Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ---------->DOF2                                                   <---------AHL20(2)                     --------->ATHB12                                                  --------->AHL20(2)                      -------->HAHB4                                           ---------->DOF2                     <---------RAP2.6(2)                                        <---------HSFB2a(2)          <------ZmHOX2a(1)   <---------ATHB12          <---------CCA1(2)             <---------HSFC1(1)          <----------ID1   --------->AHL20(2) ------YAB1------->TEIL                 --------->HSFB2a(2)      ---------->DOF2   <----------DOF2 -GT1 <----------DOF2                   --------->HSFC1(1)  ----------->GT1   --------->RAP2.6(3)  <-   taatccaactttgaatcttcttaacatctgataaactctcttctagaaagcattaaatcgacttgtcaaaaggacataaatacggctttaaatgattcaa  17278800                            --------->ANAC58                           --------->ZAT18             <xxxxxxxxxxxxxxxxsmallRNA(i)                <---------DAG2            <---------AHL20(2)             <-----------GT1--------->ANAC58  --------->YAB1                  --------->ANAC46<------        <---------YAB1---------->DOF2   --------->GLK1(2)       --------->GLK1(2)          <--------- --------GLK1(2)<----------DOF2 --------->MYB52(1) <----------ID1  ----------->HVH21--------->YAB1<--   agaatttcttatatttgactttttaaaagcacacaaacagagaatttatcaaaaaaacaaaacaagactctgacatctctcagccatcaaaattttcttt  17278900                                   <---------ICU4                                   --------->YAB1                                  <---------YAB1                 <---------ATHB12                      <-----------GT1<---------YAB1     <---------ICU4 ----DOF2         <----------DOF2--------->ARR11(3)--------->TOE1(3)         ----------->GT1 --GT1            <---------DAG2--------->YAB1     --------->TOE2(3)       <---------ANAC46   <------ --------DOF2  ------->TEIL    <---------YAB1      <---------MYB59--------->YAB1              -------   cttttttggtcaccatgaaacttttttctaaatatgatcatgaaacattgaaacctaaacatttctaatcaagagagacttgtaaaaacagaaggaagct  17279000                                                                                     <------ZmHOX2a(2)                                                                                    ------->TEIL                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    <-----------ARR10                                                                                    --------->ARR11(3)                                                                                   <---------CCA1(2)                                                                                 --------->ANAC55(2)                                                                                 <---------ANAC55(2)                                                           --------->GLK1(2)     --------->ANAC55(1)                                                          <---------GLK1(1)  -------->HAHB4                                                          <---------GLK1(2)  --------->YAB1                                                 --------->TOE2(3)        ------>MYB46(1)                                                <---------ANAC55(2)       ------>MYB83------>ZmHOX2a(2)                                                --------->ANAC58        <---------MYB59<----------DOF2    --------->ANAC58          --------->MYB52(1)--------->ANAC58       --------->ANAC55(2)         <-    --------->ANAC58--------->GLK1(2)           ----------->GT1   <---------ICU4<---------LBD16<----- ---At4g35610   --------->HSFB2a(2)       <---------------------WRI1   <---------ANAC55(2) <--------- -->At4g35610 <------ZmHOX2a(2)      --------->YAB1 ---------->DOF2  <-----------GT1<---------ARR11(3)   aaatcgaagcaaaacgatcgagaatcaaacacaaacgaatcaaaatcgaaacgtaaaagggaatctcattcttacctaataatacggatctttctttctt  17279100                                                                    ================================bZIP_DOF                                                                    --------->ANAC58                                                                    ================================bZIP_DOF                                                                    --------->ANAC46                                                                    <---------ANAC55(2)                                                                    --------->ANAC55(2)                                                                    --------->ANAC58                                                                    <---------TGA1a                                                                    --------->O2                                                                    <---------O2                                                                    --------->TGA1a                                                                 <---------REM1(2)                                                                <-----------HVH21   <----------DOF2                                          <------MYB46(1) ---------DOF2                                              <------MYB83                 ---------->DOF2 -----DOF2                                                 --------->MYB59         <---------ALFIN1 -DOF2 <----------DOF2                                     <---------AtMYB61<---------YAB1   tctttctttctttcagtagattaaactgatcacagagagagagagagaggctcgatggagtttggtcgtcacgcgagtatcattcccacttcaaagggac  17279200                                                                         --------->ZAT2                                              <---------ANAC58        ---------->DOF2                                              <---------ANAC46     --------->TOE2(3)       <---------                                         <-----------RAV1(1)       --------->TOE1(3)     <---------YAB1      *TSS  <---------ANAC55(2)  ------------>CBF             --------->YAB1     <---------MYB52(1)     <----------ID1            <-----------GT1<---------ANAC58--------->AHL20(2) <----------DOF2 ----  --------->DAG2             <---------AHL20(2) ----------->GT1    <----------DOF2     <---------MYB46(3) ---------->DOF2          ------->TEIL<---------AHL20(2) ------------>CBF<---------At4g35610   <-----   ttaaaaagcgagaaacgtgaagaaaatgtattttaaccaatttatgtggcatgtaaaatttcaataaaactttaaagctggccctttgtttgttattgtg  17279300                                                                                    =================                                                                                   ==================                                                                                   <------ZmHOX2a(2)                                                                                   --------->CCA1(2)                                                                                  <---------AGP1                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                <-----------GT1                <-------GAMYB      --------->AGP1      <------------CBF<---------ICU4                          <---------ANAC46    --------->ARR11(3)    <------NtERF2     <---------AHL20(2)       <---------AHL20(2)       ------>MYB46(1)        <-----   <<<<<<<<<<<<<<<<<LFY --------->ICU4--------->YAB1          <---------ANAC58    <---------ARR11(3)  --------->PCF2     --------->AHL20(2)       --------->AHL20(2)        ------>MYB83------>ZmHOX2a(2) ---CBF            --------->YAB1  <----------DOF2 <-----------GT1    <---------MYB59     --------->ICU4 ------>DOF2     --------->AHL20(2)--------->TOE2(3)     --------->ARR14(2)      <---------CCA1(2) ----YAB1<---------MYB46(3)<---------YAB1   --------->TOE2(3) <---------ANAC58  ----------->ARR10 <--   aaaggccccattggttgaaaataataaatatgatttactttaataacattaattttcagtattggcgttggaccaaataactcagatctgaaatgatttt  17279400                       <------MYB83                   <---------ARR14(2)                   --------->ARR14(2)               ------>ZmHOX2a(2)               <-----------------AGL2              <------ZmHOX2a(2)              --------->ARR14(1)              --------->CCA1(2)             <---------ARR11(3)             <---------ARR14(2)             --------->AGP1           ----------->ARR10       <------ZmHOX2a(1)       ==============HOX2a_HOX2a       ===============HOX2a_HOX2a          <------MYB83                          <---------MYB46(2)      <----------ID1   <------MYB46(1)    --------->MYB59                        <------------MYB.PH3(2) =============HOX2a_HOX2a          <-----------------AGL1                        <---------MYB52(2) =============HOX2a_HOX2a   ----------->GT1<------MYB46(1)                       <---------MYB59 ----AHL20(2)--------->ARR11(3)   --------->YAB1                     <----------DOF2     <---------CCA1(2) -------YAB1 --------->ARR14(2)   <-----------GT1             <-----------GT1  <-----------GT1   <---   atgacaagaggacaagatccgaatttggtgaagtaataacaaatttggtcattttccaaaattctaaccttctttcacgtttaactaactcttatctgtc  17279500                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                                   --------->ATHB12                        <---------ICU4                                   --------->YAB1                         <---------ATHB51                                  --------->ICU4                          --------->AHL20(2)                         ----------->GT1                         --------->At4g35610             --------->ANAC58     <---------YAB1       --------->ZAT14    <---------AHL20(2)             <---------YAB1     --------->YAB1         <---------ZAT18    --------->ICU4 <-----------GT1         <-----------HVH21      <---------ICU4         <---------ZAT14   --------->AHL20(2)         - -------DOF2 --------->ANAC58  --------->ICU4          --------->ZAT18   <---------AHL20(1)<---------   tttgtttattgtgtcacgatagagaacaggtaaattatgattagaaaacttattgagttcactaattagcttcaaaataattaaaaaaatgtaacagttt  17279600                                         --------->YAB1                   ------->TEIL --------->MYB46(3)           <---------ICU4     --------->ANAC58                                ---------->DOF2           --------->YAB1     --------->ANAC46             ------------------------>ANAC81 <------ZmHOX2a(1)          <-------TEIL        --------->ANAC58    <---------TOE2(3)  <----------ID1<-------TEIL -------->YAB1  <---------ANAC55(2)   <----------DOF2     <----------ID1  >>>>>>>>>TBF1 --------->DAG2 ---MYB.PH3(1)  --------->ANAC55(2) <---------DAG2--------->MYB59  --------->MYB52(1)  ---------->DOF2   tttcatactatattcattatgtatttatgtgcaaaccactctttcatggttttaggtagaagaacaaaaaaacgaagaagaaaagtccataaaggacagc  17279700  Previous    Next  AGI:  At4g36640.1    Description:  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G75170.2); similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G75170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22852.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071); contains InterPro Range:  from: 17276941    to: 17279206    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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