Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ------>NtERF2                --------->ANAC46                --------->O2                <---------O2                --------->TGA1a                --------->ANAC58                --------->ANAC58                --------->bZIP60(2)               ------>NtERF2            ------->GAMYB            ==============MYC_MYB           --------->ANAC46         <---------ATERF1(1)       <---------ANAC46         --------->MYB52(1)       <---------ZAT2 <------ZmHOX2a(2)       --------->MYB46(3)         --------->At4g35610      --------->ANAC46            <---------At4g35610   --------->ZAT14       <---------O2           <---------ARR14(2) --------------AtSPL8 ----------->HVH21   <---------REM1(1) --------------AtSPL3<-----------HVH21 <---------ANAC46      ---------->DOF2                        < ------P<---------WRKY38(1)    <---------At4g35610  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ANAC46 ----GAMYB --------->ANAC58    --------->ZAT2   <---------ARR11(3)                  <-------GAMYB   - -----MYB46(3)--------->DEAR3(1)  --------->ZAT2--------->ARR14(2)                 <---------MYB46(3) ---->MYB55(2)<---------ALFIN1 <---------ZAT2  <------ZmHOX2a(1)                  <---------TOE2(3)<- --->ALFIN1--------->ANAC58    --------->At4g35610------>ZmHOX2a(2)        <-----------HVH21    -----   gttagtacagccaacgccacgccagtcacatggagctgctggtgttgaaggatcccatgaagttaaagcaccgagagggtcatggaggttgagtttaaac  17123600                                                          ----------->HVH21                                                ------->GAMYB                                             --------->MYB52(1)                                   <---------SPL7   <---------ANAC46                                  <---------ANAC46  --------->ANAC58                                -           --------->WOX13(1)     <---------ANAC58  <------NtERF2                                   < -----------HVH21                 <---------ANAC58  --------->ANAC58                                < -------->LBD16                <---------DEAR3(1)  ------>NtERF2 <------ZmHOX2a(1) --------->CCA1(2)- --------ANAC46               <---------At4g35610 <---------ANAC46                --------->ARR11(3)< ---->ANAC46               <-------TEIL    <---------MYB52(2) <---------LBD16     <---------ARR11(3)-   gccgtgagagcatcaatctcggcttgagattcatcggcgtatgagactaacggcgcgtaaatgaccaggaaaatgaagaacagagatatatccatggcca  17123700            <---------ZAT14                                       ----------->GT1            <---------ZAT18                                      <---------AtMYB61            --------->ZAT14                                <---------YAB1   <-----------RAV1(1)                                     --------->ICU4  ------>ZmHOX2a(2)                                     <------NtERF2 --------->CCA1(2)                                     ------>NtERF2 <------ZmHOX2a(2)                                    <---------ETT(2) -------->ARR14(2)                                    <---------bZIP60(1)                  <---------At4g35610 ---------ARR11(3)                                    --------->ETT(2)      <---------HSFB2a(2) ---------ARR14(2)                                    --------->bZIP60(1)   --------->HSFB2a(2) -------->ARR11(3)                                 --------->ALFIN1        <---------LBD16 --------->At4g35610 ---------AGP1                 <---------ANAC58   <---------HSFC1(2)<XXXXXXXXXXXXXXXXXXXXXMIR173 ---- -------->AGP1                 <---------ANAC58<---------ZAT14 --------->ALFIN1        <---------KAN4(2)   tagatctgtggcagtgaacaaaatgaaaacttagcttgaagaaggtgagagaagtgtcgccatgagtgtggtttttttctgggagagagaatgagcagaa  17123800           <---------TOE1(3)                              <---------ZAT18           <---------TOE2(3)                *TSS          <---------ZAT14          ---------->DOF2     <---------ARR14(2)          <------NtERF2                           <--      ----------->GT1         --------->ARR11(3)          --------->ZAT18           --------->AHL20(2)    ---------->DOF2           --------->GLK1(2)           --------->LBD16           <---------AHL20(2) ----------->GT1              --------->ARR14(2)        --------->ZAT18   ------->TEIL            <-- ------>DOF2    ---------->DOF2        <---------ANAC46 <---------ZAT18--------->AtLEC2  --------->YAB1   aaagagtaaagttaaagtaaaagaaatacaaaaatctggttctgtagataatttgaagtccgcactataatccatgcatttactaaaaaaatgatactat  17123900                               --------->AHL20(2)                               <---------AHL20(2)                               --------->AHL20(1)                              --------->AHL20(2)                             <---------YAB1                           <--------HAHB4                           --------->YAB1                           <---------ICU4                          <---------ATHB12       ----------->GT1    <---------YAB1      ----------->GT1     --------->ICU4 --------->AtLEC2    <---------ANAC46<---------YAB1      ------>ZmHOX2a(1)                          <-----------GT1 ---------RAV1(1)<---------YAB1<---------AHL20(1)                    *TSS ----------->GT1 -------MYB46(3)--------->TOE2(3)<------------CBF                  ------------------------>ANAC81   ttgttggaggggaaaaaacattattctaatcattatattgtccttgcaagtttttttttttaaaaacaaatacaaacagagaaaatcacattattttgtt  17124000                                                                     <----------DOF2                                                                    <---------ANAC58                                                                    <---------ANAC58                                                               <---------ANAC58                                                               <---------ANAC58                                                              --------->ZAT2           <-----------HVH21                                                         <------NtERF2                --------->AtMYB61                                                       --------->ETT(2)            <---------ALFIN1                                                       <---------ANAC46          -------->P                                                       <---------ANAC58         <-----------GT1                                          --------->ANAC46<---------DEAR3(1)  <---------ANAC58          <---------ALFIN1               <---------LBD16<-----------HVH21 <----------DOF2         --------->ZAT18  <---------DEAR3(1) <---------ANAC46 <---------ZAT2  <---------ANAC58 ------         <---------WRKY38(1)    <------ZmHOX2a(2)      <---------ANAC58  <---------ANAC58      <-----         <---------ZAT18 <---------LBD16 <---------At5g28300<------NtERF2<---------ANAC58  --------->ANAC46   ttgttttctggtccactcgttttaaactacggcgatcgattttcacggcgagaaatgtcgtcggagcttggctttgctttacttaccaccttcacggtgc  17124100                                                             <---------------AGL15                                                             --------------->AGL15                                                            ----------------->AGL3           <---------TOE1(3)                 <---------GLK1(1)  --------->DAG2   <---------ANAC58                          --------->GLK1(1) ---------->DOF2----------->HVH21   <---------ANAC46                        <------ZmHOX2a(1)----------------->AGL2   <---------ANAC58                      <---------TOE2(2)  ----------------->AGL1  ---------->ID1                         <---------TOE1(2)  ----------------->AG                   <- --->ABI4(2)  <----------DOF2         --------->TOE1(1)<---------ANAC58 --------->ANAC58           -- ----ZAT18<-----------GT1             --------->TOE2(1)<---------ANAC58 --------->ANAC58   --------->At4g35610   tcttgtcgtatttaagcttttctaatgggttactgcaacctcgtaggatttctcatggattgtccaaaagtagcaagtacttgacgagggatgagctctg  17124200                    <---------ZAT14                --------->ZAT6         --------->TOE2(3)         --------->TOE1(3)         --------->TOE1(2)                           <---------MYB52(1)  --------->ANAC46  --------->ZAT14                <---------ANAC58 --------ZAT18 <------ZmHOX2a(2)     --------->WOX13(1)   <<<<<<<<<TBF1                 <---------MYB52(1) ------->ZAT14--------->ARR11(3)   <---------ATHB12<---------ANAC58                <----------DOF2   gttcactcaaaccttagatcactactctccatctgtaatcaatcttcccaatttcgtttcttcttcgattttagtttctgtttctctttcgttattgaaa  17124300                                                          <------ZmHOX2a(2)                    <-----                                                         <-----------ARR10                <---------ARR11(3)                                               --------->AHL20(1)                         <---------ARR14(2)                                               <---------AHL20(1)                         --------->ARR11(3)                                  --------->At4g35610    --------->ARR14(2)               --------->ARR14(2)                                  <---------At4g35610    --------->ARR11(3)               <----------                                <-----------RAV1(2)      <---------ARR11(3)               --------->ARR14(3)                             <---------ARR14(2)--------->AHL20(2)                         <---------ARR14(3)                   ------>ZmHOX2a(1)          --------->AHL20(2)                         --------->RVE1(1)               <---------ARR11(3) <---------ZAT2        <------ZmHOX2a(1)               ------->TEIL       --------->At4g35610   --------->ARR14(2)<---------AHL20(2)                    <---------YAB1   <---------ARR14(2)   -------->P--------->ZAT2     <---------LBD16           <---------ARR11(3)   --------->ARR14(2)  <-----------GT1        <---------AHL20(2)               --------->ARR11(3)   ttcaaaattcgctgcaaaatcctagttaccagttccagctgtttctaattttatttcaggatcatcgcaaattcagacagagatactatgaatatcttga  17124400                                         <------NtERF2                                         ------>NtERF2                                        <---------RAP2.3(1)                                       <---------RAP2.6(2)                                       ----                                       <---------RAP2.3(2)                                      <----                                       <---------RRTF1(2)                                       <----                         <----------DOF2--------->LBD16                                         <----                      ------>MYB46(1)  <---------DEAR3(1)                                       <----                      ------>MYB83     <---------ANAC46                                 <---------CCA1(1)                    <---------MYB59   <---------LBD16                                   <---------RVE1(1)             --------->MYB52(1)  --------->ATHB12                                      <---------AHL20(1)            ------>ZmHOX2a(1)   --------->ICU4                                   <---------ZAT6<----- ----WRKY18(1)    ------->TEIL  <---------YAB1  --------->ARR11(3)    --------->YAB1   --------->ARR11(3) -ARR10     ----------->HVH21 --------->YAB1   <------ZmHOX2a(1)     <---------ATHB12  <---------ARR11(3)   ccatttacgagttcctgacggacctatctttctcatgatttgcggcgaaggaccttgcaatggaatcaccaataactatattagtgtaagatatttttcc  17124500  Previous    Next  AGI:  At4g36180.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G75640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48247.1); similar to putative receptor-like protein kinase [Capsicum frutescens] (GB:ABP88740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61046.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein k Range:  from: 17120088    to: 17123844    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36190.1    Description:  serine-type peptidase. similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT4G36195.2); similar to EDA2 (embryo sac development arrest 2), serine-type peptidase [Arabidopsis thaliana] (TAIR:AT2G18080.1); similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT4G36195.1); similar to unknown [Populus trichocarpa] (GB:ABK95760.1); contains InterPro domain Peptidase S28; (InterPro:IPR008758) Range:  from: 17123969    to: 17127021    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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