Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ---------->DOF2                       ------>MYB83 --------->ANAC46                       ------>MYB46(1)   <---------ATHB12            --------->CCA1(2)                   ------->TEIL     --------->ANAC58              <---------TOE2(3)              --------->CCA1(2)  <-------TEIL                     <---------YAB1             <---------ARR14(2) --------->CCA1(2)   --------->AHL20(2) ---->YAB1<---------------------WRI1--------->ANAC58<---------AHL20(2)<-------TEIL <---------ATHB12 -   gtaatctccttggacgatatgaacctagccaaagatacaagaaatcaagatggattaattgttttgttaagatacaaaatatacaatcagggacttcaac  17175500                                                                       <---------ICU4                                                         <---------AHL20(2)     <-------MYC2                                                      <---------ICU4   -------->HAHB4                                            --------->ANAC58          <---------ATHB51               -------->HAHB4               --------->ANAC46 --------->YAB1     ------->MYC3              <---------YAB1                --------->ANAC55(2)       <---------ATHB12  <---------MYB59            --------->YAB1                  --------->ANAC58 <---------ICU4     <-------MYC3          --------->AHL20(2)   --------->ALFIN1      <---------YAB1   <---------YAB1  <---------ARR11(3)          --------->AHL20(1)  ------->MYC3  <---------ANAC55(2)<---------MYB52(1) --------->At4g35610         --------->YAB1       <-------MYC3 ------->TEIL  --------->AHL20(2)     ------->MYC2  <----------ID1  ----------->GT1   <---------ANAC46 --------->ICU4   --------->ICU4  --------->ARR11(3) --------->DOF2--------->YAB1<---------ANAC46      --------->YAB1   <---------ICU4--------->ZAT14   aaaaaagacaaaaataataatagaaaaaacaacgtgtggcctctgtacgtaaaacataattaatcgttactaattattcccatgtgcagaccttactgat  17175600                                       ------>MYB83                                       ------>MYB46(1)                                     <---------MYB46(2)------>ZmHOX2a(2)                 <---------GLK1(2)   <---------MYB59 --------->ARR11(3)         <---------AHL20(2)       <-----------GT1    <---------ARR11(3)        --------->AHL20(2) --------->TOE2(3)       <---------YAB1          --------->DAG2     <----------DOF2       --------->TOE1(3)    <---------AHL20(2)        ---------->DOF2   ---------   attgatacttttaaattcagaaacttaaaccctaaattaccaaacacaaatttatgatctaagaaccagaaaatcaaaaagtagaactaagaaatcaaaa  17175700                                                                      --------->At4g35610                                                                      <---------At4g35610                                                                      <---------ZAT18                     <---------LBD16                                  --------->ZAT14                    ------>MYB46(1)                                  --------->ALFIN1                    --------->MYB52(1)                           <---------------------WRI1               <-----------GT1                                   --------->At4g35610              <---------YAB1                                     --------->ZAT2            <---------ICU4                                       <---------At4g35610     --------->LBD16--------->ZAT2                               <---------ZAT2    <---------ANAC58    <---------HSFB2a(2) <------NtERF2                     <---------YAB1           <---------ANAC46    --------->HSFB2a(2)--------->LBD16  --------->HSFB2a(2) <-------GAMYB   ---------->DOF2    <---------ANAC46------>MYB83 --------->DAG2      <---------At4g35610 ------>NtERF2   <---------LBD16--------->MYB46(3)    <---------HSFB2a(2)<---------MYB46(3)      <---------ANAC58 < >YAB1     --------->ICU4       ---------->DOF2      --------->At4g35610--------->ZAT18             -   cctgttccggagcattatgaccagccggagatggaaaagtttcgagagacatctcagttgatggttgagctgtgcggacaaagttgcttgttgttccact  17175800                                                                              --------->At4g35610                                                                           <---------At4g35610                                                                    --------->YAB1                                                                   <---------YAB1                                                                ------>ZmHOX2a(2)                                                     =========================HOX2a_HOX2a    <---------ZAT14               --------->ANAC58   ==================HOX2a_HOX2a ---------ICU4--------->ICU4      ----------->GT1    ------>ZmHOX2a(1)    <---------DEAR3(1) -------->ATHB12                  --------->ANAC58  --------->TOE2(3)  ------>ZmHOX2a(2)   attgattacagtggcaatgcttagaaacacaaaaacaagtaaaattttgttcatcctcatatttgatctatgatcgtcgctgcttaaaaagttttgagta  17175900                                                                                           --------->DAG2              <---------YAB1             <-----------TBP                                  ---------->DOF2   <----------DOF2            ----------->HVH21        <------------CBF        ---------->DOF2   tgtttctttctgttttctgattaaacgtatgggtgacaacgttttatatagaacttaaattgaagttttttttttttttgcaaaagaagagataaagttg  17176000          --------->KAN4(2)          --------->ARR14(2)          <---------ARR14(2)                                            --------->YAB1         --------->HSFB2a(1)                                     <---------TOE2(3)         <---------HSFB2a(1)                                 <------------CBF         --------->KAN4(1)                                  <---------MYB46(3)                  <----         <----------TaMYB80    <---------YAB1              <---------MYB52(1)    <---------ARR14(2)         <---------KAN4(1)    <-----------TBP             --------->At5g28300    <---------TOE1(2)        ---------->TaMYB80 <---------GLK1(2)          ------------>MYB.PH3(1)    --------->ARR14(2)        <---------KAN4(2)  --------->ARR14(2)   <---------ARR11(3)     <---------YAB1           <----   ---------->DOF2        <------ZmHOX2a(1)     --------->ARR11(3) <---------GLK1(2)<-----------GT1   gattttaaagaatattcgaatagaaataggattcttatagcctagttatagatattaaacggttattgagattatcatggtcgtattttcgaaacaaact  17176100                         --------->TOE2(1)                       --------------->AGL15                    <-----------GT1      <-----------GT1                              --------->YAB1                <--------HAHB4          <-----------GT1                 --------->ANAC58        <-----------RAV1(1)            <---------AHL20(2)               --------->ANAC46       <---------TOE2(3) --------->TOE1(1)                       <------MYB83 ---------->DOF2 -----DAG2      <---------ICU4        --------->AHL20(2)         <------MYB46(1)<---------TOE2(3) ------DOF2    --------->ICU4   --------->YAB1      ---------->DOF2     --------->ANAC58 <---------ICU4   ttttgggataatgttgcataattaacctcgtatagcataattttatcgcttcttaaaagtcaaaatttggtttcaagtcataaaggtttcataatttagt  17176200                                                                           --------->AHL20(2)                                                                  ------>NtERF2                                                                  ----------->RAV1(1)                                                                  <---------RAP2.6(3)                                             ----------->GT1     --------->ATERF1(2)                                         --------->AHL20(1)      <---------ETT(2)                                       <---------AHL20(1)        --------->At1g77200                               ----------->GT1                   <---------ATERF1(2)                          <---------DAG2 <---------AHL20(1)      <---------ETT(1)               <---------MYB52(1)      --------->AHL20(1)        --------->RAP2.6(2)        <--------ATHB1    <----------DOF2--------->ARR11(3)    --------->At4g35610       --------->ICU4  <-----------GT1--------->AHL20(2)       <---------At4g35610   ttaaggggaataattcagttattttttactttattgtaaaatatatattggaaaaatagctattctgccgacaaaaaaaaaatagctattctagggtatt  17176300                      <---------ARR11(3)                      <---------GLK1(2)                      --------->ARR11(3)                                                       <-----                   <---------TOE2(3)                      <---------YAB1                       ------                  ---------->DOF2                --------->DAG2                                ------                <---------YAB1          <---------LBD16   <---------AHL20(2)             --------->TOE2(3)          <---------AHL20(2)        <-----------GT1     --------->YAB1                  --------->YAB1          --------->AHL20(2)      --------->AHL20(2) <----------DOF2    --------->AHL20(2)    <------       <---------AHL20(2)  <-----------GT1      ---------->DOF2     ----------->GT1<---------YAB1   tctctcgatttttttaatattaaagattttctccaatttaacttcggagaaaaagcttttataatttacgaagaaaaaatagtttatgaaacataaatat  17176400  Previous    Next  AGI:  At4g36350.1    Description:  ATPAP25/PAP25 (purple acid phosphatase 25); acid phosphatase/ protein serine/threonine phosphatase. similar to ATPAP6/PAP6 (purple acid phosphatase 6), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT1G56360.1); similar to purple acid phosphatase [Medicago truncatula] (GB:AAX20028.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Purple acid phosphatase-like, N-terminal; (InterPro:IPR008963); contains InterPro domain Purple acid phosphatase, N-terminal; (InterPro:IPR015914) Range:  from: 17173740    to: 17175860    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36360.1    Description:  BGAL3 (beta-galactosidase 3); beta-galactosidase. Identical to Beta-galactosidase 3 precursor (BGAL3) [Arabidopsis Thaliana] (GB:Q9SCV9;GB:O23243;GB:Q0WLZ5;GB:Q42150;GB:Q42317); similar to BGAL5 (beta-galactosidase 5), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT1G45130.1); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL12 (beta-galactosidase 12), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G26140.1); similar to beta-galactosidase [Prunus persica] (GB:AAW47739.1); similar to beta-D-galactosidase [Pyrus pyrifolia] (GB:BAD91082.1); similar to unnamed protein pr Range:  from: 17176345    to: 17181264    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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