Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------DAG2                                                                                         ------->TEIL                                                                               ------>MYB46(1)                                --------------->AGL15                         --------->MYB52(1)                                <---------------AGL15                        --------->AtMYB61                          <---------REM1(1)                            --------->REM1(1)<---------ALFIN1               <---------ANAC58<---------ANAC58                  --------->MYB46(3)----------->HVH21        <---------YAB1    <-----------RAV1(1)                   ------>MYB83 --------->MYB46(3)    <---------WOX13(1)    --------->ALFIN1                      ------>MYB46(1)------>MYB83<---------  --------->ATHB12     --------->DAG2                          ----------->RAV1(1)<-----------HVH21  <--------ATHB1     ---------->DOF2                           --------->MYB52(1)------->GAMYB      - <---------YAB1<---------ANAC46<---------ANAC46--------->At4g35610 <---------At4g35610--------->ANAC58 --------->ICU4<---------ANAC58<---------ANAC58<---------At4g35610 --------->At4g35610--------->ANAC58 --------->ATHB5 --------->ALFIN1         <---------GLK1(1)<-----------GT1  --------->MYB46(3)    ---   agaatgattgatgaataccgtgggaaaggtgttgctggtataagaaatcagcaaacaggttttaccaacagctccatcaccaacggtgacgcactttatg  17025500                                                                                --------->TOE1(3)                                                                                --------->TOE2(3)                                                                              -------->P                                                                              ------->TEIL          -                                                                           <------ZmHOX2a(2)        -                                                                           ========================== -DOF2<---------ZAT18         <<<<<<<<<TBF1                               --------->ARR11(3)      <-- -------->TOE2(3)          <<<<<<<<<TBF1                <-----------GT1   <---------ARR11(3)--------- ---->TEIL              <<<<<<<<<TBF1            <-----------GT1    ---------->DOF2     <---------AHL20(2)   aaccttgatgcgctcattgcctcttcttcttcttcttcgagccaaaatatgtcacaatttaccaaaaaacaaaagagatcaacctcagatttaaacctga  17025600                                       <---------HSFC1(2)             --------->ANAC46          --------->HSFB2a(1)       ------->GAMYB            --------->MYB46(3)        --------->ARR14(2)        --------->MYB46(3)           --------->ANAC58         --------->LBD16   <----------DOF2 -------->ANAC58                   --------->ANAC46 <---------YAB1 -------->ANAC58                 ------>ZmHOX2a(1) --------->ARR11(3)                         ------- ====HOX2a_HOX2a       --------->ANAC58--------->HSFC1(2)     <-----------GT1     --------->CCA1(2) ----ZmHOX2a(1)        --------->ANAC58<---------HSFB2a(1)--------->WOX13(1)     <---------ARR11(3) -->RAV1(2)--------->ANAC58  --------->ARR14(2)    <---------ARR11(3)            --------->ARR14(2)<-   ggaagccagaaacacccacaatgtgaagccaattcctccgaaacttcgaccattatctttcaattaaccatctcaaaaccctagatatgtataatgtgga  17025700               ----------->GT1        <---------------AGL15        --------------->AGL15                                                               <xxxxxxxx       ----------------->AGL3                                          <------ZmHOX2a(1)  <---------ANAC58       --------->LBD16                                           --------->TGA1a          <---------ANAC58       ----------------->AGL2                              --------->DAG2              --------->ARR14(2)     --------->ANAC46                                    ==================bZIP_DOF    <---------ARR14(2) ---->GT1    ----------->GT1                             ---------->DOF2<---------------------WRI1 --------MYB52(2)     --------->YAB1         --------->At4g35610 <---------TGA1a      <------ZmHOX2a(1)   aacaaaccccccaaatagagaaaatcagaaatgtgaagaaggaaggaagatgaataaacaaaagggaacgtgaggacgatgaattggaggatgcgagaga  17025800                                                             <---------WOX13(1)                                                           -------->HAHB4                                                           --------->ATHB51                                                           <---------ICU4                                                           <--------ATHB1                                                           --------->ATHB12                                                          <---------AHL20(2)                                                          <---------ATHB51                                                          --------->ICU4                                                      <------NtERF2                                                     ----------->GT1                                                     <------NtERF2*TSS                                                     --------->LBD16                                                    --------->RAP2.6(2)  <---------ANAC58          --                          ---------->DOF2          <---------LBD16<------------CBF              <----         --------->MYB46(3)                        <---------ANAC46      <---------ANAC58    -------- xxxxxxxxsmallRNA(s)  ---------->DOF2    ---------->DOF2  --------->AHL20(2)            --------->ANAC46   gagagagaacaacaactagagagagaaagaaagaagtagagaagaaagtgatggccggaaataattgccattgaagcgttcgattaatctcagccattca  17025900                                                           <-----------GT1                                                          --------->ICU4                                                        <---------ICU4                                                        --------->YAB1                                                       --------->ICU4                                                       <---------ATHB51                                                       --------->AHL20(2) ------>MYB83                                      --------->AHL20(2) ------>MYB46(1)          <----------DOF2  <---------MYB52(1)                  <----------DOF2 ------->AtMYB61          <---------DAG2  <-------GAMYB<---------AHL20(2) <<<<<<<<<TBF1 -------GT1            <-----------GT1   <-----------RAV1(1) <---------YAB1  <----------------------- ->AtLEC2    ------------>CBF   <-----------GT1 <----------DOF2    <-----------GT1 <-----------GT1   accttccgactgttttgcaatctttttactttttttacttcttctgttgtcttttaaataattactattttacttcttcttcttttttctgtttgatttt  17026000                   <---------AHL20(2)                   --------->AHL20(2)                  --------->AHL20(2)                  <---------AHL20(2)                  <---------AHL20(1)                  --------->AHL20(1)               <---------AHL20(2)               --------->AHL20(2)              --------->AHL20(1)              --------->AHL20(2)              <---------AHL20(2)                ---------->DOF2              <---------AHL20(1)        ----------->GT1    --------->ARR14(2)                 --------->DAG2    <---------ARR14(2)  --------->ARR11(3)      --------->MYB52(1)  ------->TEIL---------->ID1 -ANAC81     --------->AHL20(2)       ---------->DOF2       --------->ANAC46<----------DOF2   ttagtgtatattcaaattaatttatttatcttgtatacaaaaaagtaaaataaaggagttgcacataatgtattttgtctttgttgtttaaaatgcaaat  17026100                                      ------->GAMYB                                   <-----------GT1                                  <-----------GT1                          <---------ANAC58                          <---------ANAC58                          <---------ANAC55(2)        --------->HSFB2a(2)                          --------->ANAC55(2)        <---------HSFB2a(2)                 <-----------GT1                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        <---------AHL20(2)  <         --------->ZAT6   <---------ANAC55(1)        <---------------AtSPL3 <---------YAB1        <--       <<<<<<<<<<<<<<<<<LFY xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      <---------YAB1 --------->AHL20(2)       <-----------GT1  <-----------GT1   ----------->GT1           <-----------GT1  <---------AHL20(2)   aagaaaaattaacactggctaaaattatacgtgtttttaactgtctgtaaaatttctagtacgatttgttttactattctaattcatttttttactagtt  17026200              ------>MYB46(1)      <---------At4g35610      --------->At4g35610                                                <---------SPL7    <---------GLK1(2)                                                  <---------------AtSPL8    --------->ARR14(2)   --------->GLK1(2)                             --------------->AtSPL3    <---------ARR14(2)   <---------ARR11(3)                     ----------------->AGL1     --------->ZAT18  --------->LBD16        --------->ARR11(3)                 <---------ATHB12               <---------ZAT18 --------->HSFB2a(2)    --------->CCA1(1)                  ------>MYB83--------------->AtSPL8 <---------HSFB2a(2)    --------->RVE1(1)                  ------>MYB46(1)       --------->DAG2 ---------LBD16 ----------->GT1      --------->ICU4       --------->WOX13(1)    ---------->DOF2   <-- ---------GT1 ------>MYB83           <---------YAB1<---------YAB1     <---------LBD16    <xxxxxxxxxxx   tttccggatgctcaccaaatgtgaaaaaatctctaagttatgattcaatatttatgaaaccaatcagccaattgcggtacaataaagttgtaatgcacta  17026300                                                                 --------->At4g35610                                                                 <-------GAMYB                                                                --------->MYB46(2)                                                                <---------MYB46(3)            --------->ANAC58                                    --------->MYB52(2)            --------->ANAC58                                  <--------P                          <--            --------->ANAC46        <---------TOE2(3)       <---------MYB46(3)         <---------ZAT6     --------->LBD16       --------->AHL20(2)               ----------->GT1        <---------ANAC58    <---------ANAC46   <---------YAB1            --------->ARR11(3)        <---------AtLEC2     <----   <---------LBD16    <---------TOE2(3)          <---------ARR11(3)        <---------ANAC58    ------ -------ARR11(3)    <---------AHL20(2)          --------->YAB1<---------MYB52(1)   <---------ANAC58 xxxxxxxxxxxsmallRNA(si3)<<<<<<<<<MYB98        <---------YAB1<-------GAMYB <---------ANAC58 ---------   gttcttccgcatactcgccaaatttatgttaaaatttcaaggatgtttgatgatattgaatgtggttagttgaatttgcatgttggctagtgagaatgtg  17026400  Previous    Next  AGI:  At4g35950.1    Description:  ARAC6/ATROP5/RAC2 (RHO-RELATED PROTEIN FROM PLANTS 7); GTP binding. Identical to Rac-like GTP-binding protein ARAC6 precursor (ARAC6) [Arabidopsis Thaliana] (GB:Q9SBJ6;GB:O65632); similar to ARAC1/ATGP2/ATRAC1/AtROP3/RAC1/ROP3 (Rho-related protein from plants 3) [Arabidopsis thaliana] (TAIR:AT2G17800.2); similar to ARAC1/ATGP2/ATRAC1/AtROP3/RAC1/ROP3 (Rho-related protein from plants 3), GTP binding [Arabidopsis thaliana] (TAIR:AT2G17800.1); similar to putative ROP family GTPase [Brassica napus] (GB:AAO11654.1); similar to Rac-like GTP-binding protein RHO1 precursor (RHO1Bv) (GB:Q39435); contains InterPro domain Ras GTPase; (InterPro:IPR00180 Range:  from: 17023840    to: 17025866    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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