Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ------>ZmHOX2a(2)                                                                                          <---------ARR11(3)                                                                                          --------->ARR11(3)                                                                                     <---------ZAT6                               --------->TOE2(3)                                <----------DOF2                               --------->TOE1(3)          <---------ANAC58   --------->GLK1(2)                              ----------->RAV1(2)    <----------DOF2        <---------ARR11(3) ->ARR11(3)                 <-----------GT1     <---------At4g35610         --------->ARR11(3) --ARR11(3)          <-----------GT1    <---------GLK1(2) <---------ANAC58  <---------GLK1(2)       -   caaaacaaacaaaaatgctgaaataacattttacctgaaacagcttcttcagcgactttggcatgttgaagaatcaaagattctttagtgttgatctcag  17096200                            <----------DOF2                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                          <---------RVE1(1)                         <---------ARR11(3)                         --------->ARR11(3)                   ------>ZmHOX2a(1)                         <---------ARR14(3)                 ------>ZmHOX2a(2)                         --------->ARR14(3)               --------->ARR14(2)                         --------->ARR14(2)               <---------ARR14(2)                         --------->AGP1               ----------->RAV1(2)                          --                         <---------ARR14(2)           <---------At4g35610                          <- -------->ZAT18    <----------DOF2                  <-----------GT1                     ------->TEIL   agtgagcaagagtgagtttttctttaagatctttaacttgaacttcaaacaatttgacctgatcctccattctactcatatgtgtgtatgaatccatagt  17096300                                          <---------ATHB12                                    --------->ANAC58                                 <<<<<<<GRF7                               ------>ZmHOX2a(1)                               ----------->HVH21 --------->ANAC58                             ----------->RAV1(2) --------->ANAC46                                 <--                             <---------At4g35610 --------->ANAC58                            -------- ------->At4g35610    --------->ZAT6--------->ANAC46                 --------->YAB1         --------- --------At4g35610  <-----------GT1 --------->ANAC58    ---------->DOF2                 <---------GLK1(2)   tatctgaacatagtttgtgtttttacacttctcctgacacacaaatcaaacacacaaaaaaagacttcaaatgaaaatttctatctcacagaaactgaca  17096400                                        ---------->DOF2                                       --------->AHL20(2)                               ----------->GT1                               <---------ANAC46                             <---------ANAC46                             ----------->GT1                             <---------ANAC58                             <------MYB83                             <---------ANAC58                 --------->ANAC58              ---------   --------->YAB1            <------MYB46(1)  ----------->RAV1(2)                  --------->MYB52(1)  <---------YAB1            --------->MYB111(1)   <---------GLK1(2)        ---------->DOF2  --------- -------GLK1(2)             --------->MYB46(2)<---------At4g35610       <------ZmHOX2a(1) --------->At4g35610 ->MYB52(1)                 <---------AtMYB61------->TEIL     --------->ANAC58   --------->MYB46(3) -->HVH21                   <---------MYB46(3)--------->At4g35610      <----------ID1   <------ZmHOX2a(1)   gattatcacaaaactatataaaacagaggtttggtgtaaaattaaagcacctgattctcaagagaagccaagtaggacaaagaacaaacaggagttgact  17096500                            <----------DOF2                           <---------ANAC58                      <---------ANAC58                         <---------ALFIN1                      <---------ANAC58                      --------->TOE2(3)                      =============================================MYC_MYB                      <----                      =================bZIP_DOF           ------>MYB46(1)                       -----      --------->MYB46(3)   <---------ANAC46               ------>MYB83                    --------->YAB1      <---------MYB55(2)   <---------ANAC58               -------->P                    --------->AHL20(2) >WRKY38(1)           <---------TGA1a             <---------AtLEC2 --------->ANAC46    --------->YAB1 >WRKY12              <---------O2       <----------DOF2 <---------ALFIN1 <---------AHL20(2)<--------   cgattccaacaactggtttctcagtcgtggctttgtccgaagactttctcttccatggccaacctctaccctccattttttttgctccaaaataatagta  17096600                                                                                                 ----          --------->LBD16                                                                     -------      <---------ARR14(2)                                                                  -----------      --------->GLK1(2)                                                                   <----------      --------->ARR14(2)                                                                 <-----------     <---------GLK1(2)                                                                   ------------ --------->ZAT14                                                                         <----------- --------->At4g35610                           XXXXXXXXXXXXXXXXXXXX>MIR837-3P           <-------TEIL <---------ZAT14                            --------->MYB52(1)                      <---------TOE2(3) <---------At4g35610                   --------->YAB1                               --------------->AtSPL3 -----ZAT14                         --------->YAB1                                 --------->MYB52(1) ---->ZAT14                      <----------DOF2   ---------->DOF2               <---------MYB52(2) -------AtSPL8        ----------->GT1  --------->AHL20(2)                        --------->MYB46(3)   ctctgcagaatccgtagaagaaggaagaaaataagctttaataaaaaaacagacaaagaactgatagaagttttgaaatttgaactaacgtacaaaaaaa  17096700                     <-----------GT1                         <---------YAB1             --------->LBD16                               <---------AHL20(2)      <-----------ARR10                                   --------->ICU4      <---------ARR11(3)                               <---------AHL20(2)      --------->GLK1(2)                               --------->AHL20(1)      --------->ARR14(3)                         --------->LBD16      --------->ARR14(2)                        --------->ANAC46      --------->ARR11(3)  ------------>CBF      --------->ANAC58      <---------ARR14(3)<----------DOF2         --------->ANAC58 ------->GT1<---------ANAC55(2)                <---------LBD16 --->DOF2   <---------ANAC58                <---------ARR14(2)  <-----------GT1          <---------MYB52(1) ---->AGL15 --------->HSFB2a(2)             --------->ARR14(2)--------->YAB1       ----------->HVH21 -----AGL15 <---------HSFB2a(2)       ----------->RAV1(1) --------->AHL20(2)     --------->YAB1 ------AGL3 <---------ANAC58         ------->GAMYB    <---------AHL20(1)       ------------>CBF ----->AGL1 --------->ANAC55(2)      <---------ETT(1)----------->TBP       --------->TOE2(3)<-------- ------AGL1 <---------ANAC46       <---------At4g35610<---------ARR11(3)  --------->At4g35610 -------   ggaaacaaaatcttccgtaaatgttactttcaatttcatccgacaaaatcccgctatatatttattatactgtatcacctcaacaatgaccgttttgttg  17096800                                           <---------HSFB2a(2)                                           --------->HSFB2a(2)                                       <----------DOF2                                      <---------ANAC58          <------------CBF                                 --------->ATHB12              --------->ATHB12                                 <---------ICU4                <---------AHL20(2)                                <---------YAB1                <---------AHL20(2)              --------->LBD16   --------->ICU4                --------->AHL20(1)      --------->AHL20(2)              <---------ZAT14   <---------ATHB12              <---------AHL20(1)      <---------ATHB51             --------->ANAC46  <---------TOE2(3)              --------->AHL20(2)      <---------AHL20(2)     <----------DOF2         <---------AHL20(2)            ------>MYB83           <---------AHL20(2) <----------DOF2 --------->At5g28300  <---------ANAC58     ------>MYB46(1)        --------->AHL20(2) ---RAV1(1) <---------LBD16  --------->AHL20(2)          <---------MYB59  --------->ZAT18 --->ID1  <-----------GT1   --------->AHL20(2)        <-----------GT1---------->DOF2--------->YAB1   tttctttctttttttccgcagtgattcacatttaatgatttctttccaaaactatgtaaccaaatttattgaaaagtctactaaaaaaataattcaaatc  17096900                                                      --------->At4g35610                                                 --------->YAB1                                                 <---------ICU4                                              --------->YAB1                                              <---------ICU4                                           <---------ICU4                                           --------->YAB1                                          <---------YAB1                                --------->AHL20(2)                                          --------->ICU4 -------->P                     --------->YAB1                       ------>ZmHOX2a(1)--------->YAB1--------->ZAT2              --------->ANAC58            <------NtERF2              <---------YAB1 <---------At4g35610         --------->ANAC46            --------->ATERF1(1) <-----------GT1 <---------YAB1      <---------ZAT18    <<<<<<<<<ARR2           ------>NtERF2    --------->TOE2(3)--------->ICU4----------->RAV1(1)    --------->ANAC58   ccatcgcaatgggcgcgagcgagtccttcacattaaacctgatcataatcatcatcagctaccacagtatcgcacttagaacacacacaatcaaattcaa  17097000                                                                                    -------->HAHB4                                               --------->At4g35610                  --------->ATHB12                                   <----------DOF2                                  <--------ATHB1                                --------->ARR11(3)                   --------->ANAC55(2)                                <---------ARR11(3)                   <---------ANAC55(2)                                --------->ARR14(2)           --------->ANAC58       <---------ICU4                                <---------ARR11(1)           ----------->GT1       --------->ICU4                                <---------ARR14(2)           --------->ANAC58      <---------ATHB12                       --------->YAB1          <---------At4g35610 --------->AHL20(2)          ----------->HVH21     <-----------ARR10          ---------->DOF2         <---------YAB1        <---------ANAC58       <---------ARR14(1)     --------->MYB52(1)--------->MYB52(1)        <---------ANAC58       <---------CCA1(2)<---------MYB59    <-----------GT1<---------TOE2(3)   acaaactttcgcttgacaatttcaatcgaaaccatatcttttcaagtttagctaactatcggaaagaaattacataccgagactaatgattccacagact  17097100  Previous    Next  AGI:  At4g36120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19835.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48232.1); contains InterPro domain Protein of unknown function DUF869, plant (InterPro:IPR008587) Range:  from: 17093216    to: 17096576    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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