Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --           <---------ALFIN1                                                                       ---           --------->AtMYB61                                                                    -----          --------->MYB46(3)                                                                  <------         ------>NtERF2                                                                      ---------    ------->PIF5              ------->TEIL                                                  <--------    <-------PIF5           --------->ANAC46                    --------->ANAC46             --------- -------->LBD16            --------->ANAC58                    --------->ANAC58            --------->ARR14(2) ------->ANAC46            --------->ANAC58         <--------P --------->ANAC58            <---------ARR14(2) -------LBD16       ----------->GT1       <---------ZAT18   <---------ARR14(2)           --------->DEAR3(1) --bZIP60(1)       <----------ID1        ----------->HVH21  --------->ARR14(2)         ------>NtERF2 ->bZIP60(1)  --------->AtMYB61     ------>NtERF2<---------TOE2(3)                    --------->DEAR3(1)   accgcaagtgccaccaccaatagggcaaaacgcatcggagccagtgaccttgaggtaagtcaaatacgcagtgtctaacatcccaataccgccgattccg  16944300                                                                                    ------>ZmHOX2a(1)                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                            <------NtERF2                                                                           ------>NtERF2 --------SPL7                                                            --------->ATERF1(1) ------->ZAT14                                                          <---------DEAR3(2)      ----- ------>ALFIN1                            --------->REM1(2)         --------->DEAR3(1)          ----- ---->LBD16                    --------->ARR14(2)                   ----------->HVH21<---------ALFIN1 ---LBD16                      <---------ARR11(3)           <------ZmHOX2a(1)   <---------ARR11(1)  < >ARR14(2)                     <---------ARR14(2)        <------ZmHOX2a(1)--------->ALFIN1     <----- -ARR14(2)           ----------------------->TaNAC69(2)--------->ALFIN1 <---------ATERF1(1)   <------ >GLK1(2)          ----------->GT1  <---------ZAT14   <------ZmHOX2a(1)<---------DEAR3(1) <---------MYB52(1)   gtgtaccagttgtatgtcgaactgttactagtagatacttcacttgtagacgatgaggaggaggaagacagcgacggtgccgaatcctcaccgttttccg  16944400                                --------->GLK1(1)                              <------ZmHOX2a(1)                              ==================HOX2a_HOX2a                             --------->ANAC58                             --------->ANAC58                            <---------TOE2(2)  --------->At4g35610       <---------TOE1(2)                 --------->At4g35610         --------->ZAT14  <---------At4g35610 <---------ARR14(2)           ------>MYB46(1)                    --------->ANAC58 ---->LBD16           --------->ARR14(2)           ------>MYB83                       --------->ANAC58 ->NtERF2             <---------GLK1(2)         ----------------->AGL1          <-----------HVH21 -----------RAV1(2)--------->YAB1        <------ZmHOX2a(2)    <---------At4g35610     --------->ANAC46 ----RAP2.6(2) <---------AHL20(2)       <-----------HVH21     ----------->RAV1(2)<------ZmHOX2a(2) -- ---LBD16     --------->AHL20(2)<---------GLK1(1)<---------MYB59          ----------->HVH21  <-------   gctcagatgaagaacatttaatcggaatcgcaggaaatctccgatcagagacctaattcagaacatctgacttcaaatgaccgatcacacactactgtca  16944500                                                                               <---------RAP2.6(3)                                                                            --------->At4g35610                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                       <---------ANAC55(2)                                                    ----------->HVH21  --------->ANAC55(2)                                                   --------->DEAR3(2)  --------->ANAC55(1)                       <---------At5g28300        <---------At5g28300 <---------LBD16                      <-----------GT1  --------->YAB1--------->MYB52(1)--------->ANAC46          ----                --------->ANAC58       <------ZmHOX2a(1)        --------->ARR14(2)               ----         <---------ANAC55(2)  --------->ARR14(2)  <---------DOF5.7(2)--------->MYB52(1)          <--- ------->ZAT14  --------->ANAC58    --------->HSFB2a(2)     <------ZmHOX2a(1) --------->RAP2.6(2)---- ----HVH21 ----------->HVH21  <---------ARR14(2) <-----------GT1<---------ARR14(2)    ------->TEIL   ctgaagaaaacacatgacaagaatttacctcgaatcgtctaggataagaagttaccgacggaggagaaacctcacggaagccgaaatgaaactgacaaga  16944600                                                                                   <---------ALFIN1                             <------NtERF2                                        *TSS      ---------        <---------MYB52(2) <---------DEAR3(1)  >>>>>>>>>>>>>>>>>LFY             --------->ANAC46 ----->ANAC46        --------->YAB1 --------->GLK1(2)                          --------->At4g35610 ----->ANAC58  --------->ANAC58    <---------GLK1(2)                           <---------At4g35610 -------ID1    --------->ANAC58    <---------ARR14(2)                         <---------ALFIN1 ----->ANAC58  --------->ANAC46    --------->ARR14(2)                       ------>ZmHOX2a(1)   cgacacagaaacaaacctcgccatcatcgtcgtcgaagaatcgctattccaccattgttaacttcatcatcttctctcctccgctccactatctcagcca  16944700                                                  --------->ATHB51                                                  <--------HAHB4                                               --------->TOE2(3)                                              <-------TEIL   --------->YAB1                                              ----------------->AGL3                                              ------>ZmHOX2a(2)            --------->SPL7                                             <------ZmHOX2a(2)            --------->MYB52(1)                                            --------->ARR14(2)           <---------SPL7                                 <---------YAB1--------------->AGL15    <----------DOF2             <                              --------->ARR14(2)  <---------ICU4 <------------CBF               <----   ------------>CBF           <---------ARR14(2) --------->ICU4<---------YAB1             <---------SPL7 >ANAC46<------------CBF------>NtERF2       <---------ARR14(2)------------>CBF            <----------   cttgtttcaatattgggcctaaacgaggcccaaatacgataatttggatccataattagtttatcacaattgggccttacggtcttcttatccgtccgag  16944800                                   --------->DEAR3(1)       <---------ARR11(3)                                  <------NtERF2             <-----------ARR10                           --------->TGA1a              --------->YAB1                           --------->O2                <-------TEIL                           <---------TGA1a          --------->ATHB12      <-----------GT1   --------->ANAC58        <---------O2            <---------YAB1    <XXXXXXXXXXXXXXXXXXXMIR158A    <   --------->ANAC58 --------->ANAC46               --------->ICU4   <------------CBF              --- ---------At4g35610 --------->ANAC58             <---------ICU4  --------->ANAC46                 <-- -------HVH21       --------->ANAC58             --------->YAB1  --------->ANAC58                <--- -HVH21    ------>ZmHOX2a(1)   <---------ABI4(2)<---------YAB1   --------->ANAC58          <---------   tcagcaagttatcctcttcaacacgactcacgaggcaccgagttggacttatcatgattcattatctacgcattgtttacattttggaatcgactttggt  16944900                                                                      <---------ALFIN1                                                                      <---------CCA1(2)                                                                  --------->ANAC58                                                                  --------->ANAC58                                                             ----------->HVH21                                                           <---------bZIP60(1)                                                           <---------bZIP60(2)                                                           --------->O2                                                           --------->bZIP60(1)                                                           --------->ANAC55(2)                                                           <---------ANAC55(1)                                                           <---------ANAC55(2)                                                           <---------ANAC58                                                           <---------TGA1a                                                           --------->TGA1a                                                           <---------O2  <------------CBF                                         <---------ANAC46 --------->ATHB12                             *TSS    --------->At4g35610                          -- --------->ATHB51                       ------>ZmHOX2a(2)  <---------ANAC58                        -- ---------YAB1                        --------->ARR11(3)   ==========================bZIP_DOF      -- ------>ANAC55(2)                     <---------ARR11(3)  ----------->STF1                     <----- -------ANAC55(2)      --------->ATHB12<------ZmHOX2a(2) <---------TGA2(2)           ------->TEIL<--- ----TEIL             <---------YAB1  <---------ARR14(2)----------->HVH21 <----------DOF2   <-------- -DOF2     <-----------GT1            --------->ARR14(2)----------->TGA1 --------->TOE2(3) --------->AHL20(2)   acataattgaatttatccatagaaatgatagagactcgaagatcggacataaaacttgctgacgtgacacccatacctttgtgtctgtatgtattatata  16945000                                                                                                -----                                                                                              ------- ------->ANAC58                                                                               ------- ------->ANAC58                                                                             <-------- ------->ANAC46                                                                         <----------DOF2 ----AHL20(2)          <-----------ARR10        ---------->DOF2    ----------->GT1--------->AtMYB61 --------GT1           --------->GLK1(2)      <---------HSFB2a(2) <-----------------------TaNAC69(2) -AHL20(2) --------->MYB52(1)        ---------->DOF2       ---------->DOF2       --------->MYB46(3)   aacgctatagaactaagagaagaagtatctaagtagcatcaaagcattctaaaagaagtttcaaagaagaagtgaaaatggaaaccactgcttttaacac  16945100                                                         <----------DOF2                                                      <---------ARR11(3)                                                      <---------AGP1                                                      --------->ARR11(3)    --------->ANAC58                                  <---------ARR14(2)    --------->ANAC58            <-----------GT1       --------->ARR14(2)       --------->ANAC46 ---->ANAC46          <---------At4g35610         ------->MYC3              ------>MYB83         ---- -->ANAC46          <---------WRKY38(1)           <-------MYC3      --------->WOX13(1)           <--- -->ZAT6            <---------WRKY12  --------->AtMYB61 ------>ZmHOX2a(2)   ------>MYB46(1)  <------- ---GT1           <-----------HVH21<---------ALFIN1  <---------CCA1(2)      -------->P      <--------   aacatcacgaattggaaactggtcatcggctatttctccacctctacaaacatgtggatctttcaagtgccaattaccaacacgaagaggtgttattgta  16945200  Previous    Next  AGI:  At4g35760.1    Description:  electron carrier/ protein disulfide oxidoreductase. similar to hypothetical protein [Vitis vinifera] (GB:CAN72958.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Vitamin K epoxide reductase (InterPro:IPR012932) Range:  from: 16942326    to: 16944682    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g35770.1    Description:  SEN1 (DARK INDUCIBLE 1). similar to STR16 (SULFURTRANSFERASE PROTEIN 16) [Arabidopsis thaliana] (TAIR:AT5G66040.1); similar to din1 [Raphanus sativus] (GB:BAA20356.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 16944946    to: 16946197    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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