Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------SPL7                                                          <------NtERF2                                                        <---------DEAR3(1)                                                  <---------GLK1(1)  <---------HSFB2a(2)                                                 --------->ARR11(3)  --------->HSFB2a(2)                                         --------->ANAC58------>NtERF2        <------ZmHOX2a(1)                --------->ANAC58<-----------HVH21    ---------->DOF2                 <---------LBD16     --------->DEAR3(1) ----ARR14(2)               ----------->GT1     --------->YAB1    ------->TEIL         --------->GLK1(2) --->ARR14(2)        ---------->DOF2--------->TOE1(2)   <---------ANAC46      <---------HSFB2a(2)   ccgaagaaaaggattgaaatttcaaaagtcgagtaaaacctggaagcaaatgatatcggcgtcgaacgaatcgagaagtttgagaagagaatcaaactgc  17055000                                                                                         <---------MYB52(1)                                                                                       <-------------                                                                                       --------------                                                                                      ---------------                                                                                      ---------------                                                                                      ---------------                                                                                   --------->KAN4(2)                                                                                  <---------KAN4(1)                                                                                  --------->KAN4(1)                                                                                 <---------YAB1                                    <---------ARR11(3)                           <------ZmHOX2a(2)                                    --------->ARR11(3)                          <---------ARR11(3)                     <---------TOE2(3)                        <---------ZAT14   --------->ARR11(3)                     <---------TOE1(3)                        --------->ZAT14  --------->YAB1                    <---------DOF5.7(2)                       *TSS      <---------ETT(2)<----------DOF2                  --------->DOF5.7(2) --------->YAB1      <---------ALFIN1  ---------->DOF2       <--        <---------ANAC58        <-----------GT1    =====================================HOX2a_HOX2a        <---------ANAC58     --------->ANAC46      ------>ZmHOX2a(1)   --------->SPL7 <--------------   gaaactcgttgcctaaggccattaacgttgtaagtcactatcttcatcttctccttcttcccactgtagttcgttcgacaaagatcattcctttagggga  17055100                                                                           --------->ANAC55(1)                                                                           --------->ANAC55(2)                                                                           <---------ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                    ------->MYC2                                                                    <-------MYC3                                                                    <-------MYC2                                                                    ------->MYC3                                                                   --------->O2                                                                   --------->TGA1a                                                                   --------->ANAC55(2)                                                                   <---------O2                                                                   --------->ANAC58                                                                   <---------ANAC55(2)       ------->GAMYB                                                                   --------->ANAC58          --------                                                                   ----------->GT1           ========     <---------ARR14(2)                                            ==================================MYC_MYB    <---------CCA1(2)       --------->AGP1                         =================================MYC_MYB    <---------GLK1(1)       <---------ARR11(3)                 ----------------->PIF3(1)   <---------At5g28300  <---------ANAC58          --------->ARR11(3)                ----------->HVH21            ==========  <---------ANAC58    <-------GAMYB                         <-------GAMYB  --------->ANAC58-------->P --------->MYB59     <---------DEAR3(2)                     =================MYC_MYB      --------->MYB52(1) --AGL15             <---------MYB46(3)                    <---------DEAR3(2)           <---------MYB46(2) ->AGL15            <---------DEAR3(1)                     <---------MYB46(3)           <---------MYB59 -->AGL2           <---------ORA47(1)    ====================================bZIP_DOF   <---------MYB111(1) -->AGL1     --------->ATHB12            ---------->DOF2  <---------DEAR3(1)            <---------MYB52(2) -->AG      <---------TOE2(3)<------ZmHOX2a(2)          ------------>AtMYB77  <---------TOE2(2) ----------CBF<------------CBF------>ZmHOX2a(2)         =====================MYC_MYB  <-----------GT1 ---AGL1    <---------YAB1----------->ARR10     --------->At4g35610<---------TGA1a ----------->GT1   aattgggtatctctaagattggacggttgagatcttagaagactaaagtcagtagaatcgacggttgacacgtgaatacgtaagtttgtaactaaccgta  17055200                                --------->At4g35610                                --------->ZAT18                                <---------At4g35610                          --------->ALFIN1                         <-------MYC2                         ------->MYC3                         ------->MYC2                         <-------MYC3                         <-------PIF5                         ------->PIF5                              ----------->RAV1(1)                        <---------ANAC58                          <---------ALFIN1                        <---------ANAC58                      --------->SPL7                        <---------TGA1a                      <------NtERF2                        <---------ANAC46                     --------->ATERF1(1)                       ------>NtERF2                        <---------SPL7                      <---------ANAC58                      <---------ATERF1(1)                     --------->ATERF1(1)                   --------->DEAR3(1)                     <------NtERF2                        <------NtERF2                   <---------RRTF1(3)                     --------->ATERF1(1)                   <---------DEAR3(1)                    <---------ATERF1(1)                   --------->ALFIN1                      <---------DEAR3(2)         =========================bZIP_DOF               <---------ORA47(2)      <---------ARR14(2)         <----------DOF2--------->ALFIN1                 <---------RAP2.3(1)     --------->ARR14(2)      --------->ARR11(3)<------NtERF2--------->ANAC58    ------>NtERF2           <---------GLK1(2)      <---------ARR11(3)--------->TGA1a                 <---------DEAR3(1)     --------->LBD16     <---------GLK1(1)<---------ANAC46                <-----------HVH21 --------->ATHB51     --------->GLK1(1)<---------ANAC58               --------->O2 --------->AtMYB61      --------->ARR11(3)  <---------YAB1   <---------RAP2.3(3)               --------->TGA1a    <---------ICU4   <---------AHL20(1) ->TOE1(3)      <-----------RAV1(1)  --------->ANAC58<---------O2--------->MYB46(3) --------->AHL20(2) =================================MYC_MYB            <---------TGA1a   <---------YAB1 --------->AHL20(2) =================================MYC_MYB   --------->ATHB12------>NtERF2    <---------LBD16    -----   gcatatgatatcttttcaatggtggcgcgtggggagcacaagttattgatttgcctcgtcggcgtccaccaccattatcgccggatttttatatattcac  17055300                                                                                                *TSS                                                               <---------ANAC46        <---------TOE2(3)                                                               <---------ANAC58        <---------TOE1(3)                                                               <---------ANAC58       <-----------GT1          --------->YAB1  ------>MYB83                      <----------DOF2         <---------AHL20(2)    >>>>>>>>>TBF1         ------>MYB46(1)                <---------ARR11(3)      <---------ARR11(3) ---->ANAC46          >>>>>>>>>MYB2                   <----------DOF2            --------->ARR11(3)   gtagaagaagaatgagaagacgaaaaccaacttctacttcttctcagtggctctctctttatctttcttggagtttagttagagattttaacgttgcaaa  17055400                                                                                         <---------TOE2(2)                                                                                        <-----------RAV1(2)                                                                                    --------->ARR11(3)                                               <---------ICU4               --------->HSFB2a(2)                                              <---------YAB1        <<<<<<<<<TBF1   <-----------ARR10         <---------ATHB12                <---------At4g35610  <<<<<<<<<TBF1 <---------HSFB2a(2)     --------->MYB46(3)        --------->ARR14(2)       <---------At4g35610<---------LBD16    -------->P                 <---------ARR14(2)    <---------At4g35610  <---------LBD16<---------TOE1(2)   --------->WOX13(1)          ------->TEIL <---------At4g35610  <<<<<<<<<TBF1     <---------GLK1(2) <------ZmHOX2a(2)             --------->GLK1(2)     ------>ZmHOX2a(1) <<<<<<<<<TBF1<---------ARR11(3)   tggatcaaccaatgaaaccaaaaacttgctctgaatctgattttgctgatgattcctctgcttcttcttcttcttcttcgggacaaaatctcaggtttta  17055500                                                                              <---------------------WRI1                                                                            <---------MYB46(3)                                                                           --------->ALFIN1                                                                           <---------AtMYB61                                                                        --------->ALFIN1               <----------DOF2                                          <---------AtMYB61            <-----------GT1                                      --------->At4g35610       --------->ARR11(3)       <---------YAB1  <---------ANAC46 --------->ZAT2       <---------ARR11(3)       --------->ICU4  <---------ANAC58 <---------At4g35610   ---------->DOF2          <-----------HVH21   <---------ANAC58 <---------ZAT2 <----------DOF2   <---------AtLEC2     --------->YAB1         <------ZmHOX2a(1)                   <-   gtgcttaaagatgttaactttacatggctgtgtcatgtttattcatagtttcgtctaattacagaggagctgagatggtggtggaagtgaagaaggaagc  17055600                                       --------->CCA1(2)                <XXXXXXXXXXXXXXXXXXXXMIR413--------->TOE1(3)          ---------->DOF2           <---------ZAT6        <---------ANAC58            <---------ARR11(3)        --------->LBD16        <---------ANAC46           <---------ANAC58            --------->ARR11(3)       --------->HSFB2a(2)    <-------TEIL--------->At4g35610                        <---------CCA1(2)       <---------HSFB2a(2) --------->HSFC1(2)             <---------ANAC46     ----------->GT1      <---------LBD16      <---------HSFC1(2)          <---------GLK1(2)   ------->TEIL <---------MYB46(3)        --------->HSFB2a(1)   <------ZmHOX2a(1)       <---------ZAT18     <------- --------MYB52(1)          <---------HSFB2a(1) <---------TOE2(3)         --------->ZAT18 <----------DOF2   agtttgttcccagaaagcagagcgagagaagcttcgtagagataagcttaaggaacagtttcttgagcttggaaatgcacttggtatatatcttttcaca  17055700                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)                        <----------DOF2                        ------>ZmHOX2a(2)         <---------GLK1(2)                                    --------->CCA1(2)         --------->ARR11(3)                                   <------ZmHOX2a(2)         <---------ARR11(3)                                  <---------ARR14(2)         --------->ARR14(2)                                  --------->AGP1         ---------->DOF2 ----GT1 <---------ARR14(2)         <---------ZAT14          --------->ARR14(2) ----------->HVH21   agatgaatacagattttcaaaattttctttgaattgagtttagagtaatggtttctttctacagatccgaataggcctaagagtgacaaagcctcagttc  17055800                                                                                        <---------ANAC46                                                                                        <---------At4g35610                                                                                        ----------->GT1                                                                                    <-----------HVH21                                                                                   --------->TGA1a                                                                                   <---------O2                                                                                   <---------ANAC58                                                                                   <---------TGA1a                                                                                   ==================                                                                                   <---------ANAC46                                                                                   --------->O2                                                     --------->At4g35610           <---------ANAC58                                                  ===========================================bZIP_DOF                                           <---------WOX13(1)                 <---------GLK1(2)   <--                                 ------->TEIL     ---------->DOF2 --------->ZAT6 ------------->DYT1 <   tcactgatacaatacaaatgctcaaggatgtaatgaaccaagttgatagactaaaagctgagtatgaaacactatctcaagagtctcgtgaggtgatttg  17055900  Previous    Next  AGI:  At4g36050.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN69587.1); contains InterPro domain Exodeoxyribonuclease III xth; (InterPro:IPR004808); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); contains InterPro domain Zinc finger, GRF-type; (InterPro:IPR010666) Range:  from: 17051985    to: 17055062    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36060.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G19860.1); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G19860.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48211.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 17055396    to: 17056707    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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