Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->YAB1                                                                  <-----------HVH21                                                                 --------->WOX13(1)                                                              <---------ARR11(3)                                                              --------->ARR11(3)                                                             --------->CCA1(1)                                                           --------->YAB1                                                          <---------YAB1                        <----                                                         --------->AHL20(2)                    ------                                                         --------->AHL20(1)                    ------                                                         <---------AHL20(2)                    <-----                              --------->YAB1             <---------AHL20(1)                    ======                             <------ZmHOX2a(2)          --------->YAB1                        -------                            --------->ARR11(3)         <---------YAB1                         -------       --------->YAB1       <---------ARR11(3)        --------->AHL20(1)                      <------ ------>RAV1(1)        ------>MYB46(1)                --------->AHL20(2)                     -------- --->ANAC46            ------>MYB83                 <---------ARR11(3)                      <------ZmHOX2a(2) --ALFIN1             --------->MYB52(1)            --------->AHL20(1)                   --------->DEAR3(1) ->AtMYB61           --------->DEAR3(1)             --------->AHL20(2)      ---------->DOF2--------->ARR14(2) >ANAC46            --------->MYB46(3)              <---------AHL20(1)    --------->CCA1(2)<---------ARR14(2)   acatttctctcataaaactctcaccaacgagatcataacaacgtcttctaacaaaatattataatatctatcagagataaaaggaaactcaccgatcctg  16977700                                                                                             --------      ---------->DOF2                                                                        <------- ----------->GT1                                                                       <---------LBD16 ------>ZmHOX2a(2)                                                                     --------->HSFB2a(2) -----TOE1(2)                           <---------ALFIN1                           <---------ARR14(2) >ZmHOX2a(1)                      <---------ARR14(2)                               <---------GLK1(2) --->LBD16       <---------At4g35610   --------->MYB46(3)                          --------->ARR14(2) ----------------WRI1             --------->ARR14(2)                              <------ZmHOX2a(1) =======HOX2a_HOX2a            <---------MYB59                                ---------->DOF2-------- -->TOE2(2)      --------->At4g35610 <-----------GT1       --------->ANAC58 --------->HSFB2a(2) -->TOE1(2)   <--------P --------->MYB111(1)               --------->ANAC58 <---------HSFB2a(2) ---LBD16   --------->ANAC58 <---------At5g28300      --------->HSFB2a(2) <---------LBD16    <------- --->RAV1(2)--------->ANAC58<-----------GT1--------->AtMYB61          <---------YAB1   <---------HSFB2a(2)   ggatcgttcaaagcaggtaagctgtagtagttaccgaattcaccaccatcaggcttctctaacgccttcaatatgcttcggaaaggattctcggaagctg  16977800                                --------->YAB1                        --------->ANAC46                      --------->ANAC46                  <------ZmHOX2a(2)                  --------->CCA1(2)                 <---------ARR11(3)                 --------->ARR14(2)                 <---------ARR14(2)   --------->ANAC46   <---------ALFIN1                                  ----------->GT1<------------- ->At4g35610     --------->AGP1<---------ATHB12             <----------ID1           <---------DEAR3(1) --ZAT2          --------->ARR11(3)                         ----------->GT1      --------->At4g35610 ->ZAT2         --------->GLK1(1)                         --------->MYB52(1)   --------->YAB1 --At4g35610    <---------GLK1(1)                --------->GLK1(1)   --------->At4g35610       >>>>>>   aaaacacatcagaaacagagatccacacagcaaatcaaaatacagaaccagatttcaaaaaaacgaaaaatagctggaaaatcagcatcggcgagaagaa  16977900                                                                                            <------ZmHOX2a(2)                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           <---------ARR11(3)                                                                                           --------->AGP1                         ------>ZmHOX2a(2)                                                 --------->ARR11(3)               <--------HAHB4                                           <---------ZAT14   --------->GLK1(1)               <---------ICU4                                <-------TEIL       ---------->DOF2     <               --------->YAB1                               --------->CCA1(2)--------->ANAC58       - --------WRI1 <---------ATHB12  ----------->GT1         <---------WOX13(1)   --------->ANAC58------>ZmHOX2a(2) >>>TBF1     ------->TEIL----------->GT1             <---------YAB1  <---------ANAC46     <---------GLK1(1)   gaaataagaaacatgaatcattttggatcgtaaacagataaatcgatacccatggatgatagatacaagtcgagtgaagaagcaaagtagagagatctgt  16978000                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   --                                                               <---------AHL20(2)                 ---                                                      --------->ARR14(2)                          <--                                                      <---------ARR14(2)                         ----                             <------MYB46(1) ----------->RAV1(2)                                 ----            ----------->GT1  <------MYB83   ------->TEIL     <---------RVE1(1)                   <---          ---------->DOF2   <---------MYB46(3)    <---------At4g35610                      ----------  <---------At4g35610      <--------P  --------->REM1(1)     *TSS <-----------TBP     <---------AHL20(2) ---------HSFB2a(2)  --------->At4g35610 --------->ANAC46   --------->ARR11(3)       --------->AHL20(2) -------->HSFB2a(2)  <---------LBD16  <---------REM1(2)     <---------GLK1(2)   ----------->GT1  <---   tttcagaagagagaaagtttataagcggagttggtgaggctacacgagcctgagccgattcagattttttttatatgtaagaaggaaataaatctgacag  16978100      <---------DEAR3(1)      <---------ZAT18     <---------ANAC46   <---------MYB46(3)  --------->ALFIN1 --------->LBD16 ---------ANAC58 ---------ANAC58 ---------ANAC46 ------TEIL ---->ZmHOX2a(2) ------>CCA1(2)                                  <---------AHL20(2) ----ZmHOX2a(2)                                 <---------YAB1 ----->AGP1 <----------DOF2                    <---------AHL20(2)                <----------DOF2 ----->ARR14(2)                 <---------MYB46(3)   <---------AHL20(2)          <---------DAG2   --- ------GLK1(2)   <-----------HVH21           <---------YAB1               <-----------GT1         <-- ->HVH21<---------PCF2   ----------->HVH21 <---------AHL20(2)      --------->TOE2(3)              <-- ------ARR14(2)  <-----------TGA1         <---------YAB1         <---------AHL20(2)               <--   atccgtggtgggctcttttcgtcagaactgatggctgtttgatttttatttttattttatattctattttcttaattatccaactttttttttttgtgaa  16978200           <----------DOF2           <---------DAG2                            <---------AHL20(2)           --------------->AGL15                <---------YAB1           <---------------AGL15                --------->ICU4          <---------ANAC58                    <---------ICU4          <---------ANAC58                   --------->ICU4                                ------->TEIL      <----------DOF2             <---------CCA1(2)  --------->AHL20(2)         ------>MYB46(1) ------>ARR14(2)                --------->YAB1--------->YAB1<-----------GT1     ------>MYB83 -------ARR11(3)                --------->AHL20(2)<---------ARR11(3)           --------->WOX13(1) -------ARR14(2)         ----------->GT1   --------->WOX13(1)                 --------->AtMYB61 ---------GT1            <---------ANAC55(2) <---------ATHB12         <---------YAB1   --------------   tatccattctttgcttttttttgtatcaagtgaattatatctgttcaatcatgattttattttcacaaacttataatccaccaatctgatatgtgcctct  16978300                                                                <---------WOX13(1)                                                     <---------O2    --------->AHL20(2)                                                   <-----------GT1--------->ATHB12       --------->ARR11(3)            <---------TOE2(3)        --------->ATHB12--------->TOE1(3) ->AtSPL8         --------->ANAC55(2)<---------TOE1(3)       --------->ICU4   --------->TOE2(3)   tctctatagtatctagttttatgtaatccaattttcttcaaggtttctcaatttcacatggcattgattgattaaaaaaaccttaatttctgacaaacat  16978400                                                                          --------->AHL20(1)                        --------->ANAC58                                  --------->ARR11(3)                        --------->ANAC46                                  <---------ARR11(3)                        --------->ANAC58                                  <---------AHL20(1)           ------>ZmHOX2a(2)     --------->AHL20(2)                      --------->YAB1        --------->YAB1<---------ALFIN1   --------->ANAC58      --------->ANAC58       ------>ZmHOX2a(2)       <---------ATHB12------->GAMYB     --------->ANAC58      --------->ANAC58    --------->YAB1   -   <---------ATHB12--------->REM1(1)     --------->ANAC46      --------->ANAC46   <---------ATHB12<--   atacaatcaatgatcgtcgttacaacacaccaaaaaaaaatacacacaatgacacaaacatatacaagacaccaaaaatattcaatgatcgtcgtttatt  16978500                                             --------->ANAC58                                             --------->ANAC46                                      ------>MYB46(1)                                   --------->AHL20(2)                                      ------>MYB83                                    --------->AHL20(2)                                      -------->P                                    --------->AHL20(2)                                     --------->MYB55(1)                           --------->AHL20(2)                                    --------->DEAR3(1)                            <---------AHL20(2)                                    <---------ALFIN1                            --------->AHL20(2)                                    --------->AtMYB61                           <---------AHL20(2)           ----------->HVH21        <---------MYB46(2)                        --------->AHL20(2)         ----------->GT1            <---------MYB55(2)                        <---------AHL20(2)      ----------->RAV1(2)           <---------MYB111(1)                     --------->AHL20(2)    <---------ALFIN1                --------->MYB46(3)                      <---------AHL20(2)    --------->DEAR3(1)              <---------MYB111(2)                 --------->AHL20(2)    --------->AtMYB61              <---------MYB52(2)                  --------->AHL20(1)   --------->MYB46(3)              --------->MYB46(3)                  <---------AHL20(1) --------->ANAC46                 ------>NtERF2        <---------AHL20(2) <---------AHL20(2) <---------ALFIN1                --------->DEAR3(1)    --------->AHL20(2) --------->AHL20(2)<-------- --------->AtMYB61         --------->RVE1(1) --------->AtLEC2         --------->AHL20(2)<---------AHL20(2) -------->MYB46(3)         --------->CCA1(1) --------->ANAC58       --------->AHL20(2)<---------AHL20(2) ---------GT1          --------->AHL20(2)  <---------AtLEC2       --------->AHL20(2)<---------AHL20(2)   tcaccaccacctggtgacaaaaccaaaaaatatcgccaccaacctgcatgcaacgatttaaaaaaaaaaaaaatatatatatatatatatatatataaaa  16978600  Previous    Next  AGI:  At4g35830.1    Description:  aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO). Identical to Aconitate hydratase 1 (ACO1) [Arabidopsis Thaliana] (GB:Q42560;GB:Q9SZT1); similar to aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative [Arabidopsis thaliana] (TAIR:AT4G26970.1); similar to aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative [Arabidopsis thaliana] (TAIR:AT2G05710.1); similar to cytosolic aconitase [Nicotiana tabacum] (GB:AAG28426.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42934.1); similar to putative aconitase [Prunus avium] (GB:AAL13084.1); contains I Range:  from: 16972602    to: 16978061    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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