Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->At4g35610     --------->ZAT2                                                                  <---------TOE2(3)     <---------ZAT2         --------->AtLEC2                                   <----------DOF2 <-----------GT1    --------->bZIP60(1)      ----------->RAV1(2)               <---------DAG2 ----------HVH21    <---------bZIP60(1)    <---------ALFIN1      --------->TOE2(3)  <-----------GT1 >DOF2       --------->ARR11(3)            --------->REM1(1)  --------->AHL20(2)   <-----------GT1   gtttcacagcttgaagatgctgacttcaccctgcaaaacgttgctacacctgcaaaaatttcaataacataaaaactccaactttttaacattttctcaa  17054700                                                                              --------->ANAC46                                                                              --------->ANAC58                                                                           <---------ZAT18                                                                           <---------ZAT14         --------->ANAC58                 <---------KAN4(2)                --------->ZAT18         --------->ANAC58           -------->P <---------------AtSPL3 <---------ANAC58       ---------->DOF2           <---------ANAC58             --------->ZAT6  --------->ANAC58     <-   --------->ZAT6     ---------->DOF2 --------->HSFB2a(2)<----------DOF2   --------->ZAT14        --- <-----------GT1--------->ZAT14  <---------ANAC58  --------->SPL7     <---------ANAC58     <-------TEIL   atttcactctaaagccactgaaggcaaagcttgatgcttaccagaataaccagtacgacctttctcactagtgcgagtgcacgagaaaaacgattcatac  17054800                            <---------ANAC58                     <-----------HVH21                  --------->At4g35610              --------->ARR14(2)              --------->GLK1(2)                         <-------TEIL                     <---------DEAR3(1)   <---------At4g35610      <---------ANAC58        <---------TOE1(2)                   <---------At4g35610   --------->At4g35610     <---------ICU4          ------>ZmHOX2a(1)                 <-------TEIL ----------HVH21  <---------At4g35610       <---------ANAC58                  --------->YAB1   <----- ------>ANAC46<---------ARR14(2)            <---------ANAC58                 <---------YAB1    ------   ccatcagctatcgccaaatctgctgtcaattcttgccttctcagtttcgtctcctagattcaaccagagtaatactcttatcatggattcatcggcgaaa  17054900                                                            <---------SPL7                                                          <------NtERF2                                                        --------->DEAR3(1)                                                  <---------GLK1(1)  <---------HSFB2a(2)                                                 --------->ARR11(3)  --------->HSFB2a(2)                                         --------->ANAC58<-----------HVH21        <------ZmHOX2a(1)                --------->ANAC58------>NtERF2    ---------->DOF2                 --------->TOE1(2)   <---------DEAR3(1) ----ARR14(2)               ----------->GT1     --------->YAB1    ------->TEIL         --------->GLK1(2) --->ARR14(2)        ---------->DOF2<---------LBD16     <---------ANAC46      <---------HSFB2a(2)   ccgaagaaaaggattgaaatttcaaaagtcgagtaaaacctggaagcaaatgatatcggcgtcgaacgaatcgagaagtttgagaagagaatcaaactgc  17055000                                                                                         <---------MYB52(1)                                                                                       <-------------                                                                                       --------------                                                                                      ---------------                                                                                      <--------------                                                                                      ---------------                                                                                   --------->KAN4(2)                                                                                  <---------KAN4(1)                                                                                  --------->KAN4(1)                                                                                 <---------YAB1                                    <---------ARR11(3)                           <------ZmHOX2a(2)                                    --------->ARR11(3)                          --------->ARR11(3)                     <---------TOE2(3)                        *TSS      <---------ETT(2)<----------DOF2                     <---------TOE1(3)                        --------->ZAT14   <---------ARR11(3)                    <---------DOF5.7(2)                       <---------ZAT14  --------->YAB1                  --------->DOF5.7(2) --------->YAB1      <---------ALFIN1  ---------->DOF2       <--        <---------ANAC58        <-----------GT1    =====================================HOX2a_HOX2a        <---------ANAC58     --------->ANAC46      ------>ZmHOX2a(1)   --------->SPL7 ---------------   gaaactcgttgcctaaggccattaacgttgtaagtcactatcttcatcttctccttcttcccactgtagttcgttcgacaaagatcattcctttagggga  17055100                                                                           <---------ANAC55(2)                                                                           --------->ANAC46                                                                           --------->ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                    <-------MYC3                                                                    ------->MYC3                                                                    <-------MYC2                                                                    ------->MYC2                                                                   ----------->GT1                                                                   <---------ANAC55(2)                                                                   --------->ANAC58                                                                   <---------O2                                                                   --------->TGA1a           ========                                                                   <---------TGA1a           ------->GAMYB                                                                   --------->O2              --------                                                                   =================================MYC_MYB     <---------ARR14(2)                                            --------->ANAC55(2)     ==========    <---------CCA1(2)       <---------ARR11(3)                     --------->ANAC58        -------->P    <---------GLK1(1)       --------->ARR11(3)                 ----------------->PIF3(1)   <---------At5g28300  <---------ANAC58          --------->AGP1                    ----------->HVH21           --------->MYB52(1)  <---------ANAC58    <-------GAMYB                         <-------GAMYB  --------->ANAC55(1) --------->MYB59     <---------MYB46(3)                     =================MYC_MYB    <---------MYB59 --AGL15             <---------DEAR3(2)                    <---------DEAR3(2)           <---------MYB111(1) ->AGL15            <---------DEAR3(1)                     <---------MYB46(3)           <---------MYB46(2) -->AG             <---------ORA47(1)    ---------->DOF2  <---------DEAR3(1)       ----------->GT1 ---AGL1     --------->ATHB12            ====================================bZIP_DOF   <---------MYB52(2) -->AGL1    <---------TOE2(3)<------ZmHOX2a(2)          ------------>AtMYB77  <---------TOE2(2) ----------CBF<------------CBF------>ZmHOX2a(2)         =====================MYC_MYB  <-----------GT1 -->AGL2    <---------YAB1----------->ARR10     --------->At4g35610==================================MYC_MYB   aattgggtatctctaagattggacggttgagatcttagaagactaaagtcagtagaatcgacggttgacacgtgaatacgtaagtttgtaactaaccgta  17055200                                --------->At4g35610                                <---------At4g35610                                --------->ZAT18                          --------->ALFIN1                         <-------MYC3                         ------->MYC2                         ------->PIF5                         <-------PIF5                         ------->MYC3                         <-------MYC2                              ----------->RAV1(1)                        <---------ANAC58                          --------->AtMYB61                        <---------ANAC58                      --------->SPL7                        <------NtERF2                        --------->ATERF1(1)                        --------->TGA1a                      <------NtERF2                       ------>NtERF2                        <---------SPL7                      <---------ANAC46                      ------>NtERF2                     <------NtERF2                         --------->DEAR3(1)                     --------->ATERF1(1)                  --------->ATERF1(1)                   <---------RRTF1(3)                     <------NtERF2                   <---------DEAR3(1)                    <---------ORA47(2)                   --------->ALFIN1  --------->ANAC58    ------>NtERF2         <----------DOF2<---------ANAC46                 <---------DEAR3(2)      <---------ARR14(2)         =========================bZIP_DOF               <---------ATERF1(1)     <---------GLK1(2)      --------->ARR11(3)<---------TGA1a                  <---------RAP2.3(1)     --------->ARR14(2)      <---------ARR11(3)--------->ALFIN1                <---------DEAR3(1)   <---------LBD16     --------->GLK1(1)<---------ANAC58                <-----------HVH21 --------->ATHB51     <---------GLK1(1)<---------ANAC58               --------->TGA1a    <---------ICU4   --------->ARR11(3)  <---------YAB1   <---------RAP2.3(3)               --------->O2 <---------ALFIN1       <---------AHL20(1) =================================MYC_MYB            <---------O2--------->MYB46(3) --------->AHL20(2) ->TOE1(3)      <-----------RAV1(1)  --------->ANAC58<---------TGA1a   <---------YAB1 --------->AHL20(2) =================================MYC_MYB   --------->ATHB12<---------ATERF1(1)--------->LBD16  -----   gcatatgatatcttttcaatggtggcgcgtggggagcacaagttattgatttgcctcgtcggcgtccaccaccattatcgccggatttttatatattcac  17055300                                                                                                *TSS                                                               <---------ANAC46        <---------TOE2(3)                                                               <---------ANAC58        <---------TOE1(3)                                                               <---------ANAC58       <-----------GT1          --------->YAB1  ------>MYB83                      <----------DOF2         <---------AHL20(2)    >>>>>>>>>TBF1         ------>MYB46(1)                <---------ARR11(3)      --------->ARR11(3) ---->ANAC46          >>>>>>>>>MYB2                   <----------DOF2            <---------ARR11(3)   gtagaagaagaatgagaagacgaaaaccaacttctacttcttctcagtggctctctctttatctttcttggagtttagttagagattttaacgttgcaaa  17055400                                                                                         <---------TOE1(2)                                                                                        <-----------RAV1(2)                                                                                    --------->ARR11(3)                                               <---------ICU4               --------->HSFB2a(2)                                              <---------YAB1        <<<<<<<<<TBF1   <---------ARR11(3)         <---------ATHB12                <---------At4g35610  <<<<<<<<<TBF1 <---------HSFB2a(2)     --------->MYB46(3)        --------->ARR14(2)       <---------At4g35610<---------LBD16    -------->P                 ------->TEIL <---------At4g35610  <<<<<<<<<TBF1     <---------GLK1(2)   --------->WOX13(1)          <---------ARR14(2)    <---------At4g35610  <---------LBD16<---------TOE2(2) <------ZmHOX2a(2)             --------->GLK1(2)     ------>ZmHOX2a(1) <<<<<<<<<TBF1<-----------ARR10   tggatcaaccaatgaaaccaaaaacttgctctgaatctgattttgctgatgattcctctgcttcttcttcttcttcttcgggacaaaatctcaggtttta  17055500                                                                              <---------------------WRI1                                                                            <---------MYB46(3)                                                                           <---------AtMYB61                                                                           --------->ALFIN1                                                                        --------->ALFIN1               <----------DOF2                                          <---------AtMYB61            <-----------GT1                                      --------->At4g35610       --------->ARR11(3)       --------->ICU4  <---------ANAC46 <---------ZAT2       <---------ARR11(3)       <---------YAB1  <---------ANAC58 <---------At4g35610   ---------->DOF2          <-----------HVH21   <---------ANAC58 --------->ZAT2 <----------DOF2   <---------AtLEC2     --------->YAB1         <------ZmHOX2a(1)                   <-   gtgcttaaagatgttaactttacatggctgtgtcatgtttattcatagtttcgtctaattacagaggagctgagatggtggtggaagtgaagaaggaagc  17055600  Previous    Next  AGI:  At4g36050.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN69587.1); contains InterPro domain Exodeoxyribonuclease III xth; (InterPro:IPR004808); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); contains InterPro domain Zinc finger, GRF-type; (InterPro:IPR010666) Range:  from: 17051985    to: 17055062    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g36060.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G19860.1); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G19860.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48211.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 17055396    to: 17056707    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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