Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------>ZmHOX2a(2)                                                                                       ==============                                                                                       <------ZmHOX2a(2)                                 --------->ANAC46                                     --------->ARR14(2)                          <-----------ARR10                                           <---------ARR14(2)                          --------->ARR11(3)                                         <------ZmHOX2a(1)                          <---------ARR14(2)                                       <---------TOE1(2)                          <---------ARR11(1)                                     --------->TOE1(2)                          <---------ARR11(3)           ----------->GT1          --------->YAB1                          --------->ARR14(2)     <---------At4g35610           <---------YAB1                         <---------ARR14(1)      --------->ZAT2              --------->YAB1                         --------->GLK1(1)       <---------ZAT2             <---------YAB1 -------At4g35610        <---------CCA1(2)       --------->At4g35610      --------->YAB1============= ------>At4g35610  ---------->DOF2 --------->ANAC46  <------ZmHOX2a(1)   --------->AHL20(2) ---------   tgctctctcaacatttacatccaaagcatatctatacacaaaatccatttcagcaggaagtcaaatttgaaaacatttattatcataggatccaaaaaga  16950200                                                 --------->LBD16                                     <------ZmHOX2a(2)                                    --------->ARR11(3)                                    <---------ARR11(3)                            --------->ARR14(2)             <---------YAB1        <---------GLK1(1)                              <---------ARR14(2)-        <------ZmHOX2a(1)          --------->GLK1(1)                              <---------GLK1(2) -    <---------ZAT2       --------->ANAC58      --------->TOE1(2)               ------>ZmHOX2a(1)  ---    --------->ZAT2       --------->ANAC58      <---------LBD16                 --------->LBD16------- ==============HOX2a_HOX2a        ----------->ARR10                           <---------LBD16-------- ==============HOX2a_HOX2a       <------ZmHOX2a(1)                         <---------GLK1(1) <------- ->DOF2 ====================================HOX2a_HOX2a             --------->ATHB12<-------TEIL-----   ttaccgagcaggaagacgattgaagtgaagccagaggagatcatcaaaaccagggaaattagcttcttcgtaattggattcctggattcgttgaagaacc  16950300                                                                          --------->LBD16                                                                         <---------HSFB2a(2)                                                                         --------->ANAC46                                                                         --------->HSFB2a(2)                                                                         --------->ANAC58                                                                        <---------LBD16                                                                    <---------At4g35610     <---------ALFIN1                                           --------->ARR14(2)    --------->SPL7                                           --------->ANAC58  <---------SPL7           <---------ANAC46                  --------->ANAC58  --------->ZAT14        --------->ABI4(2)                   --------->ANAC46                  <----- -------------->AtSPL8   --------->ZAT14                    <---------LBD16                  ======== -------------->AtSPL3   --------->ZAT2                    <---------ALFIN1                  ======== --------------->SPL14   --------->At4g35610          --------->At4g35610--------->ANAC55(2) ------>ZmHOX2a(1) >TEIL  --------->AtMYB61<---------At4g35610    ----------------------->TaNAC69(2)  ------>ZmHOX2a(1) ->ARR14(2)             --------->ALFIN1      <---------MYB52(1)<---------ARR14(2)  ================= --ARR14(2)         --------->SPL7       <----------DOF2 -------->P --------->At4g35610<-----------HVH21 ---->AtMYB61   <-------TEIL         <----------DOF2  <---------At4g35610--------->ANAC58--------->ARR14(2)   tcaccgtacacctccagtttcatacggtgctgtctagggctttctttcgttattgaagctaccacggctctgcttccgcaactctcctccgtctcctctt  16950400                                                                                        ------>ZmHOX2a(1)                     <------ZmHOX2a(2)                                                  =============                <---------At4g35610                                       ------>ZmHOX2a(2)         -                --------->At4g35610                                       =====================HOX2a_HOX2a    --------->DEAR3(1)                                                  <---------ARR11(3)         -- ------>ZmHOX2a(2)  --------->ARR14(2)                             <------ZmHOX2a(1)   --------->TOE2(3) -----DOF2   ---------->DOF2----------->GT1            --------->GLK1(1)--------->ARR11(3) --------->ARR14(2) =======HOX2a_HOX2a <---------ARR14(2)     --------->ANAC58        ==============HOX2a_HOX2a -------- ===========================HOX2a_HOX2a    ----------->GT1         =========================HOX2a_HOX2a =======HOX2a_HOX2a--------->At4g35610     --------->ANAC58  --------->ZAT6          <------ZmHOX2a(2)   tgatcgccatcgcaaaacagcagatcagaattgaaaaactctctcaagtaaaaccagaattcaacagtaggagtgatctcttcttcgatcctaaatccac  16950500             ------>ZmHOX2a(2)         --------->KAN4(1)         <---------KAN4(1)    --------->DAG2        <---------KAN4(2)    ---------->DOF2  ----------->GT1           --------->MYB52(1) --------->DAG2             ---------->DOF2 ===================HOX2a_HOX2a       --------->ICU4     --------->ANAC58 -------->DAG2            <---------MYB52(2)             --------->ANAC58 -------->DOF2        <-------TEIL  ---------->DOF2 --------->At4g35610 --------->AGL3 --------->LBD16  <----------ID1     <---------At4g35610             ----------->GT1*TSS   aaaaaggtagaatgatcccagagattcaactaaaggcgaaaagattagagagtgagaagacggaaattgaagagaagagagagagagggtgtaatgtatg  16950600                                                            --------->bZIP60(2)                                                            --------->O2                                                            --------->ANAC46                                                            --------->TGA1a                                              --------->TOE1(2)                                             --------->ANAC58                                             --------->ANAC58                                             <---------ANAC55(2) --------->ICU4                                   <---------MYB52(1)       --------->ANAC58                       <-                                  ====================================MYC_MYB                 -------                                  <-------GAMYB             --------->ANAC58                  <------             <-----------RAV1(2) <---------ANAC46           <---------O2                  <---------PCF2          --------->ANAC58       <---------ANAC58          <-----------STF1            --------->ALFIN1          --------->ANAC58       <---------ANAC58 <------ZmHOX2a(1)                  --------->ALFIN1        ---------->DOF2    ------->TEIL      --------->ANAC46<-----------TGA1    <---------YAB1    --    <-------GAMYB   <------ZmHOX2a(1)   ----------->HVH21 <---------ALFIN1  <-------TEIL  <----------   agtttgggttgaaagccagggaggacatgaacgtttcgttgtgtaacacgtaggactcatccacgtcattatgtagggtccatatgagtgtgggtcacga  16950700                               --------->AHL20(2)                             <---------------AGL15                             <----------DOF2                       <---------HSFB2a(2) --------ARR14(2)            --------------->AGL15                 --------->HSFB2a(2) -->O2                    --------->ICU4               <----------DOF2 ---O2    --------->AHL20(2)<-----------------AGL3     <---------DAG2 ------->ARR14(2)    --------->YAB1                   <---------ANAC58             <---------MYB46(3) -HVH21   <---------AHL20(2)<-----------------AGL2    <---------ANAC58         <---------AtMYB61   gaatactcttatttttttagttattgtaatgctttaaatggataatggacagttttgcttttttggcttcgagataaatgtatggtggttttcatgttta  16950800                                                   <---------AHL20(2)                             <------MYB83        <---------AHL20(2)                             <------MYB46(1)    <---------AHL20(1)                         <---------MYB46(3)     --------->AHL20(1)                      <---------MYB46(3)       <---------AHL20(2)                      --------->YAB1                  --------->ICU4      <---------DAG2                                  <---------YAB1          ---------->DOF2--------->MYB55(2)--------->AHL20(2)                       --------->YAB1     ---------->DOF2 <---------AtMYB61<----------DOF2<---------AHL20(2)    <---------YAB1       <----   tgaagcaaaaagaaaaggagatgatggtggatggtgatgacttttttatatatatttttttttatgttttgctacttatgatacaaatatgatgacatat  16950900                                                                                       --------->MYB46(3)                                                                                      --------->ANAC46                                                                               ----------->GT1                                                                             ------>ZmHOX2a(2)      <                                                                <---------ANAC55(2)   --------->ANAC58                                                              --------->AHL20(2)  <-----------GT1  --                                      --------->ZAT6       <---------ICU4  --------->ARR11(3)--------                              ---------->ID1            ----------->GT1    <---------ARR11(3)-------- -----AHL20(2)       <-----------GT1<-----------GT1<---------YAB1   ---------->DOF2   --------->ANAC58   taatggacatgtttgtttttatttcactatttgttgtataacactataagtttaatattggtaattacataaaagttgatcttgttacaaccaataggca  16951000                <-------TEIL               --------->CCA1(2)          <---------TOE1(1)                                                           <---------ANAC58       <---------SPL7                                                     <---------YAB1       --------->TOE1(2)                                              <---------ARR11(3)       --------->TOE2(2)                                              --------->ARR11(3)      --------->ANAC55(2)                                        ----------->RAV1(1)  <---------ANAC58      <---------ANAC58                                           --------->MYB52(1)   <----------DOF2      <---------ANAC55(2)                                     --------->ANAC58   <---------ANAC58      <---------ANAC58                                        --------->ANAC46   <---------ANAC58     --------------->AtSPL3                                   --------->ANAC58   --------->ETT(1) ---------------------WRI1                                  --------->MYB52(1) <-----------HVH21 ------->YAB1 <---------SPL7               <----------DOF2 ===================HOX2a_HOX2a         <-- ->ANAC58 <---------TOE2(1)       <---------YAB1           ------>ZmHOX2a(1)  <-----------RAV1(1) <-- ->ANAC58--------->SPL7         --------->YAB1           --------->YAB1<------ZmHOX2a(2)          ---   atagcaatacgtacgaggtacgagtgagcctaaatgataataggcctttcaaatttcaatcctaacgcaacagatcatttttgtcgggccttgtggccca  16951100  Previous    Next  AGI:  At4g35780.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G17700.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G38470.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06436.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06437.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47444.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Pr Range:  from: 16946526    to: 16950599    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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