Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------TOE2(3)                                        --------->YAB1                      ----------->GT1   -------->HAHB4                             <-----------RAV1(1)                     ----------->GT1   <---------YAB1                          <---------ANAC58                     <---------YAB1   <---------TOE2(3)                        <---------ANAC58           --------->ZAT14       ----------->GT1                              --------->ATHB12           --------->REM1(2)    <---------TOE2(3)            <----------DOF2<---------WOX13(1)           <---------ZAT14      --------->DAG2          --------->GLK1(1) --------->ATHB12          --------->ALFIN1    ---------->DOF2 <------ZmHOX2a(1)         --------->At5g28300   tattggtgaagagtgtagagaagatgataaaaaaaaggttaatgataaggaaactgagaaacccttttaaacacagtgattgattgtgttggaatcgaag  16908100                              ----------->GT1                                   --------->AtLEC2                 ---------->DOF2                                              <---------ANAC58               --------->CCA1(2)       --------->ZAT14                   --------->HSFB2a(1)            ----------->GT1  --------->DAG2                              <---------HSFB2a(1)          ---------->DOF2   ---------->DOF2                  <-----------------AG         --------->At4g35610 ----------->RAV1(1) ------------------------>ANAC81       ------>ZmHOX2a(1)  <---------ANAC58<------   tagcgacagtcaaaaagataaaagaaaaaaaaaagtaaaactgaagtcttgtgtttctgtcctcactgttttggaatgtttcatgcgaaatcagatgtgg  16908200                                    <---------MYB52(1)                                <---------At5g28300                            --------->ALFIN1                          <---------ANAC46                        --------->AtMYB61                          <---------ANAC58                     <---------ALFIN1                          <---------ANAC58                     --------->AtMYB61                          <---------ANAC55(1)                 --------->MYB46(3)                  ---                          <---------ANAC55(2)     <---------ARR11(3)          <---------ARR14(2)  <--          <---------At4g35610 ----------->HVH21   --------->ARR11(3)          --------->GLK1(2) ----- ---AtMYB61      <---------ANAC46  --------->At5g28300      --------->AtMYB61 --------->ARR14(2)<----   tctctctctctctgctcttgtttgtaatgcgtgtgaccgtgattcagtccaagttcttaataccaccaccattgcaagagaatccaaaactatttggaag  16908300                                 --------->ANAC58                          <--------------OsCBT                         ------->TEIL --------->ALFIN1             <-----------GT1 <---------ALFIN1      <<<<<<<<<GATA-1    --------->SPL7  <----------DOF2    <---------------AtSPL8  ------>ZmHOX2a(1)  --------------->AtSPL8 --------->TOE2(3)   --------------->AtSPL3                   --------->AHL20(2)  --------->YAB1    < ------>ARR14(2)     <---------------AtSPL3 --------->DOF5.7(2)                  <---------YAB1<----- -------ARR14(2)--------------------->WRI1<---------ANAC46    *TSS             --------->YAB1 <------ ---->HSFC1(2)  <----------DOF2  --------->ANAC46         --------->REM1(1)   <---------AHL20(2)    - -----HSFC1(2)  --------->TOE2(3)--------->ANAC58<----------DOF2        <----------DOF2 ------------>CBF   tatcctttatctatattactttaaacgtaccacacacgaagtggacgtgaactttaggctacaataaaacatttctttatattatcataaaacaattttc  16908400                <---------YAB1                   --------->AHL20(2)               <---------AHL20(2)                <---------AHL20(2)             <---------AHL20(2)                 <---------AHL20(1)             <---------YAB1                     --------->AHL20(2)    <---------YAB1          <---------ARR11(3)           <---------WOX13(1)         --------->DAG2          --------->AHL20(2)          <------------CBF           ---------->DOF2       --------->AHL20(2)    <-----------GT1                  -------->HAHB4   <---------AHL20(2)       ---------->DOF2 ---------AHL20(2)                   --------->ATHB12<---------AHL20(2)  <---------WOX13(1) ----YAB1 <---------AHL20(1)        <---------YAB1   --------->AHL20(2) <------------CBF -----GT1 --------->AHL20(1)        --------->ICU4   <---------AHL20(1)--------->ATHB12<---------AHL20(2) -------->AHL20(2)              --------->AHL20(2)--------->AHL20(2)<---------At4g35610--------->AHL20(1)   atttttttacaaaatattattttagaaattacaaaaaaatgattgaacaaaataattttttttggaataaagctgattggccaaagaaataaaataaaac  16908500                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                        *TSS                                              <---------------AGL15<-----                 <---------ANAC46                                        ----------------->AGL2<-----            --------->ANAC46                      <---------MYB52(1)    --------->At4g35610   -------         --------->ARR14(2)                     --------->MYB52(2)---------->DOF2        <---------ANAC58         <---------ARR14(2)        --------->ANAC58           --------->TOE1(3)          <---------ANAC46 ---------->DOF2 <---------AtLEC2  --------->ANAC58           --------->TOE2(3)          <---------ANAC58   tgacaaaggcataaacgctgcatgtaaatcgccgaaaacgaaatcgaccttcgttgctctgaaaccctaaaagaagctaaatctagcaatggcgagaaga  16908600                                   ------>ZmHOX2a(1)                                ------>ZmHOX2a(1) <---------MYB52(1)         <-----------ARR10 --->ZmHOX2a(2)             --------->ARR14(2) -----TEIL--------->AHL20(2)<---------ARR14(2)                        ------>MYB46(1) ---ZmHOX2a(2)              <---------ARR11(1)                        -------->P                   -- ----->ARR14(1)             --------->GLK1(2)               <------ZmHOX2a(2)                <------- -----ARR14(2)             <---------ARR14(1)              --------->ARR14(2)                -------- ---->ARR14(2)           <---------ANAC58       <---------ZAT14       ------>MYB83           -------- ---->ARR11(3)           <---------ANAC58     --------->ANAC46--------->WOX13(1)             <------- -----ARR11(3)      ----------->RAV1(2)   --------->AtLEC2 <---------ARR14(2)            --------->ALFIN1 ----HSFB2a(1)    <---------DAG2===================================HOX2a_HOX2a      --------->LBD16-- ----GLK1(1)      <----------DOF2  ================================HOX2a_HOX2a----------->ARR10    -- ---->ARR10<---------AHL20(2)--------->HSFB2a(1)--------->ZAT14<-----------HVH21  <---------LBD16  <-   tccgtttcgatatttaatcgccttctggcgaatcctccttctccattcacatcactgtcccgatccatcacctacatgcctagacccggagatggagctc  16908700                                                                                        <---------ZAT18                            --------->ARR14(2)                                          <---------ZAT14                         --------->ANAC58                                               --------->ZAT14                         --------->ANAC58                                          <------NtERF2                        <------NtERF2                                            --------->ANAC46                       <---------ATERF1(1)                                       --------->ANAC58                      <---------DEAR3(1)                                         --------->ANAC58                      ----------->HVH21                        --------->WRKY18(1)------>NtERF2         --------->ZAT6------>NtERF2                  --------->ALFIN1          <-------PIF4    --------->TOE1(3) --------->DEAR3(1)           <---------DEAR3(1)           ------->MYC3    --------->TOE2(3)<------NtERF2                 <---------AtMYB61            <-------MYC3  ------->TEIL       --------->RAP2.3(1)           --------->ALFIN1             ------->PIF5 ------->ANAC46     ------>NtERF2                 <---------ZAT14               <-------PIF5 --At4g35610        --------->LBD16               --------->ZAT14               ------->MYC2 ->At4g35610        <---------ATERF1(1)           --------->ABI4(2)             <-------MYC2        - ->GLK1(1)--------->TOE2(3) <---------GLK1(2)     --------->SPL7                ------->PIF4        - --GLK1(1)--------->TOE1(3) <---------ARR14(2)    <---------ABI4(1)            --------->ANAC58     < ------->ANAC58    --------->LBD16               --------->ALFIN1              --------->ANAC46    -- ------->ANAC58    <---------LBD16        ----------->HVH21   <-----------HVH21--------->ANAC58------ --------MYB52(2) <---------LBD16    <----------DOF2<---------ANAC46          ------->TEIL     <-----   cacgaaccgtaaccctaattcccggcgacggaatcggacctttggtgaccggtgcggtggaacaggtcatggaagcgatgcacgcgccagtgcatttcga  16908800           <---------HSFB2a(2)           <---------HSFC1(1)           --------->HSFB2a(2)           --------->HSFC1(1)           >>>>>>>ZML2        --------->GLK1(2)        <---------ARR14(2)   <---------TOE1(1)   <---------TOE2(1)                                                                                <  <-------TEIL                                                                                      < --------->CCA1(2)                                                                                  < -------->ARR14(2)                                                                                 <- -------->ARR11(1)                                        ----------->GT1                          -- ---------ARR14(2)                                    --------->REM1(2)                            <- ------->CCA1(2)         ---------->DOF2              --------->ZAT14                             <-- --->HSFB2a(2)     --------->TOE1(2)                  <---------ZAT14       ---------->DOF2     ----- ----HSFB2a(2)<------ZmHOX2a(1)              ------>ZmHOX2a(2)          ---------->ID1          <----   gagatacgaggttctaggaaacatgagaaaagtccctgaagaagtgatcgagtctgtgaagagaaacaaggtttgtctcaaaggtggattagcgactcct  16908900                                                                                                -----                                                                                                -----                                                                                                -----         <-----------HVH21                                                                      -----      <---------ANAC58                                                                        -------      <---------ANAC58                                                                        <------    <------NtERF2                                                                             <------   <---------MYB46(3)                                                                         -------  <---------ANAC46                                                                            <------  --------->ALFIN1                              --------->ARR11(3)                            <------ ---------MYB46(3)                              <-----------ARR10                             ------- ------MYB83                                    --------->ARR14(2)                            <------ ------MYB46(1)                                 <---------ARR11(3)                            ------- --------MYB46(3)                              <---------GLK1(1)                              ------- ------->MYB55(2)                              <---------CCA1(2)                              ------- --------AtMYB61                        --------->ARR11(3)                                 ---------- ------P--------->ALFIN1            ---------->DOF2                                        ---------- ->ZmHOX2a(1)                      <------ZmHOX2a(1)                               --------->LBD16 -------RAV1(1)  <----------DOF2 <---------TOE2(3)                                <---------LBD16----   gttggtgggggtgtcagttctttgaatatgcaattgaggaaagaactcgatatcttcgcttctcttgtcaattgcatcaatgtccctggattagtgacgc  16909000  Previous    Next  AGI:  At4g35640.1    Description:  ATSERAT3;2 (SERINE ACETYLTRANSFERASE 3;2); acetyltransferase/ serine O-acetyltransferase. Identical to Serine acetyltransferase 4 (SAT4) [Arabidopsis Thaliana] (GB:Q8W2B8;GB:O81795); similar to AtSerat3,1 (SERINE ACETYLTRANSFERASE-106), acetyltransferase/ serine O-acetyltransferase [Arabidopsis thaliana] (TAIR:AT2G17640.1); similar to Putative serine acetyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAN05506.1); similar to Os03g0133900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048879.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Serine acetyltransfe Range:  from: 16905584    to: 16908362    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g35650.1    Description:  isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative. Identical to Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial precursor (IDH3) [Arabidopsis Thaliana] (GB:O81796); similar to IDH1 (ISOCITRATE DEHYDROGENASE 1), isocitrate dehydrogenase (NAD+) [Arabidopsis thaliana] (TAIR:AT4G35260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23279.1); contains InterPro domain Isocitrate/isopropylmalate dehydrogenase; (InterPro:IPR001804); contains InterPro domain Isocitrate dehydrogenase NAD-dependent, mitochondrial; (InterPro:IPR004434) Range:  from: 16908524    to: 16910195    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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