Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ARR14(2)                       --------->ANAC58                       --------->ANAC58                   <---------HSFB2a(2)                                                       ------>ZmHOX2a(2)                   <---------HSFC1(1)                                                       <------ZmHOX2a(2)                   --------->HSFB2a(2)                                                     <---------ARR11(3)               <---------ARR14(2)                                                          --------->ARR14(2)    <<<<<<<<<<<<<<<<<LFY    <---------ARR14(2)                   ----------->GT1           <---------ARR14(2) -----YAB1     --------->ARR14(2)       --------->GLK1(1) <-----------RAV1(2)              --------->ARR11(3)   tatagtctacaatggcaaattcgagaagcaaattcgaaacagagttccatccattagagaacaggggatgttatttcatcccaaactcaaaccgatctta  16989800                                               <---------AHL20(2)                                               --------->AHL20(2)                                              <---------WOX13(1)                                       --------->ATHB12                                       --------->ATHB51                                       --------->AHL20(2)                   --------->AHL20(2)                                       <---------AHL20(2)              <---------YAB1               <---------AHL20(2)     <---------AHL20(1)            --------->GLK1(2)         <---------ANAC55(2)          --------->AHL20(2)        <------ZmHOX2a(1)         <---------ANAC46             <---------AHL20(2)      <---------TOE2(3)         <---------ANAC58      --------->TOE2(3)          <---------------AGL15       --------->CCA1(2)         <---------ANAC58      --------->TOE1(3)          <----------DOF2   <---------AHL20(2)      -         --------->ANAC55(2)<-----------GT1<---------AHL20(2) <---------TOE1(3)    ------->TEIL  <---   gttatgttatttcgtatttttttgggtattttaccttcaaattatttgattaatttcatgctttaaggagaatttgattaaaatgaatatacaagagtta  16989900                                                         <---------TOE2(3)                                                       <---------ICU4                                                       -------->HAHB4                                    --------->AHL20(2) --------->YAB1                                    --------->ICU4    --------->ICU4                               --------->ANAC58  <---------ANAC55(2)        <---------AHL20(2)     --------->ANAC58  --------->ANAC55(2)        --------->AHL20(1)     --------->ANAC46  ----------->GT1        <---------AHL20(1)     <---------ANAC55(2)    <---------YAB1       --------->AHL20(2)      --------->ANAC55(2) <---------AHL20(2)   <---------YAB1            --------->YAB1   --------->ARR14(2) ------>TEIL                <---------ATHB12  --------->GLK1(2)---------->DOF2               -------- ------YAB1               <---------ICU4      <---------ARR14(2)                  --------->YAB1    <   tgaatttgattatattctcttattctactaatcacgaaatatttagagaatatgtaattatcgtttaaagaactatcgttttattcataaaaactctgta  16990000                                   <---------AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                           <---------AHL20(2)                               --------->TOE1(3)                           --------->AHL20(2)                               --------->TOE2(3)                          <---------AHL20(1)  ----------->GT1    <---------ANAC58            --------                          <---------AHL20(2)  <---------ZAT6     <---------ANAC58            <------- --->GT1                  --------->AHL20(2)  <---------ANAC46   <---------ANAC46---------->DOF2 -----------GT1       --------->YAB1 <---------AHL20(2) <---------MYB52(1)  --------->YAB1  ---------   aattaccaatttgatatacttctatcaaattatttatattttttagttgtgttaattcgttttttttgggtgtatttatcttaaaaagatgggattaaat  16990100                               <-------TEIL        <---------TOE1(3)     --------->CCA1(2)        <---------TOE2(3)     --------->GLK1(2)  --------->ATHB12  <----------DOF2                <---------ANAC58 --------->ICU4  --------->GLK1(2)                 <---------ANAC46 <---------YAB1  --------->ARR11(3)    --------->LBD16                    <---------DAG2 ->AHL20(2)      <---------ARR11(3)--------->ARR14(2)         <----------DOF2     <----------DOF2 --AHL20(2)     <---------GLK1(2)  <---------ARR14(2)      ------>ZmHOX2a(1)*TSS  <---------DAG2 >AHL20(2)<------ZmHOX2a(1)  --------->ARR11(1)    <---------ANAC58    <-----------GT1     --------->YAB1   ttcatgatttaaggagaagaatcttttgagagattcgaaaccgcgatagcattccttgttcctccttttctatttacctttctacttttgccatcatctt  16990200                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                   <------NtERF2                                        --------->HSFB2a(1)                         --------->TOE2(3)                                              --------->HSFC1(2)               ---------->DOF2   --------->RAP2.3(3)                                    <---------HSFB2a(1)             --------->LBD16---------->DOF2    ------>ZmHOX2a(1)            ------->TEIL<---------HSFC1(2)  <---------ARR14(2)     --------->TOE1(3)   ----------->RAV1(2)           <---------GLK1(2)     ----  --------->ARR14(2)    --------->ZAT6 <<<<<<<<<CBP60g                     <---------CCA1(2)     <---  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <<<<<<<<<SARD1                    ------>ZmHOX2a(1)     ------   cgtcgatctacttcccccaaagtctaaccctaaagcccccaaatttctcctgatcaaaaccttgttgtataaatcctgaatctctgaagaaacttcgaag  16990300        <---------------AGL15        --------------->AGL15       <-----------------AGL1                                   <------NtERF2       <-----------------AG                                 ------>NtERF2       <-----------------AGL2                       <---------At4g35610    <---------GLK1(1)                               ----------->RAV1(2) ------>CCA1(2)                                     --------->ZAT2 ------ARR11(3)                                     <---------ZAT2 ----->ARR11(3)                                     --------->At4g35610 ----->ARR11(1) <-------GAMYB        --------->ANAC58      --------->bZIP60(1) ----->ARR14(2)<------MYB83 <---------HSFB2a(2)   --------->MYB46(3)     <---------YAB1 ------ARR14(2)<------MYB46(1)       --------->ANAC58      <---------bZIP60(1) ----->ARR10  --------->MYB59      ------->TEIL<-----------GT1 ------>NtERF2  --------->YAB1   atttgggtttctcaatttggttgagaaattcgcgatgaatcgcaatttttcaccagctgcgatgccaccgatttcatcaatgacaatagataattcattc  16990400                                                   ----------->RAV1(1)                                               --------->ANAC58                                            <---------SPL7                                        <---------ANAC58                                        <---------ANAC58                         --------->TOE1(3) <------MYB83                 <---------ARR11(3)                         --------->TOE2(3)<---------------AtSPL3        --------->ARR11(3)                  ------>NtERF2      <---------GLK1(2)       <---------ARR14(2)                 --------->DEAR3(1) <---------At4g35610      --------->GLK1(2)  <---------MYB46(3)               --------->LBD16    <-----------RAV1(2)        <---------ARR11(3) --------->ATHB12  <--               ------>NtERF2 <---------GLK1(1) --------->ANAC58  --------->At4g35610          <------             <---------LBD16 --------->GLK1(1)--------->SPL7 <-----------ARR10<-----------HVH21   <--     ------>ZmHOX2a(1)  ----------->RAV1(2)<------MYB46(1)   --------->ARR14(2)--------->WRKY18(1)<--  ------>ZmHOX2a(1)    -------->P =============================RAV     --------->RVE1(1)     <-------   tctcctcctccatcttccggcgacttacctgaaatcccagatgcttggtacggcaacattcagtatctgcttaatatctcggtcattggtctcttatgct  16990500                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                -----                                   --------->AtMYB61                                            <----                                   <---------ALFIN1                                             -----                                  --------->MYB46(3)                                            <----                                  <---------ABI4(2)                                             -----                               --------->DEAR3(1)                                               <----                               --------->MYB46(3)                                          --------->ANAC58                              <---------At4g35610                                          --------->ANAC58                              <------NtERF2                                         <---------MYB52(1)                              --------->At4g35610                                  <---------SPL7----                          --------->ANAC46                                     --------->ANAC46 <<<<<                          --------->ANAC58                                   <---------ALFIN1   <<<<<        <----------DOF2   --------->ANAC58             ------>ZmHOX2a(1) <---------At4g35610    <<<<< -------ANAC58          --------->CCA1(2)      ----------->RAV1(2)  <---------HSFB2a(2)  ============ ---At4g35610         <---------At4g35610 <---------SPL7            --------------------->WRI1  ----- -------ANAC46       --------->ANAC58    <---------ANAC46           --------->HSFB2a(2)  ---------->DOF2 -------ANAC58       --------->ANAC58  <-----------HVH21   <---------At4g35610------>ZmHOX2a(1) <---- ----RAV1(1)      <---------MYB52(1)  --------->DEAR3(1)   --------->At4g35610=======================   gcgtctccatctttctcttcgttaagctacgcagcgaccaccgtcgtatgcctggtccttctgctctcttctctaagctcctcgccgtttggaaagccac  16990600       <---------ARR11(3) <---------ANAC46 ----------HVH21 ------>ALFIN1 ----PIF5 ----MYC2 ----MYC4 --->MYC2 --->MYC4 ----MYC3 --->PIF5 ---->O2 -----O2<------ZmHOX2a(2) ---->ANAC55(2) -----TGA1a              <---------At4g35610 ---->TGA1a          <-----------RAV1(1)                        <----------DOF2 ----ABF1            --------->ALFIN1          <---------AHL20(2) --->MYC3           <---------ZAT14            --------->AHL20(2) <<<<<HY5------>ZmHOX2a(2)                  --------------->AGL15 <<<<<AtMYC2 --------->ANAC58     <---------At4g35610         --------->HSFC1(2) <<<<<ABI5   --------->ANAC58     --------->At4g35610    --------->ALFIN1 =====bZIP_DOF<-----------HVH21<---------At4g35610<---------WOX13(1)          <-----------GT1 ---->bZIP60(2)     --------->ZAT14         <---------------AGL15         <----------DOF2 -----ANAC55(2)    <-----------RAV1(1)      <----------DOF2   <---------HSFC1(2) ==============HOX2a_HOX2a  <---------At4g35610<---------YAB1 <---------HSFB2a(1)             <------   gtgtcgcgagatcgctcgtcactgtggtgctgatgctgctcagtttcttttaattgaaggtggaagctttgtgcttcttttctccattgctgttttagct  16990700  Previous    Next  AGI:  At4g35870.1    Description:  similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT3G21620.1); similar to hypothetical protein OsI_009692 [Oryza sativa (indica cultivar-group)] (GB:EAY88459.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23258.1); similar to unknown [Sorghum bicolor] (GB:ABE77195.1); contains InterPro domain Protein of unknown function DUF221; (InterPro:IPR003864) Range:  from: 16990176    to: 16992891    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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