Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <-------TEIL                         --------------->AtSPL3                         <---------------AtSPL8                         <-------TEIL                                             >>>>>>>>>>GT-3b                      --------->CCA1(2)                                        ----------->GT1                     <---------ARR11(3)                                        <----------ID1                     --------->ARR11(3)             <-------TEIL   --------->ARR14(2)                <---------AHL20(2)                 --------->CCA1(2)         ---------->DOF2       <---------REM1(2) --------------->AtSPL8   <---------ARR14(2)   --------->LBD16           <---     --------->ZAT14 --------->AHL20(1)           --------->ARR14(2)  --------->ANAC46           <--- <-----------GT1----------->TBP          <---------AHL20(2)        <---------ARR14(2)            ---- -------->AHL20(1)  --------->AHL20(2)   --------->AHL20(2)       <---------GLK1(1)             <---- --->AtSPL8     --------->AHL20(2)       --------->YAB1           --------->GLK1(1)             -----   aatatactatacacacatataaatatatacgtacaaattcgaattatatgcagatacaaattactagggtatccgaaaaaaaagaaaaatataggtatta  17113700                                                                                                  ---                                                        <---------YAB1                            ---                                                       <---------AHL20(1)                    <-------                                                       --------->AHL20(2)                    --------                                                       <---------AHL20(2)                    --------                                                   <---------RVE1(1)                         --------                                    --------->AHL20(2)--------->YAB1                    <---------WRKY45                                   --------->YAB1  <---------CCA1(1)                    <---------WRKY12                                  --------->AHL20(2) <---------YAB1                     <---------WRKY38(1)                           <---------YAB1         --------->ARR11(3)                   --------->WRKY18(1)   <-----------GT1       <---------ICU4    --------->TOE2(2)                          <--------ZAP1 ---MYB46(1)             --------->YAB1    --------->TOE1(2)                          <-----------HVH21 ---MYB83  <-----------GT1 --------->ICU4--------->MYB52(1)                         ------>ZmHOX2a(2) ------->GT1            <---------ATHB12--------->RVE1(1)          --------->ANAC46<------ZmHOX2a(2) -----TOE2(3)   ------->TEIL--------->YAB1----------->RAV1(2)  --------->CCA1(2)  <---------ARR14(2) ---->MYB59--------->MYB52(1) <---------YAB1      <---------ARR11(3)              --------->ARR14(2)   ggtttatacaaattaacgagccttgaatcatgataaataaaaatacctgagagatattataatggatatacaaaacattatgcagatcggtcaacacgac  17113800                                                                             ------->MYC3                                                         <------MYB83        <-------MYC4  ---------->DOF2                                        <---------ANAC58    <-------MYC3 ------>ANAC58                                           <------MYB46(1)     <-------MYC2 ------>ANAC58                  <----------ID1           <---------ANAC58    ------->MYC2 ---ID1              ----------->GT1               <---------AHL20(2)      ------->TEIL ->ANAC46  --------->ANAC58   <------ZmHOX2a(1)  <----------DOF2    <---------AHL20(2) ->ANAC58  --------->ANAC58   ===================HOX2a_HOX2a       --------->YAB1 ->ANAC58--------->TOE1(2)---------->DOF2 <------ZmHOX2a(2)       --------->AHL20(2)            -----   aagctaaagaaccaaggaaaatatagaaaaaaggacgacgagagatcgatgctttaatttggtgcaaaataaaaatgcacatgtaagttgatgagacgat  17113900                                     <------MYB83                                   --------->ZAT18                           --------->LBD16   <---------DAG2                         <---------ZAT18                          <---------ANAC46<-----------GT1               --------->CCA1(2)    <-------          --------->At4g35610        <------MYB46(1)                   <---------ARR11(3)   <--------          <---------At4g35610       <---------TOE2(3)                  --------->ARR11(3)   <--------          ----------->RAV1(2)--------->REM1(2)<----------DOF2     --------->YAB1   <------ZmHOX2a(1) ---->AtLEC2        ---------->DOF2 --------->MYB59     ----------->RAV1(2)       --------->ANAC46   gcaaatggactcttctgagcttgaaagcccgtgtaaattaggttttaccttttcttcaacctgtggaattatagatatgtgtataggacactatttactc  17114000                                                                 --------->REM1(2)                      <---------MYB52(1)                         --------->ZAT14 ----------->GT1     <---------RAP2.6(3)                         <---------ZAT14 ----------AGL1     ----------->GT1      >>>>>>>>>TBF1          <---------ANAC46 -AHL20(2)   --------->CCA1(2)        >>>>>>>>>TBF1  ---------->DOF2           <-------TEIL ---GT1 ---------->DOF2            >>>>>>>>>TBF1 ---------->DOF2--------->ALFIN1            <--------   gtttggaaacaaaagaaacgagccgttatattaagaagaagaagaagaagtcaaagaaagatggctgtgtagaagatgatgttcatcgagagagagaact  17114100                                                                        ----------->HVH21         ---      ------>ZmHOX2a(2)                                          --------->ATHB12                 ---    --------->ARR11(3)                                          <---------YAB1                    ---    <---------ARR11(3)                      *TSS               <---------TOE2(3)               ------ -ZAT14              <---------ANAC46---------->DOF2       <------------CBF      ---------->DOF2 ----   gatattgatcttggttataagtttcggtgaatgtgaagagaaagagagagagagagtgagaaattgatgattcgatgacatataaaaggtatagagagtg  17114200                                                      <---------ALFIN1                                                   <---------ALFIN1                    <----------DOF2            <-----------bZIP910(2)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   <---------ANAC58           --------->TGA2(2)               <-------MYC3                  <-----------HVH21               ------->MYC3                 --------->ANAC55(2)               <-------MYC2                 --------->ANAC46               ------->MYC2                 --------->ANAC58               ------->PIF5                 --------->ANAC58            <---------ANAC46               --------->SPL7            <---------ANAC58               <-------TEIL            <---------ANAC58               ------->TEIL        <------------CBF                 <---------SPL7------>ZmHOX2a(1)                           <-     ------------>CBF                   <---------ANAC58                                        -----   <---------At4g35610                  <---------ANAC46                                        <----   --------->At4g35610                  <---------ANAC58                                       ------ ------>ZAT18  <-------PIF5            <---------------AtSPL3                                -------- ------>ETT(2)<---------ANAC58         --------------->AtSPL3                              <---------AHL20(2) ------>WRKY38(1)  <---------ANAC58    <---------------AtSPL8       <-----------GT1<----------DOF2<-- --->ALFIN1<---------LBD16 XXXXXXXXXXXXXXXXXXXX>MIR2112-3P      <----------DOF2    <---------DAG2 --- ----->ALFIN1 <---------ANAC58         --------------->AtSPL8<----------DOF2<<<<<<<<<TBF1  --------->AHL20(2)   tggaccgctcaattgcgcgtggctttctccatgtccccatttgcgtacgtcaccctcctcccgcttcttttcacattcttcttcactttttaaaaaaata  17114300               <---------AHL20(2)              --------->ARR11(3)              <---------AHL20(1)              <---------ARR11(3)           --------->YAB1   <------ZmHOX2a(1) --------AHL20(2)    <---------AHL20(2)                 --------->GLK1(1) ---->AHL20(1)--------->AHL20(1)                        --------->CCA1(2) -----AHL20(1)--------->AHL20(2)                       <---------ARR11(3) --->AHL20(2) <---------AHL20(2)  --------->MYB52(1)   --------->ARR11(3) ->AHL20(2)--------->AHL20(2)----------->GT1         <---------TOE2(3) -------AHL20(1)     <---------YAB1              <----------DOF2    <-----------GT1          <------- ------>AHL20(1) <---------AHL20(2)        ---------->DOF2       <---------ICU4  <---------YAB1 <----   tatattttagctataatatattttttattaggagtaaaacggagttaaagactttaagatatcaaacttattacttctgagttctgatttttcagattga  17114400                                                               <---------YAB1                                                               <---------AHL20(2)                 --------->ATHB12                    --------->YAB1         --------->ARR14(2)                          <---------ICU4         <---------ARR14(2)                         <---------ATHB12                       <---------GLK1(2)       ------->TEIL                               --------->WOX13(1)            <---------TOE1(2)    <---------YAB1       <-------TEIL            <---------AHL20(2)            >>>>>>>ZML2 --------->ARR11(3) --WOX13(1)      <---------ICU4                  --------->AHL20(2)         --------->AGP1 <---------ARR11(3) -----TOE2(3)    --------->ATHB51               --------->AHL20(2)       <---------ICU4<---------AtLEC2   tgtattatgaatatttgcataattgcatacatatttgaagaaaaactcaaattaatcatgttttttttattgtcatcagttctaggtttgcaagattttt  17114500                                                           --------->KAN4(1)                                                           --------->ICU4                                                           <---------KAN4(1)                                                           --------->HSFB2a(1)                                                           <---------HSFB2a(1)                                                          <---------KAN4(2)                                                        <------ZmHOX2a(1)                                                        ==============HOX2a_HOX2a                                                      <---------TOE2(3)                  ----------->GT1                     <---------TOE1(3)          --------->ARR11(3)                --------->ANAC46    --------->ZAT14       <---------AHL20(2)--------->ANAC58          <----------DOF2    <---------ZAT14       --------->AHL20(2)--------->ANAC58   ------>ZmHOX2a(2)   gcatactacagggatattggacgttaatataaatcgaagttatcacacgcacaattaaggaatgatccatttcttttagtcaaatatggtattcaattct  17114600  Previous    Next  AGI:  At4g36160.1    Description:  ANAC076/VND2 (VASCULAR-RELATED NAC-DOMAIN 2); transcription factor. similar to VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G18060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48242.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 17110750    to: 17114144    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36170.1    Description:  unknown protein Range:  from: 17113875    to: 17119837    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version