Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------AHL20(2)                        <---------ICU4                        -------->ATHB1                        <---------AHL20(2)                        --------->AHL20(2)                        --------->ATHB12                        <--------HAHB4                        --------->ATHB51               <---------------AtSPL8               --------------->AtSPL8               --------------->AtSPL3                                                           -----         <---------------AGL15     --------->AHL20(2)                                     --------->AHL20(2)         --------------->AGL15     <---------AHL20(2)                                     <---------AHL20(2)      <-----------GT1  --------->ICU4   --------->YAB1                                    --------->YAB1   <---------CCA1(2)   <---------ATHB51<---------AHL20(2)       --------->AHL20(2)  ----------->GT1 -   atctcatatcactctatgaagtacaattatttgaaaattaaataatagagttttagatgtcaaaaaaaaaatcaatagagtttttagagtaattaaaact  17034700                                                    ------>MYB83                                                    ------>MYB46(1)                                                  <---------MYB111(1)                                              --------->ZAT18                                              <---------ZAT18                                              --------->ZAT14                                              <---------ZAT14                     --------->ARR11(3)--------->AHL20(2)                 <---------AHL20(2)                     <---------ARR11(3)--------->AHL20(1)              <---------ARR11(3)          <---------YAB1     --------->ARR11(3)  --------->ANAC58      --------->ARR11(3)      <---------ANAC55(2)    <---------ARR11(3)  --------->ANAC58    <---------TOE2(3)         <----- ------>GT1     <---------TOE2(3)      <---------AHL20(2)    ----------->GT1          <-------TEIL -------->AHL20(2)   --------->GLK1(2)--------->AHL20(2) ---------->DOF2 --------->AHL20(2)<---------   gtataaataagtaagattaagaaaatctatagattttaaaaaaaattgtgcaccaaatctaaagagtgaataagatttatttctaacatacagcttttat  17034800                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                   <---------AHL20(2)            <---                                                                   --------->AHL20(1)            ----                                                                   <---------AHL20(1)           <----                                                           --------->AHL20(2)                  ------             --------->At4g35610                         <----------DOF2                     --------             <---------At4g35610         <---------bZIP60(1)       --------->AHL20(2)------>ZmHOX2a(1) ----------->HVH21 <----------DOF2       --------->bZIP60(1)      --------->AHL20(2) ================ ------GT1<---------YAB1           <---------MYB52(1)    --------------->AGL15       ------------>CBF -DOF2  --------->YAB1      ---------->DOF2         <-----------HVH21  <-----------GT1    --------->YAB1   cccttgacaattgtcatttgacttttgagttatagcagttgtgttgtcatcttgtgtcacttttaatattaaattacaaaacaagtcctcaattttaaaa  17034900                                                                     <----------DOF2                                                                   ------->TEIL     --------->TOE2(3)                                       <-----------GT1  <-----------GT1                           <---------At4g35610  <---------ZAT14 -------ICU4                                --------->At4g35610  --------->ZAT14 ------ATHB51                     <---------ZAT18         <---------ICU4 ----->ICU4                       --------->ZAT14    <---------AHL20(2) ------AHL20(2)                 --------------->AtSPL3<---------AHL20(2) ----->AHL20(2)               <-----------GT1 ----------->HVH21--------------->AtSPL8 --------->DAG2 -----AHL20(1)      --------->GLK1(2) <----------DOF2<---------AHL20(1)              ---------->DOF2 --->YAB1          <---------GLK1(2)------->TEIL------------>CBF <---------ZAT18 --------->LBD16 ->AHL20(2)    <------ZmHOX2a(2)--------------->AtSPL8--------->AHL20(2)    <---------WRKY18(1)     - =====================HOX2a_HOX2a <---------ZAT14    --------->AHL20(2)    ----------->HVH21  -------   taattaacatcagtgagatcagaatctaaatgttactgtactttacagttgacaatttaattttcactgtactttgtttgacccccaaaaagtactgtgt  17035000                                                                                                    -                                                                                                 <---                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                             --------                                                                                             ------>NtERF2                                                                                            <--------                                ---------->DOF2                                             <--------                              --------->LBD16                                               <--------                              --------->HSFB2a(2)                                          <---------LBD16                              ------>NtERF2                                              --------->GLK1(2)                              <---------HSFB2a(2)                                        --------->ARR14(2)                             <---------LBD16                                             <---------ARR14(2)   ----------->GT1  ---------->DOF2       --------->YAB1                                <---------GLK1(2)  --------->DAG2------>MYB46(1)<------NtERF2   --------->At4g35610                      --------->ARR14(2) --------->DOF2 ------>MYB83<---------LBD16<-----------TGA1      --------->ZAT14        <---------ARR14(2) ---->GT1     <---------MYB59--------->LBD16   <---------At4g35610                     <---------At4g35610   taaaaaggcaaaaaaaccaaactaaagttcgccgggaagcgaaatcgtcatcttccctgttttgctgtttagtctgcaagagaaatttcagattccggcg  17035100                                                                                              <------                                                                                          ===========                                                                                          ===========                                                                                          ------>ZmHOX2a(2)                                                                                         ============                                                                                         ============                                                                                         <------ZmHOX2a(2)                                                                                         --------->CCA1(2)                                                                                        --------->AGP1                            <---------ALFIN1                                            <---------AGP1 --------->DOF2           ------>ZmHOX2a(2)                                             --------->ARR11(3) ---NtERF2                =========================HOX2a_HOX2a                          <---------ARR11(3) ---->LBD16              --------->PCF2                      --------->HSFC1(2)         --------->ARR14(2) ----DEAR3(1)            ==========================HOX2a_HOX2a                          <---------ARR14(2) ----ANAC46              <------ZmHOX2a(2)                   --------->HSFB2a(1)       <---------CCA1(2) ---LBD16               <---------ARR14(2)     <---------At4g35610                    ----------->ARR10 ->LBD16  <---------YAB1------->TEIL        <---------At4g35610     --------->ANAC46--------->LBD16 -LBD16 --------->YAB1  --------->ARR14(2)  ------>ZmHOX2a(1)<---------HSFC1(2)    <---------ANAC46 -RAP2.6(2)      ------------>CBF     <<<<<<<<<TBF1          <---------HSFB2a(1)  <---------LBD16 -RAP2.3(2) <---------GLK1(2)      <<<<<<<<<TBF1         ----------->GT1      <----------DOF2 <------   gagaaagctataacgattcttcaatggatcccacttcttcttcttcctctgctcttagatggaaaattcttcgccaagcgcttctccgtagatctggttg  17035200                                                                                      --------->GLK1(2)                            <---------ALFIN1                                         <---------GLK1(2)                  ------>ZmHOX2a(1)                                                  --------->ARR14(2) ---WOX13(1)------>ZmHOX2a(1)                                                      ----------->ARR10 ==================HOX2a_HOX2a <---------DAG2                        <----------DOF2 <---------ARR14(2) ========================HOX2a_HOX2a                            ========================HOX2a_HOX2a ==================HOX2a_HOX2a <----------DOF2                  <------ZmHOX2a(2)------>ZmHOX2a(1) ========================HOX2a_HOX2a                 <---------CCA1(2)          --------->TOE2(3) --P  <---------ALFIN1------>ZmHOX2a(1)  <-----------GT1  --------->MYB52(1) <-----------GT1  -------   atactcccctactccttctccttcctgcatccacttttcgatttcacacattcgcatagctaatggatcatctttcaattttcctcagattctcaatctc  17035300                    --------->ANAC58                    --------->ANAC58               <---------GLK1(1)         ------>MYB83                                           <---------ZAT18         ------>MYB46(1) --------->ANAC58                       --------->ZAT18         --------->MYB52(1)                                 --------->ALFIN1        --------->MYB55(1)                                <---------O2                      ---------       <---------MYB59 ---------->DOF2                <-----------HVH21                     <--------       --------->AtMYB61 --------->ANAC58          <---------ANAC58         ------>ZmHOX2a(1) -->TOE2(3)    --------->GLK1(1)                   <---------ANAC58        --------->TOE2(3)<--------   aaactgagaccaaacggatttcaaggaaagcaactcaaggattcaacttgattccttgtcaagtggtggactcttctcctcaatcggataagtctcgtga  17035400                                                                 ------>ZmHOX2a(2)                                                                <---------At4g35610                                                                --------->At4g35610                                                         --------->ARR11(3)                                                        ================HOX2a_HOX2a                                                        <------ZmHOX2a(1)                      <-----------HVH21             <---------MYB52(1)                     --------->ANAC46              --------->TOE2(3)              <---------ALFIN1                     --------->TOE1(3) >O2   --------->MYB52(2)                        <---------TOE1(3) -ANAC46    <---------ALFIN1                     <---------TOE2(3) -O2 <---------MYB52(1)<---------ATHB12         --------->MYB52(1)                             <-----   agcatccgtttgctacacacttcccatcactggctctcccaaactctatctaacgttaggattttgatctgaagttttcatcaaatgaaacaatgttatg  17035500                                                                                          --------->ARR11(3)                                                                                         <---------CCA1(1)                                                                                         <---------GLK1(1)                                                                                        --------->ARR11(3)                          --------->ARR11(3)                                            <---------ARR11(3)                      ------>ZmHOX2a(1)                                              <---------HSFB2a(2)                <---------ALFIN1                                              <---------ATHB12             <-----------GT1             --------->CCA1(2)               ------>ZmHOX2a(2)<---------ARR11(3)          --------->ARR11(1)           --------->AHL20(2)              <---------ARR11(3)--------->GLK1(1)          <---------GLK1(2)        --------->AHL20(2)    ----------->GT1--------->At4g35610        ----------->ARR10 <---------ARR11(3)         --------->DAG2    --------->ARR11(3)<---------RVE1(1) ----YAB1 --------->ARR14(2)    <----------DOF2   ---------->DOF2    <---------ZAT6  --------->HSFB2a(2)   ttttgttcgatagatttgccactcctaagagcttctttaaaatatatgcagacaaagagtggataattgtagtgatctcaatgacttcgagatatctaat  17035600  Previous    Next  AGI:  At4g35987.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93108.1) Range:  from: 17035124    to: 17035784    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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