Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR11(3)                            <---------AtLEC2                               --------->ARR11(3)                 <-------TEIL ------->ANAC58                --------->AGP1                     --------->ZAT18 ------->ANAC58                <---------AGP1           --------->MYB52(1)  <-------TEIL ------>YAB1            --------->ICU4          ---------->DOF2<------MYB46(1) --->YAB1               <---------YAB1       --------->TOE2(3) <------MYB83--------->AtLEC2       --- ---YAB1             <---------ZAT6          --------->TOE1(3)<---------AtMYB61                ------   taagcatccgatactacggtctagtgatgactagatctatacaagagccttaaagaggtaagggaaggtccacaaacatgcatgggttactgacttagtc  17254300        ----------->GT1       --------->ANAC58       --------->ANAC58       --------->ANAC46      --------->SPL1(2)      <---------LBD16      --------->SPL7     --------->SPL1(1)          ---------->DOF2                                     <---------GLK1(2)    <---------SPL7       --------->AHL20(2)                                      --------->ANAC58    <---------ZAT14      <---------ICU4                                          --------->ANAC58    --------->ZAT14      <---------AHL20(2)           <---------ARR11(3)       <---------WRKY12 -----  <---------------AtSPL3--------->ICU4 --------->MYB52(1)                     --------->WRKY18(1)<--- ------>DOF5.7(2)       <---------ATHB12              --------->ARR11(3)     <-----------HVH21 <----- ---->ID1             --------->WOX13(1)  <---------LBD16            <------------CBF          <-----   gtttactgtacggaaatatagtagcaattaatacaaaagaaaaacggggaagaaaacatcttatatttctctattgcaaggtcaaggaatctcaagtttc  17254400                                             <--------P                      ------->TEIL          <-------GAMYB                                           -                 <---------ANAC58          <---------MYB46(3)                                 <------                 <---------ANAC46   <----------DOF2                                           <------  <------------CBF--------------->AtSPL8<-----------RAV1(1)                                ------->GAMYB ---->ATHB12     <---------ANAC58   <---------DAG2                                       <---------ZAT2 ---------CBF<------------CBF <XXXXXXXXXXXXXXXXXXXXMIR1887                    <---------ARR11(3)   -- ----YAB1 ------------>CBF  --------->HSFB2a(2)               <-----------GT1 --------->ARR11(3) <--- --TEIL  <-----------GT1    <---------HSFB2a(2)    ---------->DOF2     ---------->DOF2   --------->ZAT2   attggattgtttcacaattgtgtgtaccttctctaagactttatgtggttgctaaaagaaatagtcactctcttaaagtatatattcttccaactggctt  17254500    --------->ANAC58    <---------ALFIN1    --------->ANAC58                                                <---------DAG2    --------->ANAC46              <---------HSFC1(2)                <----------DOF2  <---------ALFIN1                <---------HSFB2a(1)     ------>MYB83 ------>GAMYB                     --------->HSFB2a(1)     ------>MYB46(1)               <-------TEIL ---ANAC58            ------>ZmHOX2a(1)           --------->At4g35610                  --------->CCA1(2) ---ANAC58  <---------DAG2        --------->HSFC1(2) --------->MYB52(1)       --------->ANAC58 ------->ANAC46    ------>ZmHOX2a(1)      ------>ZmHOX2a(1) <---------ATHB12  --------->ANAC58  <---- --------GT1<----------DOF2     <------ZmHOX2a(1) <---------At4g35610     <-----------GT1 --------->ARR11(3)   aaccccacaccatgctttttcctcctacttataaggagcttctccttctcttagctaaccaaatcaactccttttttatcaagtcatagatacatcttcc  17254600                                                                                                    -                                                                                                    -                              ------>ZmHOX2a(2)                                                     <                             <------ZmHOX2a(2)                                                      -                            <---------AGP1                                                          =                            --------->AGP1                                                          -                            --------->ARR14(2)                                                      <                            <---------ARR14(3)                                                      =                            --------->ARR14(3)                                                      -                            --------->ARR11(3)                                                      -                            <---------ARR11(3)                                                      <                     ---------->DOF2                                                                -          <-----------GT1   <---------ARR14(2)                                              <--------        <-----------GT1    <---------ARR14(1)                    <---------ANAC58         <----------DOF2     <---------AHL20(2)   ----------->ARR10              <---------AHL20(2)     --------->At4g35610 - --------------------ANAC81<---------CCA1(2)  <-------TEIL       <---------ANAC58         ===========   ttcttatttttttctccctcccaagaagcagatcttgtactctcgatatacatacttattttatatggcttccaactcaatgagctctagcgcttcttgg  17254700                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   ==                                                                                                   --                                                                                               ------                               --------->WRKY38(1)                                             <-----      <------ZmHOX2a(1)       --------->ATERF1(1)                                          --------->At5g28300 -------->O2                  <---------MYB52(1)                                           <------NtERF2 -------->ANAC58--------->AHL20(2)                                                        ------>NtERF2 ---------O2    --------->ATHB12                                                          --------->RAP2.6(2) -------->TGA1a<---------AHL20(1)                                                        <---------ANAC46 ================================bZIP_DOF                                                <---------DEAR3(1) -------->bZIP60(2)          <-------GAMYB                    <---------MYB52(1)         --------->ATERF1(2) ---------TGA1a<---------AHL20(2)                            <-------GAMYB               <---------RAP2.6(2) ====================================MYC_MYB            ------>ZmHOX2a(1)                <---------ATERF1(2) -------->ANAC58<---------AHL20(2)                      ----------->HVH21               --------->RAP2.6(3) -------->ANAC46--------->ATHB51<---------MYB46(3)    ----------->RAV1(2)               <------NtERF2 ---------ANAC55(2)         <---------ANAC58     <---------ZAT18                      --------->WRKY12 -------->ANAC55(1)         <---------ANAC58     --------->ZAT14                      <---------DEAR3(1) -ANAC46       --------->AHL20(2)               <------ZmHOX2a(1)                    <---------MYB52(1) -------->ANAC55(2)         <---------DEAR3(1) --------->ANAC46      --------->MYB52(1)<---------ATERF1(1) =========bZIP_DOF    ---------->DOF2    ----------->HVH21  <---------MYB46(3)     <---------MYB46(3)   acacgtaaggagaacaaattatttgaaagggcgttggctacatatgaccaggacactcctgaccgttggcataacgttgcaagagccgttggcggcaaat  17254800           --------->DAG2          ---------->DOF2 ------->At4g35610                                                      <---------ALFIN1 --------ZAT2                   <---------ICU4 ----------->HVH21        --------->ANAC46 --------At4g35610           <-----------------AGL1              --------->DOF5.7(2) ------->ZAT2   <------NtERF2<-----------------AG               <-------GAMYB                       - ==========================RAV ------>ZmHOX2a(1)--------->YAB1 <---------ANAC58              -------- --------->RAV1(2)       ------->TEIL        --------->WOX13(1)<---------ANAC58   <---------At5g28300 --->ARR14(2)  ------>NtERF2 ======================================================================== ----ARR14(2)  ----------->RAV1(1)   <---------TOE2(3)  <-----------HVH21        <-----------GT1  ---   cagctgaagaagtaaggcgacactacgagcctcctcattagggatgtcaatgacattgagtcagggcgttatccacatcccaattaccgttcaaatggaa  17254900                                    --------->YAB1                             --------->DAG2       ---------->DOF2     ---------->DOF2 <---------MYB55(2)    <---------------AGL15                                          --------->AtLEC2 --------->MYB46(3)    --------------->AGL15                                 <---------AHL20(2) ------->P           <---------GLK1(1)                                     --------->YAB1 --->GT1       ---------->DOF2----------->GT1                          --------->YAB1 --------->ANAC58 ======================================MADS_MADS                      <-------TEIL    --------->ANAC58 ------>MYB46(3)     --------->GLK1(1) <---------GLK1(2)       ---------->DOF2--------->YAB1      <--   acaaccactgaaagcattaaaggaactccaaaaggtaaacagaatatcacaacaattatccataagaaagcattcataaataatagacatgcactctcca  17255000          <---------ARR14(2)                            --------->YAB1          --------->ARR14(2)                           <---------YAB1              <---------ARR11(3)       --------->ANAC55(2)                         <----------DOF2                 <---------ARR11(1)       <---------ANAC46                            <---------DAG2          <---------MYB52(1)       <---------ANAC58                     --------->ARR11(3)        --------->AtMYB61       <---------ANAC58    --------->ANAC46 <---------ARR11(3)        <---------ALFIN1 <---------ANAC58          --------->ANAC58 --------->GLK1(2)         --------->DEAR3(1)      <------ <---------ANAC58          --------->ANAC58--------->RVE1(1)       --------->ANAC46--------->ARR14(2) -------GLK1(2)       <-----------GT1    --------->AHL20(2)  ----------->GT1      <---------CCA1(2)   gtttcttatgcgtgtcttcttgtttcaccaggccagagaaaaaaaaaatctagctttatgatatagtaaacaccaccgtttcccatatctatgaactgtc  17255100                        --------->WOX13(1)                     --------->ANAC58                     --------->ANAC58                   ---------->DOF2               ------>NtERF2              --------->TCP20              --------->TCP15(1)                                             <---------ICU4         <              <---------PCF5                                                 <--------HAHB4         -              <---------PCF2                                                 --------->ATHB12     ---             <---------TCP23                                   --------->ARR11(3)                 <--         <-----------RAV1(1)                 ---------->DOF2   <---------ARR11(3)      <---------MYB52(1) -----HVH21--------->ALFIN1     --------->MYB52(1) --------->MYB52(2)       <---------YAB1--------->At4g35610   ccaacttctaactgtggggccaaaagcaatctagtaacagagaattcaaaagttagttttgtcaagttcttgaaattgatcattagcccattagctctat  17255200  Previous    Next  AGI:  At4g36570.1    Description:  myb family transcription factor. similar to MEE3 (maternal effect embryo arrest 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G21650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47617.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057) Range:  from: 17254665    to: 17255053    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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