Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ANAC58                                                                               --------->ANAC46                                                                               --------->ANAC58 --------ANAC58                                                          <<<<<<<<<MYB2     --------->YAB1 --------ANAC58                            --------->ANAC58         <---------ANAC58      <-------TEIL ------DOF2                                --------->ANAC58         <---------ANAC58 --------->YAB1 --AtSPL3  <---------------AtSPL3         --------->TOE1(2)    <---------At4g35610  <---------ATHB12 ->AtSPL3--------->GLK1(2)            <----------ID1           --------->At4g35610--------->WOX13(1)<   ttcgcgctaagaaactgtacgatttgggagacactctaagggaacaagcgaaaaactagagagggagcttacttggttttcaagcaatcacattcgtaac  17059200                                              --------->ANAC58                                              --------->ANAC58                                        <---------At4g35610                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 <---------ARR14(2)                                 <---------ARR11(3)                                 --------->ARR14(2)                                 --------->ARR11(3)                                 --------->GLK1(2)                                <------ZmHOX2a(1)                              <---------TOE2(3)                     <---------CCA1(1)              --          <---------TOE2(3)   <---------TOE1(3)                     <---------RVE1(1)             <--  <------MYB83        --------->YAB1<----------DOF2<---------MYB52(2)     <-----------GT1 <---------GLK1(2)  <------MYB46(1)     ----------->GT1   --------->At4g35610        --------->ARR11(3)     <---------ARR14(2) --------P<---------TOE1(3)--------->ICU4   ---------->DOF2        <---------ARR11(3)     --------->ARR14(2)   aggttggatttttaggtttccaaatagtaattaaggatctttagctaaaagcaaataacaacaatagatgatatttttaccttggccttgtcgattctct  17059300                                        <------MYB46(1)                                        <------MYB83                                       <---------TOE2(2)                                       <---------TOE1(2)                                    --------->O2                                    <---------ANAC46                                    --------->TGA1a                                    <---------TGA1a                                    <---------O2                                    ==================bZIP_DOF                                   <------NtERF2                                  ------>NtERF2                                 ----------->HVH21                                       <---------MYB52(1)                                <------NtERF2--------->ANAC58            >>>>>>>>>>>>>>>>>LFY                                --------->ATERF1(1)                      <<<<<<<<<<<<<<<<<LFY                --------------------->WRI1 ---------->DOF2               ----------------->AGL1     -      --------->ANAC58         <---------ATERF1(1)               --------->ANAC58   --------->ARR14(2)      --------->ANAC58         ------>NtERF2 --------->ANAC58    --------->ANAC58   <---------ARR14(2) ------->RAP2.6(3)            <---------DEAR3(1)                 --------->ANAC46<---------ANAC46   - -------WRKY18(1)             --------->ALFIN1              <-----------HVH21 <---------ATHB12  <----   tgactgcaacgcgattgccattgttgttatcggtggcgacgtaggtaaagccaaactggccatgtccgagcaatttcccaatggtgtatcggttatcgaa  17059400                                     --------->ARR14(2)                                     <---------ARR14(2)                                --------->SPL7                                --------->SPL1(2)                               <---------SPL1(1)         --------->ANAC58      --------->SPL1(1)         --------->ANAC58     <---------SPL1(2)        --------->SPL7        <---------SPL7        ------->TEIL        --------------->AtSPL3              XXXXXXXXXXXXXXXXXXXXX>MIR831      <---------SPL7        <---------------AtSPL3           <---------ARR14(2)      <---------ZAT18      <---------At5g28300               --------->ARR14(2)     <---------ANAC58    --------->WRKY12          <-----------------AGL3     <---------ANAC58    --------->WRKY38(1)       ----------------->AGL3    --------------->AtSPL8------------------>SPL14 ----------------->AGL1   <---------YAB1    ------- ------>ZmHOX2a(1)    <---------ANAC58            ------>NtERF2------>ZmHOX2a(2)             <------- -------->TOE1(3)     <---------ANAC58 ------>ZmHOX2a(2)     <---------ARR11(3)          <-----------GT1 -------->TOE2(3)     <---------ANAC46<------ZmHOX2a(2)      --------->ARR11(3)         <---------YAB1 -----GLK1(1)        <-------TEIL--------->ANAC55(2)        <---------CCA1(2)        <---------YAB1   atccttagcgtacccaaaatcgatgcgtttaccgtacgggatccctccttggtgcctcaattggatcttcttcgtattcttcttgtttttattactaacc  17059500                                                             <-----------RAV1(1)                                                             --------->MYB55(2)                                                             <---------MYB46(3)                                                          <-----------HVH21                                                         --------->ANAC58                                                         --------->bZIP60(2)                                                         --------->O2                                                         ======================bZIP_DOF                                                         --------->TGA1a                                                         <---------TGA1a                                                       <---------ALFIN1                               <------ZmHOX2a(1)      <------NtERF2                            --------->YAB1           --------->ABI4(2)                    <---------ANAC46                ----------->HVH21                    <---------DEAR3(1)              --------->PCF2  <----------DOF2                  <-----------HVH21            --------->MYB52(1)  <---------ANAC58                 <---------ANAC46      <---------ARR14(2)<---------O2     --------->ANAC58     --------->GLK1(2)  --------->MYB46(3)    <---------ANAC58                <- ->P --------->ANAC58 <------NtERF2    --------->ARR14(2)--------->ANAC58<------ZmHOX2a(1)      ----- ----GT1     ----------->RAV1(2)    <---------TOE2(3)------>NtERF2<------NtERF2         --------->GLK1(1)   ttctcactcgccttcccctgcgtcggagaatcaggattagggttccgactaccggtgccacgtctggtggctttaggagacgagaaacagagacccatgt  17059600        <---------ANAC58        <---------ANAC58                                                                           <-        <------MYB46(1)                --------->At4g35610                                       <---        <------MYB83                   <---------At4g35610                    --------------->AtSPL8       --------->MYB59       <---------RVE1(1)                       --------->ALFIN1            ----       <---------MYB46(3)    <---------CCA1(1)                       <---------REM1(1)        ------>MYB83   <---------MYB46(3)       --------->ARR11(3)                     <------MYB46(1)          <-------- <---------ANAC46           <---------ARR11(3)                  <------ZmHOX2a(1)           <-------- <---------ANAC58           --------->ARR14(2)           --------->ICU4      <------------CBF ------>MYB46(1) <---------ANAC58           <---------ARR14(2)         ---------->DOF2   <---------At4g35610--------- --------YAB1              <------ZmHOX2a(1)      <------------CBF <------MYB83            --------->ANAC55(2) ------>HVH21            <---------ANAC46   <---------------------WRI1---------->DOF2    <-----------GT1   gatgcttgttgggtccctactctaatggaggatattttcacagatgagcgaaaattgcaaagatgaggaaggtgaagcagattgtacttgtttacctaat  17059700                                        --------->ANAC58                                        --------->ANAC46                                        --------->ANAC58                                     --------->ZAT18                                     <---------ZAT18                       --------->WRKY12        --------->TOE2(3)           <---------ANAC58                       --------->WRKY38(1)     <-----------GT1                <---------ANAC58             --------->ICU4 --------TOE2(3)                    <---------ANAC46            <-------GAMYB ------AHL20(2)                <-----------RAV1(1)             <---------MYB46(3) ----->AHL20(2)            <---------ARR14(2)                  ----------->GT1                   <--- -MYB59 --------->TOE1(3)  --------->ARR11(3)             --------->RAP2.6(3)     <---------ATHB12 -MYB46(2)     --------->MYB52(1)  <-----------------------TaNAC69(2)   <---------ANAC58       <----- >TOE2(3)------>ZmHOX2a(1)<---------CCA1(2)       --------->MYB46(3)    <---------ANAC58<---------TOE2(3)   taatgtttttccttagacaacgattttcaaatcttgttgcgcacgaaaataaaccactatttcggcagttattagcgttggccattcattttggttatta  17059800                               <---------HSFB2a(1)                               <---------HSFC1(2)                               --------->HSFC1(2)                       --------->REM1(2)                       <---------ZAT14                       --------->ZAT14                    <---------ANAC58                         <---------REM1(1)  --------->AHL20(2)<---------ANAC58           <---------ANAC58              --------->WOX13(1)  <---------AHL20(2)<---------ANAC46           <---------ANAC58  ------------>CBF                ---- ------YAB1    <---------MYB46(3)            <-----------GT1--------->ARR11(3)                ------- ------GT1   <-------GAMYB     --------->HSFB2a(1) ---------->DOF2         <---------ATHB12   -------   ccatttaaacttgtgagttgttgtgtgtagagaaacttccagtttttttacttgaaagatgagatgttgcaatacaaatcattcaaaaaacaaaaaccct  17059900                                                               <---------------AGL15                                                               --------------->AGL15                                                              ----------------->AGL3                                                              <-----------------AGL1                                                              <-----------------AG                                                              ----------------->AG                    --------->DOF5.7(2)                       ----------------->AGL2                   --------->TOE1(3)    --------->MYB46(3)   --------->ANAC46                  ----------->GT1     ------>MYB46(1)       -------->P----------->GT1          <---------At4g35610         --------->MYB52(1)<-----------ARR10          --------->At4g35610<-----------GT1            --------->GLK1(2) ----->MYB52(1)  --------->DAG2       ------>MYB83     <---------GLK1(2)                 --------->ANAC58 -->TOE1(3)      <---------TOE1(3)  --------->AtMYB61  --------->ARR14(2)                --------->ANAC58 -->TOE2(3)      <---------TOE2(3)  <---------MYB59    <---------ARR14(2)              ---------->DOF2   aacagagttttgagctcataaggttaactatttacaaacctaaccaattcaaactcagattctaccccaaaatggttaaaagtttccttcaaagcaagtt  17060000                                                                                                    <                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <<<<<<                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <<<<<<                                                                                               <<<<<<                                                                                               <<<<<<                                                                                               <<<<<<                                                                                               <<<<<<                                                     <---------ATERF1(1)                      <------                                                     ------>NtERF2                            <------                                                  <---------At4g35610                         <------                                                  --------->ZAT2                              <------                                                  <---------ZAT2                              <------                                               ---------->DOF2                                -------                                             <------NtERF2                                    <<<<<<<                                            ------>NtERF2                                     <------                                <---------TOE2(2) --------->At4g35610                         <------                         --------->YAB1     ----------->RAV1(1)                               <------                      --------->WOX13(1)   ----------->HVH21                                  <------                     ------>ZmHOX2a(2)     <----------ID1                                     <------                    <------ZmHOX2a(2)    <---------ATERF1(1)                                 --------                   --------->ARR14(2) <---------ANAC58                                     --------->ALFIN1    <---------TOE2(3)<-------TEIL     <---------ANAC58       --------->AtMYB61<----------DOF2--------  --------->TOE1(2)<---------ARR14(2) <---------ANAC46  ------>NtERF2   <---------ALFIN1 <-----------RAV1(1)   agaaccaaggatgccatgttggatccatcatacataggttgcgaggcgacaaagctgcctccaccaattcactcacacctctttgtacagactgtggcgg  17060100  Previous    Next  AGI:  At4g36070.1    Description:  CPK18 (calcium-dependent protein kinase 18); calmodulin-dependent protein kinase. similar to CPK16 (calcium-dependent protein kinase 16), calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT2G17890.1); similar to CPK28 (calcium-dependent protein kinase 28), calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G66210.2); similar to CPK28 (calcium-dependent protein kinase 28), calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G66210.1); similar to calcium-dependent protein kinase CDPK1444 [Medicago truncatula] (GB:AAX14494.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48212.1); si Range:  from: 17056910    to: 17059598    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36080.1    Description:  FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein. similar to FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein [Arabidopsis thaliana] (TAIR:AT2G17930.1); similar to hypothetical protein OsI_026134 [Oryza sativa (indica cultivar-group)] (GB:EAZ04902.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48218.1); similar to hypothetical protein OsJ_024349 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40866.1); contains InterPro domain PIK-related kinase, FATC (InterPro:IPR003152); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro Range:  from: 17059827    to: 17077631    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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