Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->AtLEC2                              <---------ARR11(3)            <------ZmHOX2a(2)    <------ZmHOX2a(1)            <---------AHL20(1)                -----        <---------------------WRI1                            --------->AHL20(1)              <------      ------->GAMYB        --------->YAB1               --------->ANAC58               <------NtERF2     --------->MYB46(3) --------->YAB1  --------->ZAT18 --------->ANAC58          --------->ANAC46   <-----------GT1--------->YAB1<----------ID1        ---------->DOF2             --------->ANAC58 -------DOF2============================HOX2a_HOX2a  --------->YAB1               --------->ANAC58<--   ttttgtaaccatcgatccattcaaaataatcagaaggacaagggcaataagacaatgaaagcaatatatcatcgctaaaaatccaaggcatcgttgaatg  17201500                  <---------AHL20(2)                  --------->AHL20(1)          <---------LBD16       ---------->DOF2           <-----------GT1   ------>ZmHOX2a(2)     --------->YAB1   <-------TEIL   <---------AHL20(1) --------->ANAC58  <------ZmHOX2a(2)    <---------AHL20(2) ------->TEIL     --------->AHL20(2) --------->ANAC58    ------->TEIL                             --- --------->ARR14(2)    --------->AHL20(2)        --------->ANAC55(2)                      --------->AHL20(2) <---------ARR14(2)   --------->AHL20(2)    <----------DOF2  ------->TEIL       >>>>>>>>>GT-1     --- ---->ATHB12--------->LBD16   ----------->GT1    ----------->RAV1(2)         ----------->GT1    <---- ---WOX13(1)----------->GT1  <---------TOE2(3) <-----------GT1       <---------YAB1       --------->YAB1 -------WOX13(1) --------->AHL20(2)  --------->ANAC46   <---------AtLEC2<---------YAB1   <---------ATHB12   atggatccataaaccggaaataaattaaaataatgttacaagccaacttttacctgatgcatgtatcaattcttatttttggttaatatcaataatatgc  17201600                                            <---------ICU4                                         --------->YAB1                                     <---------RVE1(1)                  >>>>>>>>>CBP60g                                     --------->GLK1(1)                  >>>>>>>>>SARD1                                    <---------GLK1(2)              <---------TOE2(3)                                    <---------ARR11(3)          <---------AHL20(2)         <------MYB46(1)            --------->ARR11(3)          --------->AHL20(2)         <------MYB83      <---------MYB59 --------->ICU4   --------->AHL20(2)        --------->MYB59   --------->ANAC55(2)   <XXXXXXXXXXXXXXXXXXXXMIR1886.3      <---------MYB52(1)<-----------GT1 <-------TEIL        <---------AHL20(2)     --------->LBD16 ------>ANAC58   ------>ZmHOX2a(1)  <---------ARR14(2)  <---------RVE1(1)    <<<<<<<<<MYB2 ------>ANAC58  --------->TOE2(3)   --------->ARR14(2) --------->ARR11(3)  <------MYB83   <---------ARR11(3) -----AtLEC2  <---------YAB1      ----------->ARR10    <---------ARR11(3)  <------MYB46(1)--------->ARR11(3)   atgcatcagtttggttatcctaaaatttacataactcagatattcataatggtatgagatttttaatttaagaaatttggttttccgaaatagatattgg  17201700                                                                <-------TEIL                                                               --------->CCA1(2)                                                               --------->ARR14(1)                                                              <---------ARR14(2)                  ---                   --------->MYB52(1)                         --------->ARR11(1)                  ===                  ==========================HOX2a_HOX2a       --------->ARR14(2)            ---------                  ------>ZmHOX2a(1)  ------>ZmHOX2a(2)        <---------GLK1(2)        --------->HSFB2a(1)                 <---------MYB59  <---------ICU4            ----------->ARR10          <---------HSFB2a(1)          --------->YAB1         <---------YAB1       <---------ANAC58               ================         <---------YAB1          --------->ICU4       <---------ANAC46               ---------->DOF2       --------->YAB1          <---------ICU4         <---------ANAC58    ----------->RAV1(1)--------      <---------YAB1           --------->YAB1     ---------->DOF2      --------->HSFB2a(2) <---------LBD16   aatgttttatgataatattcctaactggtttgatcatgatcgcgagagtagcaaaagcgtgtaagattcgcttctccaacacaagtggaaagtcccggat  17201800                        --------->bZIP60(1)                --------->YAB1        ----------->RAV1(1)        ------>NtERF2   --------->TGA1a       --------->RAP2.3(2)       --------->DEAR3(1)       <---------ETT(1) --------->O2       --------->RAP2.3(3)       --------->RAP2.6(2)     <---------WOX13(1)      --------->RAP2.3(1)<-----------HVH21      --------->DEAR3(2)<---------bZIP60(1)     --------->At4g35610<---------TGA1a                                           --------->ANAC58     <---------At4g35610<---------O2--------->ATHB12                              --------->ANAC58 ------->DOF2   --------->AHL20(2) <---------YAB1                          --------->YAB1         --- =================================bZIP_DOF                              ---------->DOF2         ----- >LBD16----------->HVH21=============================================bZIP_DOF<---------YAB1  -------- =================================bZIP_DOF                         <------------CBF        --------->YAB1 ->LBD16<---------RAP2.6(3)   <------------CBF            <----------DOF2 --------->ICU4  -----------   taaagagagccgacacaataaaaacgacgtcggattgatgactggacatagacccaaacgctttagacacattgcaaagatgataagacactataaaaag  17201900                                                                                            ---------      --------->CCA1(2)      --------->ANAC58                                               ---------     --------->ARR14(2)      --------->ANAC46            --------->YAB1         <---------At4g35610 ------>ZAT18    <----------ID1                        --------->At5g28300      --------->At4g35610 ---->At4g35610 <------ZmHOX2a(1)                --------->ANAC58           --------->ARR11(3) -->DOF2      <---------TOE2(3)                  --------->ANAC58           <---------ARR11(3)     <- >TBP<---------ARR14(2)  *TSS--------->ANAC58  --------->ZAT6        ----------->HVH21      ---------   ctcactggatatggctaaggagacaaaacacacacaatctctctctctcacactcactgtaataaacacaaatgacgagttcttctgaatcaactcgcaa  17202000     --------->MYB52(2)             <----------DOF2  <-------GAMYB                     <---------DAG2 <------MYB83                      <---------DAG2 >>>>>>>>>>>>>>>>>LFY <------MYB46(1)                  ----------------->AGL1 ----------->GT1             --------------->AtSPL8 <---------MYB46(3)          --------->ZAT6    <---------ICU4 >ANAC58                   <-----------GT1    <---------YAB1 >ANAC58                --------->YAB1        --------->ICU4               --------->At4g35610 -------P           --------->AHL20(2)   ----------->GT1          <<<<<<<<<<MYB80 >ANAC46      <----------DOF2--------------->AtSPL3           <----------DOF2                  <-----   ggttggttaattgtttctttaactaaatataacagtacctttttggttataattccattgttgtctttggtttgatcatctctctcttgttcttactatg  17202100                               <---------HSFB2a(2)                            <--------P                      <---------ATHB12                       --------->MYB52(1)                  ------>MYB83                       ------->TEIL                        ------>MYB46(1)                      --------->ARR14(2)                   <---------ARR14(2)                    --------->ANAC46                       --------->ARR14(2)                    --------->ANAC58           <---------ANAC58                    <---------MYB52(2)         <---------ANAC46              --------->ANAC58                    --------->ANAC58           <---------ANAC58------>ZmHOX2a(1)           --------->YAB1     ----------->HVH21<---------ARR14(2) <-------TEIL    --------->AtMYB61   --------->ANAC58 ----YAB1          ------>NtERF2  ---------->DOF2--------->ALFIN1 ------>ZmHOX2a(1) <---------GLK1(2)   ttagggtctgaccaaaatcgccacgaaccggttgcagaaagagttcatggagtggcaaaccaatcctccttctggtttcaagcacagagtctctgataat  17202200                  <---------AHL20(1)                  --------->AHL20(2)                  --------->AHL20(1)              <--------HAHB4              --------->YAB1              <---------ICU4             <---------YAB1                                           <------MYB46(1)             --------->ICU4                                          <---------AtMYB61        <---------ANAC55(2)                                       <-----------RAV1(1)            <---        --------->ANAC55(2)                          <---------bZIP60(1)               --------->ATHB12       <-------TEIL                                  --------->bZIP60(1)              ===============     --------->At5g28300                             <---------TGA2(1)<------MYB83    <---------YAB1    ------->GAMYB <---------AHL20(2)         --------->GLK1(2)    --------->ATHB12    <------ZmHOX2a(2) --------->MYB52(1)       <----------DOF2--------->YAB1   --------->ICU4<---------ANAC46        <----   ctccaacggtacataatcattttattgtctttccttcgaatattgataatcggtgatgtaatgttgaattgttggtgtaaacagatggatcattgaagtg  17202300                    --------->ANAC58            --------->GLK1(1)            <---------GLK1(1)          <------ZmHOX2a(1)        --------->LBD16       <-----------RAV1(2)       <---------LBD16       <---------HSFB2a(2)            ------>MYB46(1)                                       ------>ZmHOX2a(1)       --------->HSFB2a(2) --------->YAB1               --------->LBD16                  ---------->ID1   <---------GLK1(1)--------->ANAC46  ------>MYB83    ----------->RAV1(2)           <---------GLK1(2)   --------->GLK1(1)--------->ANAC58<---------MYB59 --------->ZAT18            <---------ALFIN1 ------AtLEC2   <----------DOF2   -------->P      <---------GLK1(1)        --------->At4g35610 ================HOX2a_HOX2a ------->TEIL        <---------ANAC58          <---------At4g35610 ---TEIL--------->ANAC46  <---------ATHB12       <---------ANAC58   ------>ZmHOX2a(1) <-------TEIL   catggagttccaggaactctttacgccaatgaaacttaccaacttcaagttgagttccctgagcattatcctatggaagctccacaggttcgtcctctaa  17202400  Previous    Next  AGI:  At4g36410.1    Description:  UBC17 (UBIQUITIN-CONJUGATING ENZYME 17); ubiquitin-protein ligase. similar to UBC16 (UBIQUITIN-CONJUGATING ENZYME 16), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G75440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48290.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 17201925    to: 17202991    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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