Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ----------->GT1                                              ---------->DOF2                                            <------ZmHOX2a(1)         <---------ICU4                  --------->LBD16         --------->YAB1                  --------->HSFB2a(2)        <---------ATHB12                <---------TOE1(1)                         <------NtERF2      --------->WOX13(1)          <---------ALFIN1                               ----------->RAV1(1) ------>ANAC58                    --------->ANAC46                               ------>NtERF2 ------>ANAC58                    --------->REM1(1)                      <---------WOX13(1) ------>ANAC46        <-----------GT1--------->DEAR3(1)          <---------AHL20(2)    ---------->DOF2   aaggaaaacaatcatcaccgcatttttcttcattctacacctccgaggaaaagaaaaaaatcacaaatttatctaattgatggcaccagtagagccaatt  17164700            ---------->DOF2     -------->P              <---------REM1(1)                                      <-----------HVH21  <---------ANAC58         <---------ZAT14             <---------AtLEC2      --------->YAB1  <---------ANAC58      <---------ANAC46   <---------ZAT14                   --------->AtMYB61 <-----   catagcttacctccaaaagcctatttgtgtgaagtagcattcgagtgaagaaactttggatgaacacgagcatgctcaaccatacctgtcaaatttcatc  17164800                                                                                     --------->ZAT2                                                                                     <---------ZAT2                                                                                     --------->At4g35610                            <---------YAB1                                           <---------At4g35610                         <---------MYB52(1)                                        <-----------RAV1(2)                       --------->YAB1                                        <---------LBD16                    <---------ICU4                                          ----------->RAV1(2)                   <---------YAB1 <---------ANAC46                          <---------ANAC46        <----------ID1 <---------ICU4                                       <---------bZIP60(2)   <-- --------->YAB1  --------->YAB1   <---------ANAC58                       ----------->HVH21   -------- ----At4g35610 <---------ARR11(3) <---------ANAC58             <------ZmHOX2a(1)  <---------At4g35610   tcatcaaaataccacaaaatcataatcgttacgcttgtgtgtgtgtgtgtgtgtgtgtaagagaaggagaaggaaatgacctggagcagctggattagta  17164900                                                                                 --------->ZAT2                                                                             <-----------TGA1                                                                             <-----------HVH21                                                                            <---------TGA1a                                                                            --------->TGA1a                                                                            <---------O2                                                                            --------->O2                                                                            <---------ANAC46                                                                            --------->bZIP60(1)                                                                            <---------bZIP60(1)                                                                         <---------MYB52(1)                                                                        <-----------HVH21                                                                       ===============MYC_MYB                                                                       ------->GAMYB                                               --------->ANAC58        --------->DEAR3(1)                                               --------->ANAC58       ================MYC_MYB                                             <---------ALFIN1         --------->MYB46(3)                                   ---------->DOF2                    <------------AtMYB77                                 <---------HSFB2a(2)                  --------->DEAR3(2)      <------MYB46(1)            --------->HSFB2a(2)                 =================MYC_MYB      <------MYB83        ------>NtERF2    --------->LBD16           -------->P  --------->At4g35610    <--------P            --------->LBD16  ------>NtERF2           --------->MYB46(3)--------------->AtSPL3   <---------MYB52(1)   <---------LBD16   --------->ANAC46      <------ZmHOX2a(1)<---------ZAT2 -------ALFIN1        <-----------GT1     <---------ETT(1) <---------HSFB2a(2)   <---------At4g35610 --->GT1  <------ZmHOX2a(2)------>NtERF2 <---------LBD16   --------->HSFB2a(2) <-----------RAV1(2)   acaccggtagggatcacgaagttttctccggccttccaaaagctccggcactctaggttttctcgaggagcaaccgtcgcgtcagcagtcgtacttggaa  17165000                    ------>NtERF2--------->DAG2                   --------->bZIP60(1)                   --------->ANAC58                   <---------bZIP60(1)        ------>ZmHOX2a(1)                   --------->ANAC58     ------>ZmHOX2a(1)       <-----------HVH21          <---------                   --------->ANAC46    <---------ALFIN1    <---------YAB1           --------->ETT(2)            <---------MYB52(1)<---------HSFB2a(2)         <-----------TGA1          <---------ETT(2)-        ---------->ID1        --------->HSFB2a(2)        <---------ETT(2)   <-----------HVH21    ----  <---------YAB1  --------->SPL7---------->DOF2  ------>ZmHOX2a(1)    <-----------HVH21    --------->MYB52(1)   cttgatgtttgtccattagggacgccatgcttcgaaaagctcctcttcctcctactccgtcgtcattgtcactgtcactgtcactgtcgagattaacgac  17165100                                            --------->At5g28300                                           ----------->GT1                                        <---------ATERF1(1)                                       ----------->HVH21                                       <---------DEAR3(1)                                       --------->DEAR3(1)                                     --------->LBD16                                     --------->ANAC46          --------->LBD16           --------->ATERF1(2)         --------->LBD16            <---------ATERF1(2)         --------->ANAC58          <---------LBD16         --------->ANAC58   ------>NtERF2<------NtERF2                                --------->DEAR3(1) --GT1  <---------LBD16  --------->LBD16------>NtERF2                              <---------ALFIN1 ------>GAMYB          <---------LBD16--------->RAP2.3(1)                     <---------ATHB12 ------->RAV1(1)<-----------GT1   --------->MYB52(1)    <----------ID1    ------------>CBF   aacagagactcccgcatttttcgactccggagccattaccggcgacggtaaaatcgaatcgacaaacaaattcgaattcaatgaaacaccgtcttctccg  17165200                                                                <----------DOF2                                                                <---------DAG2                                                               <---------ANAC58                                                          --------->ATHB12                                                          <---------ICU4               <---------YAB1                                         --------->MYB52(1)<------------CBF       <------MYB83                                     --------->ANAC58    --------->ICU4      <---------AHL20(2)                                     --------->ANAC58    <---------YAB1     <---------AHL20(2)               <---------DAG2       --------->DAG2   <-----------TGA1    --------->AHL20(2)    <-----               <----------DOF2     ---------->DOF2 ---------->ID1        <---------AHL20(2)  <-------      --------->STY1(2)    ---------->DOF2     <----------DOF2 <---------ANAC58   <------MYB46(1)   atttgactagatagcgactttttaagtaagaaagaagaaaagcaaacgtctttttcgtcatcattgcttttccatttttttatttggttatcagtctaat  17165300                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                      <-------MYC2                                                                                      ------->MYC2                                                                                      <-------PIF5                                                                                      ------->MYC3                                                                                      <-------PIF4                                                                                      ------->PIF5                                   <---------HSFB2a(2)                              ------->TEIL                                   --------->HSFB2a(2)                        --------->ARR14(2)     ---------->DOF2               --------------->AGL15                      <---------ARR14(2)   ------------>CBF     --------->ANAC46                                   ----------->TBP   --------  ----------->RAV1(1)   --------->ANAC58         <-----------GT1      --------->ANAC58<-------MYC4 -------CBF             --------->ANAC58 <---------ZAT6               --------->ANAC46<-------MYC3 --YAB1           <----------DOF2 ----------------->AGL1              --------->ANAC58------->PIF4   tgggccacaatgcccaaatactttacaagcccatttaccagaagtgttaagttactacttactactgtacatacgctacaaatatgcacatgctattaaa  17165400                                                        --------->TOE1(3)                     <-----------GT1                    --------->TOE2(3)                ---------->DOF2     XXXXXXXXXXXXXXXXXXXXX>MIR850                  <-------TEIL ->AHL20(2)   <---------YAB1     --------->AHL20(2)    ----------->RAV1(2) <----------DOF2     <-----   caaatacaagaacaccatgaaagttacaaaacaaaaaaaatcaagaccacaaaaaaaacctgaatcaaactagggttctttagattcaagatagaattaa  17165500                                                                              <---------AHL20(2)                                                                          <----------DOF2                                                                       <---------AHL20(2)                                                                <---------ZAT18                               ------>ZmHOX2a(1)                --------->ZAT18   <---------TOE2(3)      <---------At4g35610     --------->ZAT2--------->ZAT14              <-------   <---------TOE1(3)      <---------GLK1(1)     ------->PIF5    <---------ZAT14           <---------ARR11(3) ------GT1<-----------GT1------->TEIL           <-------PIF5 --------->ALFIN1--------->AHL20(2)   ctcttaacgttttaactaagcttgttgcatctccttcttcttagcatccacgagcagagcaaggtgtgcacatttacttttaaattcttccagttctttt  17165600  Previous    Next  AGI:  At4g36270.1    Description:  ATP-binding region, ATPase-like domain-containing protein. similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G36280.1); similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G36290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48278.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) Range:  from: 17161027    to: 17165136    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36280.1    Description:  ATP-binding region, ATPase-like domain-containing protein. similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G36270.1); similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G36290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48278.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) Range:  from: 17165334    to: 17169378    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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