Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ICU4                    --------->YAB1                                      --------->AHL20(2)              --------->ARR11(3)                                    -------->ATHB1              <---------ARR11(3)                                    --------->YAB1       --------->ARR14(2)                                        --------->WOX13(1)       <---------ARR14(2)                               --------->YAB1  <---------AHL20(1)       --------->KAN4(2)                               <---------YAB1   --------->AHL20(1)      <---------HSFB2a(1)                            -------->ATHB1 <---------ICU4      --------->KAN4(1)                              --------->ATHB51   <---------AHL20(2)      --------->HSFB2a(1)                            <---------ICU4 --------->ATHB12      <---------KAN4(1)<---------ICU4                --------->ATHB12--------->TOE2(3)      <----------TaMYB80                            <---------ATHB51<--------HAHB4     ---------->TaMYB80--------->YAB1               --------->ICU4 --------->ICU4     <---------KAN4(2)<---------ATHB12              <---------AHL20(2) --------->AHL20(2) -->ATHB12   <---------GLK1(1)                      <---------YAB1 <---------ATHB12    --------->At4g35610   tacatagaatattcgatatctctaatcatcacaaatctatgaattagtttagaaattattgtaactccaatcattaaattgaattcaatagctgaagaaa  17080400                                                  --------->TOE2(3)                                                  <----------DOF2                                  <---------HSFC1(2)                   --------->TOE2(3)      ------>ZmHOX2a(1)    <---------YAB1                ----------->RAV1(1)--------->KAN4(2)         <---------ICU4               --------->ANAC46   --------->HSFB2a(1)        --------->YAB1             --------->ANAC58     <---------HSFB2a(1)       --------->ICU4    <---------GLK1(2)             --------->ANAC46     --------->HSFC1(2)<---------AHL20(2)     --------->YAB1             --------->ANAC58 ----------->GT1  <---------ARR11(1)        --------->GLK1(2)     >>>>>>          --------->ZAT14   --------->MYB52(1)<---------MYB52(1)    ---------->DOF2     ------->GAMYB   atttcgaaacagaacacacaacattagtagtaacgaaaattctcctccgtttctttaatcgaattatgaaaaaagaatcagaattttcaacagagaagaa  17080500                                                                ------>ZmHOX2a(2)                                                               --------->GLK1(1)             --------                   --------->MYB52(1)                          <------ZmHOX2a(2)   --------->MYB46(3)       --------->TOE1(2)<---------ARR14(2)                   <---------GLK1(1)--------->ANAC58       --------->TOE2(2)--------->ARR14(2)                   --------->GLK1(1)--------->ANAC58       <---------LBD16  <---------GLK1(2)      --------->ZAT14<---------ARR11(3)  --------->ANAC58      ----------->RAV1(2)      ------>ZmHOX2a(2)    <---------MYB46(3)     ---------->DOF2   -------- >>>TBF1      <---------HSFB2a(2)              <---------ZAT14--------->ARR11(3)  --------->ANAC58   gaattcaaacctgggtctagagaacggattcgatcggagagaacatgagcacagtcgttgcagagatctctagataagaaaggcaaccaattcgtaagaa  17080600                                                              <------MYB46(1)                                                              <------MYB83                                                             --------->MYB59                                      ----------->GT1    <---------ICU4                                    <---------ANAC58     --------->ATHB51                                    <---------ANAC46    <---------YAB1                      <--------                               <---------ANAC58         --------->ICU4                      ---------    --------->ANAC58   --------->ATHB12       --------->ARR11(3)                            <--------    --------->ANAC58  <---------YAB1<---------ANAC58  --------->YAB1   --------->ARR11(3)  ------>MYB46(1) ->ANAC58 --------->TOE2(3)    <---------ANAC58      ------>ZmHOX2a(1) <---------ARR11(3)  ------>MYB83 ->ANAC58 --------->YAB1 <---------WOX13(1)   <---------ARR11(3)     <---------MYB52(1)    <---------CCA1(2)   attcagaagcaatcttaagttcggatgattgatacttggcgagaaaaacatcttcctcataatttggttccattatcttctatcgcacaaaccaaatctc  17080700                                    --------->MYB46(3)      --------->LBD16           ------>ZmHOX2a(2)     <---------ANAC58          <------ZmHOX2a(2)     --------->ANAC55(2)<---------SPL7     <---------ANAC58 <---------------AtSPL3                                        <---------WOX13(1)    --------------->AtSPL8    --------->ARR14(2)                   <----------DOF2--------->ATHB12    --------------->AtSPL3    <---------ARR14(2)                 --------------->AGL15            --- ---ARR10            <------------------SPL14 --------->HSFB2a(2)<---------------AGL15--------->YAB1 >ARR14(2)           --------------------->WRI1        --------->DOF5.7(2)     *TSS<------------CBF -ARR14(2)<----------DOF2 <---------LBD16<----------DOF2    <----------DOF2    <----------DOF2    <--   gctgtttccgtactttagtttcagtttgtacggatcgaacaaacttttctcgagttcgtttactttgctcttttgagtcgtctttcattgataacaaatt  17080800                   <---------ICU4                                             <---------ANAC58                  <---------AHL20(2)                          ------>NtERF2   <---------ANAC46              <---------YAB1                                  ----------->RAV1(1)              ----------->TBP                                --------->DEAR3(1)          <---------ANAC58                                   --------->DEAR4(1)          <---------ANAC58                                   --------->DREB2C(2)          <---------ANAC46                                   --------->At1g77200            ------->TEIL      --------->GLK1(1)                                      --------->RAP2.3(3) --------->REM1(2)      <---------GLK1(1)          ----------->ARR10           <---------ETT(1) <---------ANAC55(2)     <---------ARR14(2)     --------->DAG2              ---------->DOF2       <---------ANAC58      -     <---------GLK1(2)<-----------GT1                ----------->TBP  --------->ARR11(3) <---------ATHB12     --------->ARR14(2)   ---------->DOF2       --------->ZAT6--------->ORA47(1)<---------MYB52(1)--- ------>MYB59 --------->AHL20(2)<--------P    <---------At5g28300 ---------->DOF2---------->DOF2----- -------TOE2(3)   --------->AHL20(2)         <-----------GT1--------->RAP2.3(1)--------->LBD16-------   taggtcggatttgcttataaatatttacaaaagggtagttttggaatttaccactacaaaacgccgacaaaagttctggtccgtgaagcccatgaatcaa  17080900                                   --------->AHL20(2)                             --------->ANAC58                             --------->ANAC58                             ----------->GT1                          --------->ARR14(2)                          <---------ARR14(2)                        --------->LBD16          <--------P                       --------->ANAC46      --------->DAG2                       --------->LBD16     ---------->DOF2                       --------->ANAC58                 --------->DOF5.7(2)<---------ICU4                            <---------REM1(2)    <-   <---------ALFIN1   <---------LBD16  <-----------GT1                    --------->ANAC46    <------ZmHOX2a(1) -------->PCF2  --------->TOE2(3) <---------AHL20(1)                    <---------ALFIN1  <---------ANAC46 ------>DAG2    --------->TOE1(3) <---------ARR11(3)               --------->At4g35610------->PIF5 -- ----->DOF2   <---------TOE1(3)   --------->AHL20(1)               <---------At4g35610<-------PIF5<-- -->YAB1      <---------TOE2(3)   --------->ARR11(3)               --------->ZAT2--------->ANAC58 ---   aaggcccacttaagtttacgttaacccggaaacgaaaatatttacaaaagggtagttttgtgatacaacagcttccactctacaagctcgtggtgaggaa  17081000                                                                        --------------->AGL15                                                                        <---------------AGL15                                                                       ----------------->AGL2                                                            ------>NtERF2                                                            --------->LBD16                                                           --------->LBD16                                   <-------TEIL           <---------ANAC46 --------->ZAT6    ------>ZmHOX2a(1)           <---------ANAC58     <-----------RAV1(1)============================= --------GLK1(1)                <---------ANAC58   <----------DOF2   <-----------GT1          <------ ------->GLK1(1)       <----------DOF2        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        --------->ARR11(3) -------ARR11(3)    <---------ARR11(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              <---------ARR11(3) ------>ARR11(3)    --------->ARR11(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      ---------->DOF2   gagctcctccaatgtgttttagtatcttttttatgcgttcatgtctgttttgactttgttgccgagaaattttactaaaactagtaaagctaagctcttt  17081100                                                                                xxxxxxxxxxxxxxxx>smallRNA(i)                                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)                                                                             <---------GLK1(2)                                                                            <------ZmHOX2a(1)                                                         --------->AtLEC2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                             --------->ATHB12xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxx                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------YAB1                                          --------------->AGL15        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   ---------->DOF2        <---------------AGL15     <---------ARR11(3)    xxxxxxxxxxx                 <---------WOX13(1)      <-----------------AGL3     --------->ARR11(3)   <----------DOF2              --------->AHL20(2)     <<<<<<<<<TBF1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxx =========================================================MADS_MADS<---------GLK1(1)xxxxxxxxxxxxxxxx>smallRNA(i) ----DOF2     <---------AHL20(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   gagtcgtttttcatgtttaattgaagcagtagattgttcttcttccactattggatgccatggaagtagaaatcttcaggattcttcttggctttgattc  17081200                                                                                                xxxxx                                                                                                <----                                                                                             xxxxxxxx                                                                                             xxxxxxxx                                                                                            <--------                                                                                     xxxxxxxxxxxxxxxx                                                                                   <---------ANAC46                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                <---------AtMYB61   <                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <-----------GT1                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ARR11(3)                               <---------RVE1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ARR11(3)                               <---------CCA1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->ATHB12xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xx xxxxxxxxxxx>smallRNA(fl3)---------->DOF2 <---------AHL20(2)<---------YAB1xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   tgagatttttgcaatttgaaagtttaatcaaaggctactgtgatttttttggatatttttctatgatttgtgattttgagttgtggtgttttctcttttt  17081300  Previous    Next  AGI:  At4g36090.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT2G17970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48224.1) Range:  from: 17078314    to: 17080779    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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