Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------->TEIL          ---------->DOF2                                                               <-----------ARR10        ----------->TBP                                                                 <---------ARR11(1)        <---------YAB1                           ------>ZmHOX2a(1)                      --------->ARR14(2)      <---------------AGL15                     <---------------AGL15                  <---------ARR14(1)      --------------->AGL15                     --------------->AGL15                <---------ANAC55(2)     <-----------------AG                       --------->TOE2(3)                    <---------ANAC58     ----------------->AG                      ======================================================     ===========================================================MADS_MADS            --------->ANAC55(2)     <-----------------AGL1                    ----------------->AGL3                <---------ANAC58     ===========================================================MADS_MADS         <---------MYB52(1)     ----------------->AGL3                 <---------GLK1(1)                <-----------GT1     <-----------------AGL3                 --------->GLK1(1)             --------->ATHB51<---------MYB59     <---------YAB1                <---------GLK1(2)                      <---------ICU4<---------ARR14(2)     ----------------->AGL2        <---------ARR11(3)                     <---------AHL20(2)     <-----------------AGL2        --------->ARR11(3)                     --------->AHL20(2) -------TEIL                     <---------TOE2(3)                       <---------AHL20(2)  <------- -----TOE1(3)             --------->YAB1 <---------TOE2(3)          ----------->GT1  <---------ANAC46 -----TOE2(3)  ---------->DOF2   ----------->ARR10     ----------->GT1   --------->ICU4<---------CCA1(2)   ggttcttactataaaaggaaaggaagaatcaaaataagattttgagatttcctcaaatagttaacatgtatagaaattatttctgtttcgtatctaattg  16980600                 --------->ATHB12                <---------YAB1                                                --------->LBD16     ---          <---------ANAC46                                             --------->ARR11(3)      ------          <---------ANAC58              --------->YAB1                 <---------ARR11(3)      <-----       <---------WOX13(1)               --------------->AGL15         --------->CCA1(1)       <------      <------------CBF                 ----------------->AGL3    --------->YAB1               -------     --------->ATHB12                 ------>MYB83               >>>>>>>>>RAP2.2              -------    <---------YAB1                    ------>MYB46(1)          --------->GLK1(2)           --------->YAB1  <---------At4g35610                 -------->P            ------------>CBF  <---------MYB52(1)  <-- =======================================================MADS_MADS--------->TOE2(3)        <---------YAB1 -----CBF <---------ANAC58     ------>ZmHOX2a(2)    <---------YAB1    --------->RVE1(1) --------->YAB1   tttcttctgattgcttgtatgattcgaaaatgatcgaccctaccatattttggtattattcagacaatctaaatatctcccgtagttttcttataattaa  16980700 ------>ARR11(3)                           --------->AHL20(1) --->AHL20(2)                              <---------AHL20(1) ----AHL20(2)                 <----------ID1                             <-----------GT1 ---AHL20(2)         ----------->GT1       --------->AHL20(2)       <----------DOF2 -->YAB1  --------->AHL20(2)--------->MYB52(1)                 <----------DOF2            <----------DOF2 -->AHL20(2)        <---------TOE2(3)      <---------AHL20(2) <---------DAG2          <---------CCA1(2) -------ARR11(3)  <---------AHL20(2)----------->GT1        <-----------GT1       <---------At4g35610   aatctaacacattttaaaaatttatgtaaaaaacgaagaagttattttattaaactataaataaccttttctttataactctctgcttctatctttcgag  16980800                <---------AHL20(2)                --------->AHL20(2)                --------->AHL20(1)               --------->AtLEC2          ------>MYB83               --------->AHL20(2)                --------->ANAC58          -------->P         --------->AHL20(2)                      --------->ANAC58          ------>MYB46(1)      -------->HAHB4                        <---------YAB1               <---------MYB111(1)      ----------->GT1                     <---------ICU4                 <---------MYB46(2)--------->TOE2(3)      --------->ATHB12                   <------ZmHOX2a(2)               <---------MYB111(2)   <-----     <---------YAB1                     <---------ARR11(3)       <-----------GT1 ----------->GT1     <---------ATHB12                   --------->ARR11(3)   <---------ARR11(3) <---------TOE2(3)     --------->ICU4       <---------ANAC46--------->YAB1     <---------GLK1(2)  <---------TOE1(3)   cattgaaatgattaaaaaaaaattagtggtgttttcaacatagatcatgacaggcaaaccctagattttacttcacctacttgaggttaaaaaacttaat  16980900                    ------>ZmHOX2a(2)                   --------->HSFB2a(1)                   --------->GLK1(1)                   <------ZmHOX2a(2)                  <---------ARR11(3)                  --------->ARR11(3)                  <-----------ARR10                  <---------ARR11(1)                  <---------ARR14(2)                  --------->ARR14(2)                             *TSS                 <---------CCA1(2)                               <---------CCA1(2)     --------->ANAC58                 --------->ANAC58    <----------DOF2     --------->ANAC58     --------------->AGL15  <---------CCA1(2)      <----------DOF2 -------CBF      <---------ARR14(1)   --------->ANAC58  ------>ZmHOX2a(1)   tgcaagtaggccagacatcggatcttctctcttaagggctaagcaaaacccatctctcctctttcttctatcttctttctcttccttctctcttctcttg  16981000                                                                       --------->LBD16                                                                      <---------ANAC55(1)                                                                      <---------ANAC55(2)                                                                      <---------ANAC58                                                                      <---------HSFB2a(2)                                                                      ----------->GT1                                                                      --------->ANAC55(2)                                                                      <---------ANAC46                                                                      <---------ANAC58                                                                     <-----------------------TaNAC69(2)                                                                   <---------ARR14(2)                                                                 <------NtERF2            <---------ZAT2                                      <---------MYB46(3)            --------->ZAT2                                     <---------ANAC58            <---------At4g35610            <---------ANAC58    <---------ANAC58            --------->At4g35610       ------>ZmHOX2a(2)        <---------ANAC46          --------->ZAT14           --------->ARR11(3)        <<<<<<<<<E2Fd     <---------ZAT14                <---------ARR11(3)        <<<<<<<<<E2Fc     --------->ZAT18            --------->LBD16           <----------DOF2     --------->ZAT14         <---------At5g28300         --------->ATHB12                     <------   --------->ANAC46         <-----------GT1<---------ANAC58   <---------LBD16   --------->AHL20(2) <-----------GT1    --------------------->WRI1     <----------DOF2 --------->ARR14(2)         -------   tataaactccactgagctctgtttttgtttttaccgtagatcgtttcgagtctctttaatctttggcgggttccgtaaaaaaaaaaatggcctcttctag  16981100                                                                     ------->TEIL                    <---------CCA1(2)                             --------->ANAC58      --------->LBD16                  ------>ZmHOX2a(1)                               --------->ANAC58      --------->At4g35610   <---------ARR14(2)     <---------ANAC58                   ---------->DOF2            <---------At4g35610   --------->ARR14(2)     <---------ANAC58               <------ZmHOX2a(1)    <-----------GT1 ---HSFB2a(2)     <---------CCA1(2)                     ----------->GT1  <---------ANAC58      >>>>>> -->HSFB2a(2)  ---------->ID1                           --------->ICU4   <---------ANAC58      <-----   attccaatctgggttttgtcctatctcttcgtgtccctctcttgagaatttcatcgaaaggattaaagacgcatgtcgtttcaccctctccgctgttcta  16981200                                           <------MYB46(1)                                           <------MYB83                                           <---------DEAR3(2)                                          --------->MYB59               <---------GLK1(2)                                   <----------DOF2                  <---------ANAC58             <---------DEAR3(1)    <---------DAG2                   <---------ANAC58            <------NtERF2      ---------->ID1                 <---------YAB1 >ZML2    <---------DEAR3(1)<<<<<<<<<TBF1<---------ORA47(1) --------->YAB1          <---------GLK1(2) ----HSFB2a(2)         <----------DOF2--------->MYB59    ------>ZmHOX2a(1)  <----------DOF2   <------   gggacaattctctcggcggtcttgactttcttcttcgctttaggtcggtctcttgtttcctattacaatttcttgattcttttcaagaatgtctctccac  16981300                                                            <---------ZAT14                                                           <----------DOF2      <---------ARR14(2)                                                     --------->bZIP60(1)        --------->GLK1(2)                                                     <---------GLK1(1)          --------->ARR14(2)                                                   --------->YAB1    <---------ANAC46                                               --------->ATHB12 <-----------RAV1(1)                   <---------DAG2      --------->ATHB12    <---------DAG2 <---------ANAC46                   <----------DOF2   <---------WOX13(1) <-----------GT1   ----------->GT1<----------DOF2        <----------DOF2        <----------DOF2 <---------ICU4   <---------ZAT6 <---------GLK1(2) ---ALFIN1      ------->TEIL------>ZmHOX2a(1) <---------YAB1--------->ZAT14  ----------->ARR10   ttcttggaaacttttatgaagctttttgtcctgctttggattgatttgatcattgatatcactttactgttgagtagggtagaatctgcaactttgggtt  16981400                                            <---------ANAC46                                            <---------AtLEC2                              <------MYB46(1)                                            <---------ANAC58                            --------->ALFIN1                                           --------->ATHB12                 --------->ANAC58                                    <---------ZAT18                         --------->ANAC58 --------                                  <---------ZAT18 <---------ZAT18 <---------YAB1    ---------->DOF2--             ---------->DOF2 <---------ZAT14<---------ANAC58    <----------DOF2--------->MYB52(1)  <-      <---------ZAT6 <-----------GT1--------->ZAT18           <XXXXXXXXXXXXXXXXXXXXXMIR402<------MYB83   tttatgtagagctaagaaagttgtttccttcttcagtgggcacattgcttggagcacttactggagctttgataggccaagaaaccgaaagtgggtttat  16981500  Previous    Next  AGI:  At4g35840.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL4M (ATL4M) [Arabidopsis Thaliana] (GB:Q8GT75;GB:Q8GXV3;GB:Q9SZT2); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G17730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42935.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 16980965    to: 16982368    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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