----------DOF2 ------>NtERF2 --------->LBD16                                                    --------->LBD16 --------------->AtSPL8                                             ------>NtERF2 <------NtERF2                                                     <---------ETT(1)            ------ -------->DEAR3(1)          --------->DAG2                         --------->ANAC46           ------- --------LBD16       <----------DOF2                         <---------ANAC58                 ------- -->ARR14(2)   --------->DEAR3(1)                            <---------ANAC58                 ------- ---ARR14(2) <---------At5g28300                          <----------DOF2       >>>>>>>>>TBF1 ------- --MYB52(1) <-----------GT1---------->DOF2            <-----------GT1       <------ZmHOX2a(1) ------- -------RAP2.3(1)<---------CCA1(2)             --------->ANAC55(2)<---------LBD16  >>>>>>>>>TBF1 <---   cgccgcgtactttatcaccgtctctttgaaaaagcgcttcgatttcttcaagtgattttcctttcgtctccggcaagaggaagaagaagaaattccacgc  17287800       --------->GLK1(1)     <---------ALFIN1    --------->LBD16    ------>NtERF2                                                 --------->ANAC46   --------->RAP2.3(2)                                    ----------->RAV1(1)   --------->ANAC58                                       ------->GAMYB   --------->ANAC58                                      --------->MYB46(3)           <-------TEIL   --------->ANAC46                                   <---------WRKY45             <---------ANAC58   --------->RAP2.6(2)                        --------->ZAT18     --------->ANAC58 <---------ANAC46 >NtERF2    --------->LBD16                   <---------ZAT18     --------->ANAC58 <---------ANAC58 -->bZIP60(2)                          --------->MYB55(2)--------->ANAC46         <------NtERF2 -->ANAC58  ------>NtERF2              <---------MYB46(3)<----------ID1          ------>NtERF2 -->ANAC58 <---------DEAR3(1)   <---------ALFIN1      <---------WRKY12          <---------DEAR3(1) -->ANAC46<---------LBD16   --------->At4g35610       <---------WRKY38(1)       --------->ALFIN1    < -->O2 <---------GLK1(1) ---------->DOF2<-------GAMYB--------->WRKY18(1)   <---------ALFIN1       <-- ------ALFIN1        ---------->DOF2 <---------MYB52(1)<---------DOF5.7(2)<---------REM1(2)       ---   cactgccgcaactccggcgaacataaagaaagctccaccggtggttatcgcactagtcaacgacaaaaacgacatcgacacggtggcgttcattactctg  17287900  Previous    Next  AGI:  At4g36660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22870.1); contains InterPro domain Protein of unknown function DUF1195 (InterPro:IPR010608) Range:  from: 17285738    to: 17287433    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36670.1    Description:  mannitol transporter, putative. Identical to Probable polyol transporter 6 (PLT6) [Arabidopsis Thaliana] (GB:Q8GXR2;GB:O23213); similar to mannitol transporter, putative [Arabidopsis thaliana] (TAIR:AT2G18480.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68316.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved site; (InterPro:IPR005829); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); contains InterPro domain Sugar transporter; (InterPr Range:  from: 17287503    to: 17289594    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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