Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->TOE1(2)                                                         --------->ZAT2                ----------->GT1                                                         <---------ZAT2   --------->MYB52(1)                                                         <---------At4g35610   <---------------AtSPL8                             <---------HSFB2a(2)         --------->At4g35610   <------ZmHOX2a(1)                             --------->HSFB2a(2)      ---------->DOF2   <---------MYB52(2)       <--- --------------AGL15       <---------REM1(1)    --------->REM1(1)----------->GT1   <-------TEIL  ----   actaatatgggtttgttttacagagaatgttgtagaagaatggtgagactacatcagaaagctgggactgataaactaacaggagtacatagaaaataca  16903700                                                    <-----------HVH21                                               <---------ANAC58                                               <---------ANAC58               <-------TEIL             <---------ZAT18             --------->ARR14(2)        <---------ALFIN1   --------->GLK1(2)             <---------ARR14(2)       --------->ZAT14    <---------ARR14(2)       <---------ARR14(2)             --------->At4g35610--------->ARR14(2)       --------->ARR14(2)          --------->At4g35610   <---------GLK1(2)   ----------------->AGL2         ------->TEIL <---------ANAC46   ---------->DOF2  ------>ZmHOX2a(1)      ---------->DOF2<XXXXXXXXXXXXXXXXXXXMIR156A-F    ----------->GT1 ------At4g35610      ----------->RAV1(1)   <----------DOF2   --------->ZAT6                     ---- ----->At4g35610     <----------ID1<---------At4g35610  <---------At4g35610              <---------ANAC46   gctcctccaaattcggatacatagcaacaaagtatgaagctgcacactttcttgtgtcagattctcactaaagagtggaaaatagtagtttgtgtatagc  16903800                                                                                               <-----                                    --------->ANAC46                                           ------                                    --------->ANAC58                  ----------->GT1<----------DOF2                                    --------->ANAC58                 ------>ZmHOX2a(2)        <------  --------->At4g35610     <---------AHL20(2)              <---------At4g35610       <----------------  <---------At4g35610     --------->AHL20(2)              ==================HOX2a_HOX2a<---------AHL20(2) ----->ZAT18<-----------GT1       --------->MYB52(1)      ------>ZmHOX2a(1)      <----------DOF2    -   tcgctgctaacattttccctctcaatttttaattacaaacgaaataagttcaaaacattcctctgatttgatctgtaacaagtctttcttttattgatat  16903900       <---------AHL20(2)      <---------AHL20(1)      --------->YAB1      --------->AHL20(2) ----ARR11(3)            --------->YAB1            <-------TEIL --->ARR11(3)          ------>MYB46(1)           <---------GLK1(2)                    --------->ATHB12 ---GLK1(1)            ------>MYB83         <-----------GT1               <------ZmHOX2a(1) -AGL3<---------AHL20(2)<---------ATHB12 --------->YAB1                 <---------TOE2(3)        <--- -------->ANAC46      --------->WOX13(1) <---------ICU4             --------->CCA1(2)<---------YAB1   ctcagcaataaaattctcttataccaatcatattttttgtcaatagttacagattcatagaatatgtatgatataaggatgagagttttgatttgaactc  16904000                                                                                 --------->ZAT6                                                                               --------->MYB52(1)                                                                               ------>MYB46(1)                                                                               ------>MYB83                                                                              --------->MYB55(1)                                                                             <---------MYB52(2)                                                                             <---------MYB59                                                                    --------------->AtSPL8                   --------->AHL20(2)                    --------->ZAT14     <---------MYB55(2)              --------->AHL20(2)                         --------->At4g35610 <---------MYB111(1)            --------->TOE2(3)                            --------->LBD16     <---------MYB46(2)            --------->TOE1(3)                           --------->DEAR3(1)   <---------MYB111(2)        --------->REM1(1)                              --------->ANAC46      --------->AtMYB61      <---------HSFB2a(2)                            <---------ALFIN1     <---------ALFIN1      --------->HSFB2a(2) <------------CBF    --------->ZAT14   *TSS<---------------AtSPL8 -------DOF2<----------DOF2               <-----------GT1<---------At4g35610--------->ANAC46   tttttcttctacaactttaaataaaacacattggaaatgagtcttaactatactaacaccgcagacaaaactagtaccacctaacacaaacgctgtcgtt  16904100                                       <---------RVE1(1)                                       <------ZmHOX2a(2)                          ------>MYB83<---------ARR14(2)                          ------>MYB46(1)                          -------->P  --------->ARR11(3)                        <---------MYB111(1)                        --------->AtMYB61                        <---------ALFIN1------>ZmHOX2a(2)               --------->ARR11(3)     <---------AGP1               <---------ARR11(3)     --------->AGP1              <---------CCA1(2)       --------->ARR14(2)          <---------AHL20(2)         <---------CCA1(2)                 ------->GAMYB          --------->AHL20(2)  <----------DOF2                       ----------->RAV1(1)      --------->REM1(1) <---------MYB111(2)                   --------->DAG2     <-------TEIL       --------->MYB46(3)             --------->DAG2 <---------MYB52(2) --------->ANAC46       <---------MYB55(2)            ---------->DOF2 --------->MYB46(3)   <---------GLK1(2) --------->ANAC58      --------->MYB46(3)<----------DOF2     ---------->DOF2         <---------LBD16 --------->ANAC58   --------->MYB46(3)<---------ARR11(3)  <----------ID1      --------->YAB1---------   ttcaagctacatttatatatctcccaccaactctttctcagatcttttgtctaagtaaaagcgaaaagggcaacaaacaaaaataaactcggagaatctc  16904200             <---------ARR14(2)             --------->ARR14(2)            --------->ATERF1(1)            <------NtERF2            --------->At4g35610            <---------At4g35610           <<<<<<<<<AtERF-5           <---------ERF1           <---------ATERF1(1)           <---------RAP2.3(1)           ------>NtERF2           <<<<<<<<<AtERF-2           <<<<<<<<<AtERF-3           <<<<<<<<<AtERF-4           <<<<<<<<<AtERF-1           <---------MYB46(3)          <---------RAP2.3(3)          <---------ANAC46          <---------RAP2.6(2)          <---------RAP2.3(2)          <---------DEAR3(1)     <---------ICU4                         --------->MYB46(3)     --------->YAB1                         --------->REM1(1)     <------------ATHB5                --------->ANAC58    --------->ICU4                     --------->ANAC58    ------>ZmHOX2a(1)    <---------ATHB12               --------->ETT(1)    --------->GLK1(2)         --------->At4g35610  --------->YAB1                 <-----------HVH21    <---------GLK1(2)     <---------ICU4  --------->WOX13(1)          <---------ANAC58       <---------At4g35610    --------->YAB1------>ZmHOX2a(1) --------->MYB46(3)       <----------DOF2 ----------->RAV1(1) <----------DOF2  <---------ICU4     <-- >GLK1(2)--------->RAP2.6(3)  <---------ANAC58       --------->At4g35610   <---------ATHB12       ---   acaacaatcatggcggctacgacgaactctttccttgtcggaagcaacaacactcagattcctgctttgaaacccaaatcatcatctcaatcctttcttc  16904300                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                                  ---                   <---------WRKY12                                                             <----                  --------->DOF5.7(2)                     <---------ANAC58                      -----                  <---------MYB52(1)                  <---------At4g35610                      ------             <---------ALFIN1                 <---------DEAR3(1)<----------DOF2                <-----            --------->MYB46(3)         --------->ANAC58   <---------ANAC58                     ------            <---------MYB55(2)         ------>MYB83  --------->MYB52(2)                       -------           ------>MYB83       <---------At4g35610  <---------MYB52(1)                         -------           ------>MYB46(1)    --------->At4g35610 <-----------HVH21                           -------   --------->At4g35610    <-----------HVH21 <-----------HVH21 <---------DEAR3(2)              <------   <---------At4g35610    <-----------TGA1 --------->ANAC46<-----------HVH21                  ------- -------At4g35610<-----------HVH21     ------>MYB46(1)--------->At4g35610                   --------- ------>ANAC46  --------->DEAR3(1)     --------->ANAC58  <-------TEIL--------->MYB46(3)     ---------   acctcagcaaaccaaacaccgtcaacttcgtcagcaaaaccaagcccgtcgctgttagatgcgtcgcttcaacgactcaagttcaagatggagttagatc  16904400                                                <---------ALFIN1                                             --------->ANAC58          <------ZmHOX2a(2)                  --------->ANAC58     <---------MYB52(1)                  --------->TCP20    <-----------HVH21                    <---------PCF2  <------NtERF2                          --------->ARR14(2)  --------->ATERF1(1)                    <---------ARR14(2) ------>NtERF2                          --------->ATERF1(1) <---------ATERF1(1)                    <------NtERF2                                  <------ZmHOX2a(2) ---------ARR14(2)                     ------>NtERF2                                  <---------ARR11(1) -------->ARR14(2)                     <---------MYB46(3)                             --------->ARR11(3) ------->ATERF1(1)                     --------->MYB55(2)                             <---------ARR11(3) -------ATERF1(1)                      --------->ABI4(2)                              <---------ARR14(2) ------>LBD16                          <---------ATERF1(1)                            --------->GLK1(2) -----LBD16------>ZmHOX2a(2)           <---------DEAR3(2)                ---------->DOF2            < ->ZmHOX2a(2)                         <---------ANAC58          --------->KAN4(2)     --------->ARR14(2) --->ARR14(1)                         <---------ANAC58         --------->KAN4(1)      <---------AGP1< -ZmHOX2a(2)        ------->MYC3      <---------ANAC46         <---------HSFB2a(1)    <-----------ARR10 --->CCA1(2)        ------->MYC2      <---------DEAR3(1)       <---------KAN4(1)     <---------CCA1(2) -->AGP1 <---------ARR14(2)          --------->ATERF1(1)       <---------HSFC1(2)    <------NtERF2  < -->ARR11(3)        <-------MYC2     <------NtERF2             --------->HSFC1(2)    <---------ARR14(1) -->ARR14(2)        <-------MYC3     ------>NtERF2             --------->HSFB2a(1)<---------LBD16---- ---ARR14(2)       <---------ANAC58<---------DEAR3(1)         <---------KAN4(2)<-----------RAV1(2)  < -->ARR11(1)       <---------ANAC58<---------RAP2.3(2) <---------ANAC58========================HOX2a_HOX2a -->ARR10--------->ARR14(2)        <---------RAP2.6(2) <---------ANAC58------>ZmHOX2a(1)------>ZmHOX2a(2) >MYB59<---------DEAR3(2)         <---------LBD16  <----------DOF2     =======================HOX2a_HOX2a   cggctccgtcggatcccaagaacgtgtcttcaacttcgcggcgggtccagccactttgcctgagaacgttctcctaaaagctcaggcggatctatacaac  16904500                                                                                              -------                                                                                              <------                                                                                          <---------GLK1(2)                                                                                         --------->At4g35610                                                                                         <---------ZAT2                                                                                      <---------MYB52(1)                                                                                     <-----------TGA1                                                                                     <-----------HVH21                                                                                 ====================                                                                                --------->HSFB2a(1)                                                                                <------ZmHOX2a(2)                                                                                =====================           <---------ANAC58                                                     <---------HSFB2a(1)       ------>ZmHOX2a(2)                                                        =====================     <---------ARR14(2)                                                         <---------GLK1(1)     --------->ARR11(3)                                                         --------->GLK1(1)     <---------AGP1                                                            --------->ARR11(3)     --------->ARR14(2)                                                        <---------ARR14(2)    <---------CCA1(2)                                                          <---------ARR11(3)   ----------->ARR10                                                           <-----------ARR10  <------NtERF2                                                                --------->ARR14(2)  --------->ALFIN1                                                             <---------ARR11(1)   - ---------ANAC46                                                              <---------CCA1(2)     < ---------ANAC58                          ---------->DOF2            --------->At4g35610 <---------At4g35610 ---------bZIP60(2)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------ARR14(1)    - --->GAMYB <---------ANAC58    <-----------HVH21                   --------->DAG2------>ZmHOX2a(2) <- ---------ANAC58          <---------At4g35610                     ---------->DOF2====================   tggcgtggatctggcatgagtgtgatggagatgagtcacagaggcaaagagtttctctcgattatacaaaaagctgaatcggatcttcgtcagcttctcg  16904600  Previous    Next  AGI:  At4g35620.1    Description:  CYCB2;2 (CYCLIN B2;2); cyclin-dependent protein kinase regulator. Identical to Cyclin-B2-2 (CYCB2-2) [Arabidopsis Thaliana] (GB:Q39070;GB:O81794); similar to CYCB2,1 (CYCLIN B2,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT2G17620.1); similar to G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (GB:P46278); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR00436 Range:  from: 16901626    to: 16903925    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g35630.1    Description:  PSAT (phosphoserine aminotransferase); phosphoserine transaminase. Identical to Phosphoserine aminotransferase, chloroplast precursor [Arabidopsis Thaliana] (GB:Q96255); similar to phosphoserine aminotransferase, putative [Arabidopsis thaliana] (TAIR:AT2G17630.1); similar to Phosphoserine aminotransferase, chloroplast precursor (Phosphohydroxythreonine aminotransferase) (PSAT) (GB:P52877); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Phosphoserine aminotransferase; (InterPro:IPR003248); contains InterPro domain Pyridoxal phosphate-dependent transferase, major Range:  from: 16904064    to: 16905727    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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