Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <------ZmHOX2a(2)                                                           <---------LBD16                                                          --------->MYB52(1)                                                         <---------ALFIN1                                                        --------->ZAT2                                                     <-------TEIL------>ZmHOX2a(2)                                                    --------->ALFIN1                                                 --------->ALFIN1<---------LBD16                                                 <---------DEAR3(1)                                 -                                                 <---------AtMYB61 --------->LBD16                 --                         ----------->GT1        <------NtERF2  --------->ARR14(2)                 <--                        <---------TOE1(3)      --------->LBD16 <---------ARR14(2)        --------->MYB46(3)                        <---------TOE2(3)    <---------LBD16 --------->LBD16           <---------ARR14(2)                  <---------ANAC46       --------->ZAT14<---------ZAT2                 --------->ARR14(2) ---ANAC46    --------->At4g35610        <---------ZAT14<---------At4g35610      --------->ALFIN1 <-- >STF1     <---------MYB52(1)           --------->ALFIN1--------->At4g35610  <---------LBD16      <--   agaaatcgagaccattagctccgtttaaggtgaattcagcgagtgtagccggaggtgcagcaccggatccggagcattctacggtggaagaaccacagtc  17040700                                       --------->ZAT14                                       --------->ZAT18                             <---------ANAC58                             <---------ANAC46                             <---------ANAC58                             --------->ANAC55(2)                             <---------ANAC55(1)                         <---------ANAC58                         <---------ANAC58                         <-------GAMYB <---------At4g35610                        --------->MYB52(2)                                    --------->LBD16                        --------->MYB55(2)                               --------->At4g35610                        <---------MYB46(3)                               --------->ZAT2                        --------->ABI4(2)                                <---------At4g35610                       <---------AtMYB61                                 <---------ZAT2  --------->ALFIN1     --------->ALFIN1<---------ZAT14                  ------>MYB46(1) <-----------HVH21    <---------MYB52(1)    <---------------AtSPL3      ------>MYB83<---------LBD16 -------->LBD16      --------->LBD16   --------->At4g35610        ----------->HVH21 ------>ZmHOX2a(2) ------->LBD16------->TEIL<--------P<---------ANAC46              <---------SPL7  --------->ARR14(2) ----NtERF2   <---------ARR14(2)    <---------ANAC58      <---------ARR14(2) <---------ANAC46 ---------RAV1(2)  <---------LBD16  <---------ANAC58      --------->ARR14(2)<---------LBD16 -------LBD16 --------->ARR14(2)<---------ANAC46--------->SPL7 --------->MYB52(1) <---------ARR14(2)   cccggtgatgcaagtgaatcttccggtggttgcgtcttgtgtgcagagagtacgaccccaaatacgaccggaccaagctgcggggatcgggataactcgt  17040800                                                      <------NtERF2                                                     --------->LBD16                                                    <---------ANAC46                                                    --------->DEAR3(1)                                                   --------->RAP2.3(1)                                                   --------->ATERF1(1)                                                   <------NtERF2                                                   <---------LBD16                                                  <---------RAP2.6(1)                                                  <---------ERF1                                                  <---------RRTF1(1)                                                  <---------RAP2.3(1)                                                  <---------ATERF1(1)                                                  ------>NtERF2                                                 --------->DEAR3(1)                                  --------->DAG2 <---------DEAR3(1)                            <--------P          --------->RAP2.6(1)                          <---------REM1(1)     --------->RRTF1(1)                          <---------MYB46(3)    --------->ERF1                  --------->At4g35610                          --------->MYB55(2)    --------->ATERF1(1)             <---------At4g35610                        <-------GAMYB          ------>NtERF2                <---------REM1(1)                        <---------MYB52(1)     <---------RAP2.3(1)          --------->ALFIN1                       --------->LBD16         --------->LBD16           <---------DEAR3(1)                   <---------ARR14(2)          <---------ATERF1(1)     --------->MYB52(1)    <-------                   --------->GLK1(2)          <---------RAP2.3(2)     ----------->HVH21      <-------             <---------TOE2(3)<------MYB83 --------->GLK1(2)          <---------SPL7        ---------             <---------TOE1(3)<------MYB46(1)<---------LBD16      --------->ANAC46  <---------ALFIN1      <------MYB46(1)<---------LBD16       <---------ARR14(2)     --------->ANAC58 <---------ZAT14      <------MYB83 --------->ARR14(2)      --------->ARR14(2)     --------->ANAC58 --------->ZAT14    <--------P <------ZmHOX2a(1) ---------->DOF2--------->RAP2.3(1)  <-----------RAV1(2)    <--------   gtctcggtagggtttaaggagaatccggttgtaggtaaaggagaggttccggcgccggagagaagtccaggccagacggtgtagctacactggttaacga  17040900         --------->ALFIN1         <---------ANAC46                                                       <---------At4g35610      --------->ALFIN1                                                          <---------ZAT14  ---------->DOF2                                                               --------->ZAT14 --TOE1(3)                                                                   ---------->DOF2 --TOE2(3)     --------->ARR14(2)                                       --------------->AGL15   ----- >MYB52(1)     <---------ARR14(2)                ---------->DOF2     <---------WRKY18(1)       <----- -DOF5.7(2)   <------ZmHOX2a(1)               >>>>>>>>>TBF1        <---------WOX13(1)      --------->At4g35610   tggtgaaagtggtggaggaaactccatagatgaaaacaagaattagaagaagaaagagagaaacttgagattgacccattagagcagagagtcaccagaa  17041000                                   --------->At4g35610                                   <---------At4g35610                                 <------NtERF2                                --------->LBD16                               --------->DEAR3(1)                              --------->ATERF1(1)                              <---------LBD16                              <------NtERF2          ------->TEIL       ------>NtERF2<---------ZAT14     --------->CCA1(2)       <---------RAP2.3(1)              <---------At4g35610    --------->AHL20(1)      <---------DEAR3(1)   --------->WRKY38(1)   --------->AHL20(2)     <-----------HVH21      ----------->HVH21 ---->GLK1(2)            <-----------RAV1(1)    <---------MYB52(1)          ----------->GT1 ----GLK1(2)<----------DOF2 --------->ETT(2) <---------LBD16  --------->At4g35610---------->DOF2   tctaaatatatgaacttttgtgtttttatgtcgccggagatgagtttaccggtgactctgtttctgctctcgagagaaatgtataaagagtgcaaatgtg  17041100                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                          --------->HSFB2a(2)                                                                                     <---------CCA1(1)                                                                       ---------->DOF2    <---------HSFB2a(2)                                                                ------->TEIL         <---------RVE1(1)                          --------->ARR11(3)               <-------GAMYB            --------->ARR11(3)               ----------->GT1                            <------MYB83 ==============================          --------->AHL20(2)     <---------ANAC58         <---------MYB46(3)        <---------ARR11(3)          <---------AHL20(2)     <---------ANAC58         <------MYB46(1)    <---------ANAC58     --- <---------ANAC58     ---------->DOF2                     ----------->GT1    <---------ANAC46-------- <---------ANAC58   <---------YAB1          *TSS         <---------AtMYB61   <---------ANAC58========   aaggcgttgtatttatatggtaatgaaagaaattggagtgagagagagaggtttaggggatggttgaatcttttaaagggcttggagattttttagaaag  17041200        ------->MYC3        <-----------HVH21       --------->O2       <---------ANAC55(2)       <---------TGA1a       ============================bZIP_DOF       --------->ANAC55(2)       --------->ANAC46                                                       <---------AHL20(2)       --------->TGA1a                                                       <---------YAB1       <---------O2                                                       <---------YAB1   ==============bZIP_DOF                                                <---------AHL20(2)   <----------DOF2                                                       <---------AHL20(1)   <-----------HVH21                                                   <---------YAB1 --------->At4g35610    <----------DOF2                              --------->YAB1 <------NtERF2        <------NtERF2                            --------->ANAC46 ---------DEAR3(2)   ------>NtERF2                             --------->ANAC58 --------RAP2.6(2)   <---------RAP2.6(3)                       --------->ANAC55(2) --------DEAR3(1)   --------->RAP2.6(2)            <---------ANAC58  <---------ICU4 ================bZIP_DOF                          <---------ANAC58 --------->ICU4 ------>RAP2.6(3)--------->ANAC46                  <---------ANAC46 <---------YAB1       <---------AHL20(2) -->DOF2<-------MYC3--------->DEAR3(1)    ------------>CBF     --------->ANAC58          --------->AHL20(2) ================bZIP_DOF                <------NtERF2        <---------TOE1(3)   --------->YAB1   gtcggcttcacgtgagcccatgccgcctttgtctaagttagtcggccaatgtgtcgttcatgttcacgttattattatttttaatgagcatttatatgta  17041300                                                                                               ------                                                                                           ------->MYC3                                                                <---------ANAC58           <-------MYC3                              <---------AHL20(2)                <---------ANAC46        <---------ANAC46                            <---------YAB1                      <---------ANAC58        <---------ANAC58                         <---------AHL20(2)                 --------->ATHB12            <---------ANAC58               --------->YAB1--------->YAB1                <---------YAB1           <---------ANAC58       <----------DOF2   <---------YAB1           <---------AHL20(2)                <---------ANAC58   gaaacatttcttttgaatcatagaaatattattatatcatgttcttaattgtttattttgtatgattcgtgcaatatgacaatatgggttgcatatggat  17041400                                                            --------->AHL20(1)                                                            <---------AHL20(1)                      ===========================HOX2a_HOX2a<---------AHL20(2)                      ------>ZmHOX2a(2)                     --------->ARR11(3)                    --------->ARR11(3)                   --------->AHL20(2)                    <---------ARR11(3)            <---------ANAC58     <------ZmHOX2a(2)               <---------DREB2C(2)                <---------ANAC58    <---------ARR14(2)               <---------DEAR3(1)            <----------DOF2--------->AHL20(2)         ---------->ID1               <---------DEAR4(1)         ------>ZmHOX2a(1) <---------ARR11(3)     <---------MYB52(1)               <---------At1g77200        ====================================HOX2a_HOX2a            <-----------RAV1(1)      ---------->ID1     <---------AHL20(2) <---------MYB52(1) --->ARR11(3) --------->DDF1   --------->ARR11(3) <---------ANAC46    --------->ARR14(2)       <-----   attgatcagtcttgatgtcggtgatctaaaatagaacttgtctcctcctttggcttaaataatatattagacgatccattacttcgtttgtagttttctt  17041500                                                      --------->MYB52(1)                                         <----------DOF2           <-----------GT1                                    --------->MYB52(2)---------->DOF2    --------->AHL20(2)                                <---------MYB46(3)  <---------MYB52(2)--------------->AGL15         ---------->DOF2   <---------AHL20(2)     --------->ZAT6   --------->YAB1                   - <----------DOF2      ----------->GT1  <---------MYB46(3)         --------->MYB46(3)               -- -----DOF2    --------->At4g35610 <--------P     <------ZmHOX2a(2)<---------ATHB12                 <-   tttctttaagtaaaagagcagagcgagaaaaaattggttagtggtttatcgatcactaacgcagactaatcaccataaaatggaaatgtattgaaggaaa  17041600  Previous    Next  AGI:  At4g36010.1    Description:  pathogenesis-related thaumatin family protein. similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT2G17860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59783.1); contains InterPro domain Thaumatin, pathogenesis-related (InterPro:IPR001938) Range:  from: 17039195    to: 17041144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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