Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------WRKY38(1)                                                      ------->GAMYB                                                     --------->MYB46(3)                                                    --------->ZAT14                                                   ----------->RAV1(1)                                                --------->AtMYB61                                   <       ------>NtERF2                            <---------ALFIN1     --------->ARR14(2)             < -------->DOF2                                 --------->ANAC46      <---------ARR14(2)             < -->ZmHOX2a(1)                               --------->ANAC46  --------->ARR14(2)                   - ---->TOE2(3)      --------->GLK1(2)   <---------GLK1(2) <---------ETT(2)                          <- --->YAB1----------->RAV1(1)---------->DOF2 --------->MYB46(3) <---------ARR14(2)            >>>>>>>ZML2   taaaatcgatgccacatcgataatctgcatataagccctaagattatccaccacaacagtcgacgaattcgaattcgatgttgacgaagcgagttctagg  17285200                                                                                                    <                                                                                                   <-                                                                                                  ---                                                                                              <------                       --------->LBD16                                                        -------         <---------ZAT14   ---------->DOF2                              <-----------RAV1(2)   ------- ---------MYB46(3)   <---------LBD16                     <---------ANAC58         --------->DAG2<---- ---------ANAC58  --------->WRKY38(1)                    <---------ANAC58   <--------P     --------->ICU4 ---------ANAC58<---------At4g35610                --------->ARR14(2)<---------PCF5    --------->At5g28300 -------->MYB52(2)----------->HVH21                <---------ARR14(2)<---------PCF2    <------NtERF2< ------TEIL     --------->At4g35610                --------->GLK1(2)----------->HVH21 ----------->GT1   gttcgttcgagttcagcgagatgaccggagaaagagagggaagagcgagcgaaaatcgggcttggctcgagggaccaggtagagaaggcggtaatgaatc  17285300                                             <------NtERF2                                            ------>NtERF2                                            --------->ABI4(1)                                           --------->RAP2.3(2)                                           <---------DEAR3(1)                                           --------->DEAR3(1)                                           --------->RRTF1(2)                                           --------->RAP2.3(3)                                           --------->RRTF1(3)               ======================HOX2a_HOX2a               ------>ZmHOX2a(2)          --------->RAP2.6(1)              =======================HOX2a_HOX2a              <---------HSFB2a(1)         --------->RRTF1(1)              --------->HSFB2a(1)         --------->ATERF1(1)              <------ZmHOX2a(2)           --------->DEAR4(2)              =============HOX2a_HOX2a    --------->RAP2.3(1)             <---------ARR14(2)           --------->ORA47(2)             --------->ARR14(2)           --------->DEAR3(2)     <-------TEIL                         <------NtERF2  <------MYB83--------->HSFC1(2)          --------->ERF1  <------MYB46(1)                        ------>NtERF2  <---------HSFC1(2)                     <---------RRTF1(1)  <---------HSFB2a(1)                    <---------ATERF1(1)  <---------DEAR3(2)                     <---------RAP2.3(1)  --------->HSFC1(2)                    <---------ANAC58 ============================HOX2a_HOX2a  --------->HSFB2a(1)                   <---------ANAC58<---------------------WRI1 --------->MYB59                        <---------RAP2.3(2) --------->MYB111(1)                <-------GAMYB       =============================HOX2a_HOX2a --------->MYB46(2)                <---------MYB46(3)   <------ZmHOX2a(2) --------P   ------->TEIL     ==================================HOX2a_HOX2a         <---------ANAC58 --------MYB52(1)            <---------At4g35610       <---------ARR14(2)           <---------ANAC58 ------>LBD16<---------ARR11(3) ------------>AtMYB77   --------->ARR14(2)           <---------ANAC46 ---ARR14(2) <-----------ARR10=================================HOX2a_HOX2a     <---------ANAC58 -->ARR14(2) --------->ARR11(3)----------->HVH21      <---------GLK1(1)        <---------ANAC58 >TEIL <---------SPL7      <-----------RAV1(2)  <---------MYB52(1)    <---------At4g35610 -----LBD16 <---------ARR14(1)<------ZmHOX2a(1)<---------SPL7         --------->At4g35610 ---------MYB55(1)  ------>ZmHOX2a(1) <---------ATERF1(1)------>ZmHOX2a(2)    <------ZmHOX2a(1)   cggtaggttcgaacggatcttcctcgtcttcaggagacggttgcgccgccgtttggagatcggaagtgactaagcagagaggagtgtcttgggctcggag  17285400                                                                                      <---------AtMYB61                                                                                      ---------------                                                                                      <--------------                  <---------ANAC58                                                 --------->ALFIN1                  <---------ANAC46                                            --------->GLK1(1)                  <---------ANAC58      ----------->HVH21                     <---------At4g35610                  <---------RAP2.6(2) --------->ANAC46--------->ZAT14         --------->ZAT2           <---------MYB46(3)         <---------ANAC55(2)                     <---------ZAT2      ---          <---------AtMYB61           --------->ANAC58<---------ZAT18    <---------LBD16   <---------ALFIN1        <---------MYB46(3)            --------->ANAC55(2)               -------->P<-------PIF5 <-----       --------->ALFIN1               --------->ANAC58--------->ZAT18   --------->MYB52(1)<---------ZAT14       <---------DEAR3(1)<---------ANAC58   --------->ANAC58          ------>ZmHOX2a(2)<---------MYB46(3)       <---------AtMYB61 <---------ANAC58   --------->ANAC58  <---------MYB52(1)  ------->PIF5-------    --------->ALFIN1  <-----------RAV1(1) ------>NtERF2      <-------GAMYB --------->LBD16--------->SPL7   atggaagaggtggtggttttgcgtctgtcgttcttccattacgcgaccgcaagatgagcactccgttattgatctaccggagctcgtggtggtacaccgt  17285500                                                                                    ----------->GT1                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                           --------->ALFIN1                                                                          <-------MYC2                                                                          <-------PIF4                                                                          ------->MYC3                                                                          ------->PIF4                                                                          <-------MYC3                                                                          --------->TOE1(2)                                                                          <-------PIF5                                                                          ------->PIF5                                                                          <-------MYC4                                                                          ------->MYC2                                                                          ------->MYC4                                                                         --------->O2                                                                         <---------ANAC58                                                                         <---------O2  ---------->DOF2                                                                         <---------ANAC55(2)                                                                         <---------TGA1a                --------->SPL7                                           --------->ANAC55(2)      --------->At4g35610                                                --------->TGA1a     --------->DEAR3(1)                                                  =========================bZIP_DOF    <------NtERF2                                                        =========================bZIP_DOF   ------>NtERF2--------->SPL1(2)                                        <---------ANAC58 >AtSPL3        --------->ZAT14                    <------------------------ANAC81<---------ZAT14 -AtSPL8      <---------SPL7                <---------ANAC58            ------------>OsbHLH66 -------->RAV1(2)    <---------ALFIN1       <---------ANAC58     <-----------GT1  --------->ZAT18 ------HVH21<---------------AtSPL3      ===========================================bZIP_DOF <-------- -->DEAR3(1)--------->ZAT6              <----------DOF2        <-----------GT1   --------->ALFIN1  --   ccctgcgccgatgaacagtacggacacttcatttttgtgtttctttacgtttgtgtttttttttttttcactctcacgtgcgagtgtggtaaagcttttt  17285600                                                     <------MYB46(1)                                                     <------MYB83                                              <---------------AGL15                                              --------------->AGL15                                             <-----------------AG                                             <-----------------AGL3                                             <-----------------AGL2                                --------->ZAT14     --------->MYB59                        --------->ARR14(2)   --------->TOE2(3)                        <---------ARR14(2)   --------->YAB1             --------->DAG2    *TSS               <---------CCA1(2)   <---------ARR11(3)<---------ZAT14       --------->YAB1 --DOF2             --------->LBD16     --------->MYB46(3)   --------->ZAT14  ------------>CBF <----- ------->ZAT6   --------->MYB52(1)   <---------WRKY38(1)    <<<<<<<<<<<<<<<<<LFY  <---------ATHB12   tatactacaagagtaaacaaaccgcgtattttagtttagtcaacaaatcttaatttggtaatctacagtggcaaaaggttgccaataacaacacagattc  17285700                                                            <---------ANAC46                                  --------->ARR11(3)        <---------ANAC58                                  <---------ARR11(3)   <---------------AGL15                                  --------->AHL20(1)   <----------DOF2                                  <---------AHL20(1)   <---------DAG2                           >>>>>>>>>TBF1        ------>ZmHOX2a(2)                  --------->GLK1(1)             <-------TEIL<---------ANAC58                  --------->CCA1(2)            <------ZmHOX2a(2)          <---------TOE2(3)                  <---------GLK1(1)           --------->ARR14(2)          <---------TOE1(3)         -                 --------->ARR11(3)   --------->YAB1  <---------ANAC58    --------->DAG2        <----      <---------TOE1(2)--------->At4g35610    <---------ARR14(2) ---------->DOF2      <---------ANAC58 --TEIL          <---------ARR11(3)  <---------YAB1   <---------ANAC58--------->YAB1  <---------ANAC58   aagagtcccaagttttgaagatatcagaagaagaaatatatcataagggatccattgctttttcgtgtaaagtcataaggttccatttgcttctacatat  17285800                           ------>MYB46(1)                           ------>MYB83                          --------->MYB52(1)                         --------->TOE1(2)                         --------->TOE2(2)                      <-----------GT1    ---------->DOF2<---------ICU4  <---------YAB1  --------->AHL20(2)                                                               <- -------->YAB1    <---------AHL20(2)     ---------->DOF2                                           <- -----AHL20(2)    <---------YAB1    ----------->GT1                                             <----   atttataaaagtagctctatataattaccaacgatagaatgtaaaaagagcaatttgatttcgaaaattgaattttagtcccaaaatgaaatctatccat  17285900                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC46                                                         <---------At4g35610                                                    <---------ICU4    ------>NtERF2                                                   <---------YAB1  <---------At4g35610          <----------DOF2                          --------->ICU4  --------->At4g35610  <---------MYB46(3)                             --------->YAB1 <---------At4g35610 <--------P                                     <---------YAB1  --------->At4g35610 -----MYB83                                    <---------ARR11(3)  --------->ZAT2                <--- -----MYB46(1)  <---------ANAC58               --------->ARR11(3)  <---------ZAT2 <---------GLK1(1) -----MYB52(1)  <---------ANAC58        <-----------GT1  --------->At4g35610<---------ANAC46     <---   ttggtagttcatcttttggcttcagcaagtagtagacatatgttaccaatatcattatcagctactagctgctggcttgtgtagaattctcttcaagttt  17286000            <---------ZAT18             ----------->GT1      <---------TOE2(3)            --------->ZAT14           ---------->DOF2        <---------TOE2(2)     <---------ARR14(2)          ---------->DOF2        --------->ZAT6                           ----     --------->ARR14(2)   --------->MYB52(1)          <-----------GT1                          <----- ------ANAC58           --------->MYB46(3)       ----------->GT1                               ------ ------ANAC58   XXXXXXXXXXXXXXXXXXXXX>MIR845B---------->DOF2<-----------RAV1(2)  --------->AHL20(2)   cttcccaaatcccttgcactctgagaacaaaccgataaagaaaagaaaaaagagtttaacactcaggttaagtctatgaacaatttaagagaagaaatta  17286100  Previous    Next  AGI:  At4g36650.1    Description:  transcription factor IIB (TFIIB) family protein. similar to TFIIB (TRANSCRIPTION FACTOR II B), RNA polymerase II transcription factor [Arabidopsis thaliana] (TAIR:AT2G41630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22869.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Transcription factor TFIIB related; (InterPro:IPR000812); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Transcription factor TFIIB, cyclin-related; (InterPro:IPR013150); contains InterPro domain Cyclin-like (InterPro:IPR011028) Range:  from: 17283139    to: 17285604    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22870.1); contains InterPro domain Protein of unknown function DUF1195 (InterPro:IPR010608) Range:  from: 17285738    to: 17287433    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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