Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ======================bZIP_DOF         <---------TGA1a         --------->O2         --------->ANAC58         --------->ANAC58         --------->TGA1a        ------->TEIL  <---------MYB46(3)  <---------DEAR3(1) -------GAMYB                                   --------->ANAC46 --------MYB46(3)                        --------->ANAC55(2)      --------->AHL20(2)    <---------YAB1 -------ANAC58                           --------->ANAC55(1)      <---------AHL20(2)  --------->YAB1 -------ANAC58                           --------->ANAC46      ------>MYB83          <---------YAB1 -------DREB2C(2)                <---------ARR14(2)  --------->MYB46(3)              --------->ICU4 ------RAV1(1)         <---------ANAC58  --------->ANAC58      ------>MYB46(1)  ----------->GT1 >GLK1(2)--------->ANAC46        --------->ARR14(2)--------->MYB52(1)    --------->YAB1<-----------GT1 -ARR14(2)             <---------ANAC58  --------->ANAC58    <---------MYB59   --------->DAG2 >ARR14(2)          <----------DOF2    <---------ALFIN1  ----------->HVH21    ---------->DOF2   gcggtcgatgcacgtctctcttctttcttgaatcggattccacacgcattacacaacgactgaccaaattaaaaatcatataaagttattatcaatattt  17269300                                              --------->AHL20(1)                                              <---------AHL20(1)                                        ----------->GT1                                        --------->YAB1                                       ----------->GT1                                       --------->ICU4                  <---------AHL20(2)                                  --------->ANAC58          ----------->GT1                           ----------->RAV1(1)<---------AHL20(2) --------->ANAC55(2)                           <---------ALFIN1--------->AHL20(2)    <---------ANAC55(2)             ----------->GT1      --------->ANAC58         <---------TOE2(3)                        -       --------->ZAT14     --------------->AGL15           <---------TOE1(3)      <---------PCF5    <       <---------ZAT14     ==========================================================================   <---------------AtSPL8  <---------------AGL15         ---------->DOF2   --------->ARR11(3)    ---- <-----------RAV1(1)      ----------------->AGL2     <---------TOE2(3)--------->AHL20(2)        <----   gttttgttgtacagagagaaatattagtcccacatcaagaaatgataaaatatttgatgtaaaggttacatattaaataccttgggacctcttggaccgt  17269400                                                                         ------>NtERF2                                                                        ------->GAMYB                                                                        <---------ALFIN1                                                                        --------->DREB2C(2)                                                                        --------->DEAR3(1)                                                                       --------->MYB46(3)                                                                       --------->ORA47(2)                                                                     <---------ALFIN1                                                                     --------->AtMYB61                                                                    --------->MYB46(3)                                                                   <---------ATERF1(1)                                                                   ------>NtERF2                                                                 <------NtERF2                                                                 --------->ATERF1(1)                                                                 --------->RAP2.3(1)                                                                ------>NtERF2  <---------ANAC46                                                                <---------ATERF1(1)                                                                --------->ABI4(1)                                                               --------->RAP2.3(2)                                                               --------->DREB2C(2)                                                               --------->RAP2.3(3)                                                               --------->RRTF1(3)                                                               <---------ALFIN1<---------ANAC58                                                               --------->RRTF1(2)                                                               --------->RAP2.6(2)                                                               --------->ATERF1(2)                                   ----------->HVH21           <---------ATERF1(2)                                 --------->ANAC46              --------->DEAR3(1)                                <------NtERF2                 --------->ORA47(2)                              <---------DEAR3(1)              --------->ATERF1(1)                            <---------ZAT2                    --------->RAP2.6(1)                            <-------GAMYB                     --------->RAP2.3(1)                            --------->ZAT2                    --------->DEAR4(2)                        <---------ANAC46                      --------->ERF1   <---------ANAC58                       <------NtERF2--------->MYB52(1)        --------->RRTF1(1)                     <---------bZIP60(1)                     <---------At4g35610         <------ZmHOX2a(1)  --------->At4g35610              <---------ATERF1(1)   ---------->DOF2   --------->bZIP60(1)                     --------->At4g35610 -------------->AGL15--------->ALFIN1                        ------>NtERF2 <----------DOF2 ---------------AGL15<---------REM1(1) ------->GAMYB         <------NtERF2 <---------DAG2 ===============MADS_MADS   <---------At4g35610             --------->ANAC46<----------DOF2 ----->ARR14(2)      <-----------RAV1(1)               --------->MYB59<---------ATERF1(1)   <-------- -----MYB52(1)    --------->ALFIN1 <------NtERF2 <------ZmHOX2a(1)--------->DEAR3(1)--------->ARR14(2)   ttctccaaagaggagtagaagtggtgtcgcagttggcgcaacggcgagcgaggaggttatgtccgccgcctccaccgcctttcttggaaccgttcaagaa  17269500                                                                                                   ==                                                                                                   --                    --------->CCA1(2)    --------->YAB1                  <---------GLK1(1)       ----                 <---------TOE1(2)      <-------TEIL                     --------->GLK1(1)      -----                 <---------TOE2(2)--------->TOE2(2)                 <---------ANAC46           <-----                <------NtERF2   <---------ARR14(2)               --------->ALFIN1              <-----              <---------ANAC46  <-----------ARR10            <---------ANAC58             <---------ZAT14              --------->ETT(1)  --------->ARR14(2)           <---------ANAC58             --------->ZAT18             <------NtERF2      --------->GLK1(2)            <---------ANAC46             --------->ZAT14 -HSFB2a(2) <-----------HVH21  <---------GLK1(2) ------>ZmHOX2a(1)<---------ZAT14         <---------ZAT18   gtcccagcctatggtgtcggaggtatgagacgagaatctacgttcatcatcctcgttgcagaggcgagtggagggagttccaagtgagagagtgcagtca  17269600                            --------->O2                            --------->bZIP60(1)                            <---------bZIP60(1)                            <---------O2                            <---------bZIP60(2)                            <---------TGA1a                            --------->TGA2(1)                            <---------TGA2(1)                            --------->TGA1a                           ----------->STF1                          <---------TGA2(2)                         ----------->TGA1                         ----------->HVH21       <-------MYC3    --------->At4g35610       ------->MYC3    <---------At4g35610 =====================================MYC_MYB ----->GAMYB       --------->ATHB12    --------->LBD16 ----->At4g35610   --------->YAB1     <---------LBD16 ------>RAV1(1)    <---------ICU4    <---------LBD16            <---------ATHB12    --------->GLK1(1) ----WRKY12       --------->ICU4     <---------ANAC46         --------->ANAC46      <---------GLK1(1) ----WRKY38(1) <------ZmHOX2a(1)    <---------LBD16       --------->GLK1(1)  ------->TEIL   ---------   acagaagcatatggagaggaatgatggctgacgtcgttttcgggggagaagaacattgagaaacccatcactatatatgaacttggaaaccctagaaagt  17269700                                                 *TSS                                                <---------ANAC46                                               <---------AtMYB61                                               --------->ALFIN1                     --------->At5g28300                                              <---------ZAT14                      ----------->GT1                                             --------->ALFIN1                   --------->MYB52(1)                                           <---------ANAC58                    <---------ARR14(2)         --------->AHL20(1)                <---------ANAC46                 <---------TOE1(3)         --------->ARR11(3)                <---------ANAC58                 <---------TOE2(3)         <---------AHL20(1)            <---------ZAT14                  <---------HSFB2a(2)        <-    <---------AHL20(2)   ---------->DOF2 <---------ANAC46            <---------ARR11(3)            --    --------->AHL20(2)<------ZmHOX2a(1)<-------GAMYB       --------->At4g35610<------ZmHOX2a(1)<----- ->DOF2 --------->AHL20(2)        --------->ALFIN1<---------ANAC46   --------->ARR11(3)---------->DOF2   tgatattaaaatatatagagagaaggagaaagagaagtgtgtgttgtgtgtggtgtttatgagatgaataagttctctaaggaaacggtgaaagaagagt  17269800                              ----------->GT1                              <---------ANAC46                            <-------GAMYB                      <-------MYC3                     <---------O2                                                               <----                     --------->ANAC46                                                       <------MYB83                     --------->O2                                                           <------MYB46(1)           ---------->DOF2 <-----------RAV1(1)                                             --------->MYB59       ---------->DOF2------->MYC3                            --------->ARR14(2)    <------ZmHOX2a(1) --------At4g35610<---------ZAT18                             <---------ARR14(2)   ----------->GT1--- ------->At4g35610<---------WRKY38(1)                         --------->GLK1(2)   ----------->GT1---- ------HVH21      --------->ZAT18       <----------ID1<---------AHL20(2)      ---------->DOF2 -------   cagccaaaacaaagaaagagtccacgttgctgttgtgaaatggagacaagaagtatttatagagaatttgggaacttggcaaaagaggaaaatttggtcc  17269900                                                                                         <---------ARR11(3)        <---------ANAC46                                                             ---------->DOF2        <---------ANAC55(1)                                                        <---------REM1(2) -----LBD16        <---------YAB1                                       <---------MYB52(1)<---------REM1(1) ------>LBD16    --------->ATHB12         ---------->ID1      --------->ARR14(2) --------->ETT(2) --- ----->LBD16    <---------YAB1       <----------DOF2 <-----------GT1   <----------DOF2   --------->ARR11(3) -->PCF5<---------YAB1        <----------DOF2<----------DOF2  <---------ARR14(2) <---------ETT(2) <--   cggtcttattatgtgtgtatgattaatctatgctttattcttttgttctttagatttacatgtgaatttgctcctttagtttgtctacaaagatgttgca  17270000                                                                                                 ----                                                                                          <---------ZAT14                                                                                    -------->HAHB4                                                                            --------->AHL20(1)   <---                                                                            <---------AHL20(2)   <---                                                                            --------->AHL20(2)   ----                   <------MYB83                                            --------->AHL20(2)   <----   --------->KAN4(2)                                                 >>>>>>>>>MYB98 --------->YAB1  --------->KAN4(1)<---------MYB46(3)             --------->YAB1    ------>MYB83<---------AHL20(2)  <---------KAN4(1)<------MYB46(1)                <-----------GT1   ------>MYB46(1)<---------YAB1---- ------->TEIL     <---------AtMYB61            --------->YAB1       --------->MYB52(1)    <---------At4g35610 ------>ICU4   <-----------RAV1(1)            <---------AHL20(2)  <---------MYB59 <---------TOE2(3) -------ATHB12 --------->ALFIN1              --------->AHL20(2)<-----------GT1  --------->AHL20(2)   atgaatattctaaatatgtgttggtttttgttcagttctaagcgatttttaataacaaaacgttttaacctaacaaaattaattaatgatactgctccga  17270100       <---------YAB1   <---------GLK1(2) ----->GLK1(2)              <---------ANAC46 ------ARR14(2)             ----------->GT1 ------ARR11(1)        <---------ANAC58   --------->MYB46(3)                              --------->ZAT14 ----->ARR14(2)        <---------ANAC58   --------->ANAC46                        --------->ANAC58 -----ARR14(1)    --------->ATHB12<---------AHL20(2)                              --------->ANAC58 --->TEIL        <-------TEIL    --------->YAB1                         <-----------GT1   <---------ZAT14   atctagattattatgcaaattcattgcataccgtataatattccacgaccaagtaccaagtgagtagtcttgtttaacaatgctaagcaaactacagtgt  17270200  Previous    Next  AGI:  At4g36620.1    Description:  zinc finger (GATA type) family protein. Identical to Putative GATA transcription factor 21 [Arabidopsis Thaliana] (GB:Q6QPM2;GB:O23219); similar to MNP (MONOPOLE), transcription factor [Arabidopsis thaliana] (TAIR:AT3G50870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72981.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22839.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 17268912    to: 17269749    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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