Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <------ZmHOX2a(1)                                                                               <---------MYB46(3)                                                                              --------->ALFIN1                                                                             <-------GAMYB                                                                            <---------DEAR3(2)                                                                            <---------MYB46(3)                                                                            <------MYB46(1)                                                                            <------MYB83                                                                           --------->MYB111(1)                                                                           <---------DEAR3(1)                                                                           <---------MYB46(3)                                                                           <---------DREB2C(2)                                                                           <---------DEAR4(1)                                                                           --------->MYB55(2)                                                                           --------->MYB111(2)                                                  --------->REM1(2)        --------->MYB46(2)    --------->At4g35610                    ----------->HVH21              <---------ORA47(1)   <---------ARR11(3)                 ----------->HVH21                  <-----------HVH21<---------ANAC46 ---AGL3 ---------->DOF2            --------->O2 <---------MYB52(1)  <---------AtLEC2 <---------HSFC1(2)   cccgagagcttcaaagtcaggctctagtagtagtagccatgtgaagggaccgtttagagaagcgatagttttcatggtcggtggaggaaactacgtagaa  17083500                         <-----------HVH21                   <---------ALFIN1                   --------->ANAC46                ----------->HVH21                                                  <---------ZAT2                <---------ZAT18                                                    <---------At4g35610              <---------At4g35610                                              <---------At4g35610              --------->ZAT2                                          ------>ZmHOX2a(1)       <------              --------->At4g35610                                    --------->TOE2(3) <-----------RAV1(1)            <------ZmHOX2a(1)                   <---------ARR11(3)   --------->TOE1(3) --------->ALFIN1           <---------At4g35610      --------->At4g35610          <---------GLK1(1) --------->ZAT2         <-----------RAV1(2)        <-------GAMYB                --------->GLK1(1) --------->At4g35610 ---------->DOF2--------->ZAT18     <---------At4g35610    ----------->RAV1(1) --------->At4g35610   aataaaagttggcaggagctcacacagcgtcaagagacagttgagaacattatctatggagccacagaaatccttaatggaagctagctgtgttgggaca  17083600                                                    --------->AHL20(2)                                                    <---------AHL20(2)                  <---------ANAC46              --------->AHL20(2)                  <------MYB46(1)               --------->ATHB51                  <------MYB83                  <---------AHL20(2)                 --------->MYB46(2)          --------->YAB1                 <---------DEAR3(1)         <---------AHL20(2)                 --------->MYB52(2)         --------->AHL20(2)                 <---------MYB46(3)       <----------DOF2--------->MYB59              <---------SPL7              --------->TOE2(3)         ---------->DOF2      --------->ANAC46             --------->MYB55(2)   ------>MYB83 --------->ICU4  ----------->GT1         --------->ANAC46             <---------MYB46(3)   --------->AtLEC2 --------------->AGL15               <-----------GT1  --------->ALFIN1----------->GT1 ------>MYB46(1)  <---------AHL20(2)                <-----------GT1 ----ARF1   --------->ALFIN1 <---------WRKY18(1)<---------ICU4 --------->ICU4      <---------WOX13(1)   caaggtgggactaggtggttcggtgaattcttgaccatccaaaactttaattatttattttggtaatgtttaaagacttaatttgatttacacaatacta  17083700                                                     --------->AHL20(1)                                                     <---------AHL20(1)                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(2)                                      --------->AHL20(1)                                      <---------AHL20(1)                                      --------->AHL20(2)                             --------->AHL20(2)                                      <---------AHL20(2)                   <---------ANAC46                     <---------ARR11(3)        <---------AHL20(2)          <---------ANAC58         -                     <---------AHL20(1)       --------->YAB1               <---------ANAC58         <                     --------->ARR11(3)  --------->AHL20(2)             ---------->ID1          -----                 <---------AHL20(2)  <---------AHL20(2)                <-------GAMYB--------->AHL20(2)                --------->AHL20(2)   --------->AHL20(2)               <---------MYB46(3)        <----          <----------DOF2       --------->TOE2(3)<---------AHL20(2)   <-----------RAV1(1)--------->DAG2    --------->ARR14(2)    --------->TOE1(3)--------->AHL20(2)         --------->MYB52(2)---------->DOF2    <---------ARR14(2)    --------->TOE2(3)<---------AHL20(2)      ------------>MYB.PH3(2)   --------   gtactgtatatgcttttatttaatatatccataaccaaaataaatttatattaattttattttgaagtgagtttgttgcttaaaaaataaaaaagttaag  17083800                      <---------AHL20(2)                     <---------AHL20(2)      <---------ARR14(2)                     --------->AHL20(2)    <---------DEAR3(2)                  --------->ATHB51         <---------MYB46(3)              --------->LBD16    <---------WRKY38(1)         <---------GLK1(1)     <--------ZAP1 --------->ARR14(2)      <---------YAB1 <---------AHL20(1)    <------MYB83                  <----------DOF2   <----------DOF2<--------HAHB4 <---------WRKY12    --------->DOF5.7(2)<---------ANAC58 -------->ARR14(2)--------->YAB1 <---------WRKY45    <---------MYB52(1) <---------ANAC46 ---------ARR14(2)<---------ICU4--------->WRKY18(1) <-------GAMYB       <---------ANAC58   <---------GLK1(2) ---->At4g35610  --------->ICU4<-----------HVH21 ------>NtERF2      <------------CBF    *TSS      <-- -----At4g35610  --------->AHL20(2)        <------MYB46(1)         <---------ICU4     <----------DOF2 -->DOF2 --------->GLK1(1)  --------->HSFB2a(2)  --------->LBD16   --------->ATHB12<-----------GT1---   cagaacttttgatttccgaataattaatttctaggtcaacgaagttggttccgccgttaactagactaaagattgcgttttggatttactttggattcta  17083900                      --------->CCA1(2)                      --------->GLK1(1)               <---------WOX13(1)             <---------ICU4             -------->HAHB4             --------->ATHB12                                         <------MYB46(1)            <---------ATHB12                                          <------MYB83            <---------YAB1          --------->HSFC1(2)               <---------MYB46(3)            --------->ICU4          <---------HSFC1(2)    <---------ZAT18        <---------AHL20(2)       ---------->DOF2          --------->ZAT18        --------->AHL20(2)   ---------->DOF2             <---------ANAC46     <---------AtLEC2   <----------DOF2   --------->ARR14(2)       <---------AHL20(2)    <---------ANAC58 -------HSFC1(2)     <---------ARR14(2)       --------->AHL20(2)    <---------ANAC46    ----------->RAV1(2) ------>HSFC1(2)     <---------GLK1(2)      <----------DOF2         <---------ANAC58   ------->TEIL   agcttcttttttaaatgattgcagatttgcagaaagaaagcttcttcttttattaagttgtggacaaatggctggtactagcatggctgaacctgaaggt  17084000                             --------->ANAC46                           =================RAV                             --------->ANAC58                           --------->ZAT2                  --------->ZAT14  ---------->DOF2                      <---------ZAT2                  <---------ZAT14--------->ANAC58                       <---------At4g35610                <---------ZAT14  --------->ANAC58                       --------->At4g35610           ----------->HVH21 --------->ANAC58 <---------TOE2(3)         ----------->RAV1(2)     <-----------HVH21  <------ZmHOX2a(1)     <---------TOE1(3)<-----------HVH21                   ==   --------->ARR11(3)--------->At4g35610    ---------->DOF2   <----------ID1            <---------At4g35610   <---------ARR11(3)<---------At4g35610   <---------AHL20(2) ----------->GT1----------->RAV1(1)   <-   gtcaagatgtcccatgactgttcagaggaagacgcaagaaaggaattaaaggttttgttagatagggtcaaatcagctgcaacaagcttgagctatttga  17084100                         ------>ZmHOX2a(1)                         --------->LBD16                     <---------MYB52(1)                                                -------->P                     --------->ARR14(2)                                                ------>MYB83           --------->GLK1(2)                                                           ------>MYB46(1)           <-----------ARR10                                    <---------YAB1        ----------->RAV1(1)           --------->ARR11(3)                                 --------->YAB1        --------->DEAR3(2)          <---------GLK1(2)    <-----------HVH21     --------->REM1(1)              --------->MYB46(3)  ---------->DOF2    <---------ARR14(2)          --------->At4g35610          <---------ANAC46 ===============================HOX2a_HOX2a    --------->MYB46(3)     <<<<<<<<<<<<<<<<<LFY -----ZmHOX2a(2)   <---------MYB46(3)<---------DEAR3(1)    ---------->DOF2  <---------MYB46(3)   gatcaaaagctagaatcttggccgttcctggtctgtcactcggtgctcaacagctacaacttaaagatgatactacattggctggaaccaacaagaacaa  17084200                                      --------->ANAC58                <------ZmHOX2a(1)     --------->ANAC58                                              <     <---------TOE1(2)             --------->ARR14(2)                                         <------     <---------TOE2(2)             <---------ARR14(2)      <---------YAB1                 <------ZmHOX2a(1)   <---------ANAC58           <----------DOF2 <---------ATHB12<---------YAB1       <----------DOF2  -   <---------ANAC58  <---------ANAC46 --------->ANAC46   ----------->GT1--------->At4g35610--------->ALFIN1   ggattccttggttatagaggatggagtctatactttgaatacgctccaatccatagaaatggttattactgatgcgctggagtctcttttgaggagggtc  17084300                 ------->MYC3                 <-------MYC3        <---------ARR14(2)        --------->ARR14(2)                                                                   ------>ZmHOX2a(1)        --------->GLK1(2)                                                            --------->GLK1(2)       <---------GLK1(2)                                                             <-----------ARR10       <---------ARR14(2)                                                            --------->ARR14(2)   <------NtERF2<---------ANAC55(1)                                           <---------ARR14(2)   --------->At4g35610            --------->DAG2                              --------->ARR14(2)  ----------->RAV1(1)         <------ZmHOX2a(1)                --------->ANAC46      <---------ARR14(2) ---------At4g35610     --------->YAB1   --------->AHL20(2)    --------->ANAC58     <---------GLK1(2) -----HVH21     --------->ANAC55(2)----------->GT1 <------ZmHOX2a(1)      ----------------->AGL2 -------->At4g35610    <---------YAB1   <---------YAB1         --------->ANAC58   --------->LBD16   acagcggcagaatctgaaacgtgttctcataaggagaaggtgattatatgtgaggaagaaattacaaggaagacagtccaaatccagaatctgtccttga  17084400  Previous    Next  AGI:  At4g36105.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17990.1); similar to putative calcium-dependent protein kinase CPK1 adapter protein 2 [Mesembryanthemum crystallinum] (GB:AAR06858.1) Range:  from: 17083888    to: 17085123    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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