Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ANAC46                                           --------->ANAC58                                           --------->ANAC58                                         --------->AtMYB61      ---------->DOF2                    ----------->RAV1(1)               ---------->DOF2    --------->ANAC46                  <-----------GT1       --------->AHL20(2)                 <-----  --------->ANAC46                  --------->AHL20(2)      <---------AHL20(2)       ------>ZmHOX2a(1) ------GT1     >>>>>>>>>TBF1     --------->WOX13(1)--------->GLK1(2)<---------ICU4   <----------DOF2   ccatacaccaaagtgaagaagaatcactaaaaaatcaattaaaccacacaaaaattctgaatttttttaaaaatttcaaaaggagtcctttttttatctt  16876900                                                               <---------At4g35610                                                               --------->ZAT14                                                       ------>ZmHOX2a(2)                                                     <---------ARR14(2)                                                     <---------ARR14(3)                                                     --------->ARR11(3)                                                     --------->ARR14(2)                                                     --------->AGP1                                                     <---------AGP1                                                     <---------ARR11(3)                                                     --------->ARR14(3)                                     ========================HOX2a_HOX2a                                     =========================HOX2a_HOX2a         <---------At4g35610                         --------->ATHB12     --------->TOE1(2)<---------ZAT14    --------->At4g35610 -----DOF2   >>>>>>>>>TBF1           <------ZmHOX2a(1)<------ZmHOX2a(2)          ------->TEIL   tagatgaacagagaagaagaaactaaatgatagaagaaaggatagaaacctgcaagatcttgttgagcagtgagagttttatgcatctcaacaagacgct  16877000                                                                                              ------>NtERF2                                                                                              <------                                                                                             >>>>>>>>                                                                                             --------                                                                                             --------                                                                                             >>>>>>>>                                                                                             --------                                                                                             >>>>>>>>                                                                                             >>>>>>>>                                                                                             >>>>>>>>                                                                                             --------                                                                                             >>>>>>>>                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <------NtERF2                                                                                            ---------                                                                                           <---------ATERF1(1)                                                                                           --------->ZAT2                                                                                           <---------RAP2.3(1)                                                                                           --------->At4g35610                                                                                           ------>NtERF2                                                                                           <---------At4g35610                                                                                           --------->ABI4(2)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                         --------->ATERF1(1)                                                                                        --------->LBD16                                                                                       <---------DEAR3(1)                                                                                      <------NtERF2                                                                                      --------->RAP2.3(1)                                                                                      --------->ATERF1(1)                                                                                      <---------LBD16                                                                                     <---------RRTF1(1)                                                                                     ------>NtERF2                                                                                     <---------RAP2.3(1)                                                                                     <---------RAP2.6(1)                                                                                    <---------DEAR3(1)                                                                                    --------->DEAR3(1)                                                                                   --------->RAP2.3(1)                                                                                   --------->RAP2.6(1)                   --------->WOX13(1)                                              --------->ATERF1(1)          --------->At5g28300                                                      --------->RRTF1(1)          <---------RAP2.6(3)                                                      --------->ERF1          --------->LBD16                                                         ------>NtERF2         <---------ANAC46                                                         <---------ATERF1(1)         ----------->GT1                                                          <---------RAP2.3(1)         <---------ANAC55(2)                                                      --------->LBD16         <---------ANAC58                                                       <---------LBD16<-----         --------------->AGL15                                                 ======================         <---------ANAC58                                                   ------>ZmHOX2a(1)--------         <---------------AGL15                                         --------->KAN4(2)<---------ATERF1(1)        ----------------->AGL2                                       <-------TEIL--------->ANAC46        <-----------------------TaNAC69(2)                           ------->TEIL<---------DEAR3(1)        <-----------------AGL3                                    <---------ANAC55(2)<---------ERF1 <        <------NtERF2                                             --------->ANAC55(2)<---------ATERF1(1)        ----------------->AGL3        <-------TEIL            <-----------HVH21------>ZmHOX2a(1)  ---       ------>NtERF2          ------>ZmHOX2a(1)      <-----------HVH21--------->HSFB2a(1)<------NtERF2   <-----------RAV1(1)        --------->LBD16<---------At4g35610 --------------->AtSPL3--------->DEAR3(1)   cacaaatggtgccgtaaatagcaatctgtttcctgagagtttcatactgctcatcggtcatcaccttcacgtacattcctcctccggcgccggagccgcc  16877100       --------->ARR14(2) <---------TOE2(3) ---RAP2.6(3) >AtERF-3 ->DEAR3(1) ->RAP2.3(2) >AtERF-4 ->RAP2.6(2) >AtERF-5 >AtERF-1 >AtERF-7 ->ANAC58 >AtERF-2 ->ATERF1(2) ->ANAC46 ->ANAC58 ->RAP2.3(3) ->DREB2C(2) ->RRTF1(3) >RAP2.3(1) >ORA47(2) >ERF1 <---------ARR14(2) >RRTF1(1)                                 <---------MYB46(3) >ATERF1(1)                                <---------REM1(1)                                     <--- >DEAR3(2)                               <-------GAMYB                                           ---- -NtERF2<------ZmHOX2a(2)          --------->ATHB12                                             ----- ==============HOX2a_HOX2a        <---------YAB1                                                <---- ->RRTF1(2)                      <-------GAMYB --------->At4g35610      <----------DOF2     <-------- ---------DOF5.7(2)             <---------MYB46(3)                  <---------CCA1(2)     <---------- ------>DOF5.7(2)              <---------YAB1  <---------At4g35610<---------ICU4 <---------GLK1(2)   attaacgtcgatcccttgaagattagaagagtgatggttattgggttgtagctgattatcccattccatcatctcttttgtcagaatttcgctcagaaga  16877200     <----------DOF2 ------GLK1(1)                                      --------->LBD16 ----->GLK1(1)                                     --------->HSFB2a(2) ---->ARR11(3)                                    <---------LBD16                 <------ZmHOX2a(1) -----ARR11(3)                               <---------DAG2          ---------->DOF2 -At4g35610                       ---------->DOF2<---------LBD16 --------->DAG2  <----------ID1    <- -RAV1(2)           --------->TOE1(2)        <----------DOF2   ---------->DOF2---------->DOF2--------   tttctctctttctctgtgtgaacgaaggaaacagagcaaagtcagtgctttttcgggagtagaaggaaaggtaaaggcagaaaaggacaaaaaaaactta  16877300                                   --------->AHL20(1)                                   <---------AHL20(2)                                   <---------AHL20(1)                                   --------->ARR11(3)                                <----------DOF2                                --------->YAB1                                   <---------GLK1(2)  <                                --------->AHL20(2)                              <---------ICU4    <--                               <---------YAB1                                   -------->HAHB4    ---                              <---------AHL20(2)                                <--------ATHB1  -----           *TSS               --------->AHL20(1)                               --------->ICU4  ------       <---------YAB1         --------->AHL20(2)                               <---------ATHB12------ <---------TOE2(3)           --------->YAB1               <----------ID1       <---------YAB1<------- --------AHL20(2)    <------------CBF             ---------->DOF2          --------->At5g28300------- ->TOE2(3)<----------DOF2   --------->ICU4 <-------TEIL ---------->DOF2   ----------->GT1------------   atttatgttattcttttgttctatattgaaattataatatatagtttcattacaaaggaaaagacaaataagaagacggtaatgattctttgacaatcgt  16877400                                 --------------->AGL15                                 <---------------AGL15                                 <---------MYB59                                <-----------------AG                                <-----------------AGL3                        <---------YAB1                     <---------MYB52(1)         <---------At5g28300 ---------TOE2(3)   --------->At5g28300        <---------WRKY18(1) -------DOF5.7(2)  ----------->GT1             <-----------GT1 ------->DOF2    ------>MYB83   ----------------->AGL1                                              < ---->DOF5.7(2)  ------>MYB46(1)<-----------------AGL1                                              < --->TOE1(3)    --------->MYB52(1)------>ZmHOX2a(1)                                              <--- --->TOE2(3)   ------->GAMYB    ----------------->AGL2                --------->At5g28300<---------ARR14(2) --ATHB12     <---------MYB52(2)----------------->AGL3               ----------->GT1     --------->ARR14(2) -->YAB1      --------->MYB46(3)<-----------------AGL2  <---------TOE2(3)                <---------ARR11(3) >CBF       <-----------GT1     ----------------->AG<---------MYB52(1)<-------GAMYB     <---------CCA1(2)   taaaggaaactatttaaccaacggttattttagttcctaatttggaaattgaccgtttgagatttcacatacggttaaacggctacttccatatctgaat  16877500              --------->TOE2(3)        --------->TOE2(3)                                     <---------AHL20(2)        --------->YAB1                                   --------->AHL20(2)       <---------YAB1                                    <---------AHL20(1) ---------AHL20(2)               <---------YAB1          <---------AHL20(2)     <---------HSFB2a(2) -----------GT1           <---------AHL20(2)     <---------MYB52(1)     <-----------GT1 ------ICU4 --------->GLK1(2)<---------WOX13(1)<---------MYB46(3)<---------TOE2(3)   atttacattaccataatctaaatgttatttgatttatagttggagagagccgttgctattttattttatggaaataacatgtctggatgcaatcgacttg  16877600                                                                          <----------DOF2                                                                          <---------DAG2                                                                     <------MYB46(1)                                                                     <------MYB83                                                                    --------------->AtSPL8                                                                    --------->MYB111(2)                                                                    <---------------AtSPL8                                                                    <---------MYB46(3)                                                                    --------->MYB46(2)                                                                    --------->MYB111(1)                                                                   <---------MYB55(1)                                                                   <--------P                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                  <-------GAMYB                                                                 --------->MYB55(2)                                                                 <------MYB83   --------->ANAC46                                                                 <---------DEAR3(2)                                                                 <------MYB46(1)--------->ANAC58                                                                 <---------MYB46(3)                                                                 --------->MYB52(2)                                                                <---------TOE2(2)                                                                <---------TOE1(2)                               <---------ATHB12                 <---------AtMYB61             <------                             --------->WOX13(1)       <---------YAB1--------->MYB59           <------                 --------------------->WRI1  --------->MYB52(2)<---------MYB52(1)          <---------        <-----------GT1------>ZmHOX2a(2)   <---------MYB52(1)<---------MYB46(3) --------->ANAC58  <--   atacaaatattaacagctagtttgatcgtatcaatgaagtagattgttagtttttttttatagtcgttggttggtacttttcaagaaactgaattacttt  16877700                                                                                                    -                                                                                                   -- <----------DOF2                                      ---------->ID1                              <<< ---DAG2                  --------->ANAC55(2)        <-----------GT1                            <---- ----DOF2                 <---------ANAC55(2) --------->DAG2   <----------DOF2                  <---- --GT1   <---------ARR11(3)  ------->TEIL    ---------->DOF2<---------YAB1             <---------AHL20(2) ---------GT1            --------->MYB59 --------->ANAC46------>ZmHOX2a(1)      <---------ZAT6 ------   tttcttttcaatatccattcttcaagttatgtattttgtttacaccgaaaagttttttccttatgcttttttagtccaatttgtgttatatttttgggtc  16877800  Previous    Next  AGI:  At4g35550.1    Description:  HB-4/WOX13 (WUSCHEL-RELATED HOMEOBOX 13); DNA binding / transcription factor. Identical to WUSCHEL-related homeobox 13 (WOX13) [Arabidopsis Thaliana] (GB:O81788); similar to WOX14 (WUSCHEL RELATED HOMEOBOX 14), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G20700.1); similar to homeodomain protein HB2 [Populus tomentosa] (GB:AAR83341.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 16875526    to: 16877311    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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