Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <------ZmHOX2a(2)                                   --------->ARR11(3)                                   <---------ARR11(3)                               --------->YAB1                               ---------->DOF2                              <---------ATHB12 --------->ANAC58                          --------->ANAC58                       <---------MYB52(1)      --------->ANAC46                 --------->WOX13(1)                     <---------ANAC58          --------->ANAC58     ------>ZmHOX2a(1)    --------->ANAC58 ---At4g35610        <---------ANAC58       <---------AHL20(2)   <------ZmHOX2a(2) --------->AHL20(2) -->At4g35610        <---------ANAC46   <---------RVE1(1)   ------->TEIL       ---------->DOF2      <   tacaagagtccaaaaaaccaattccgttttcaataaagatcgatattttaagcaataacatgaatcgatccttcaaacccataaatcaaataagcatccc  16862000            <---------AHL20(2)           <---------AHL20(2)                                    ====================HOX2a_HOX2a           --------->AHL20(2)                         --------->YAB1                  --------->ANAC46     --------->ANAC55(2)                             <------ZmHOX2a(2)        <------ZmHOX2a(1)     <---------ANAC55(2)                             ================================HOX2a_HOX2a   --------->AHL20(2)                         <-----------GT1    ------>ZmHOX2a(2)  --------->ANAC46   <-----------GT1                     <---------At4g35610      <---------------------WRI1 ---------ICU4---------->DOF2          --------->At4g35610--------->DAG2 --------->YAB1       -------   aaaaattacataatttaaaagcagaaatttttgacaagaagagctgaattactcgatcataaggtgatcgatgaataataggaatcacacagcattgaaa  16862100                                                                            --------->ARR14(2)                                                                            <---------ARR14(2)                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                       --------->ANAC58             -                                                                 ------->GAMYB               <-------       --------->YAB1                                         --------->MYB52(1)             <------- >>>>>>>>>TBF1                               ----------->GT1  ----------->RAV1(1)            <------- --->DOF2                              ---------->DOF2       --------->MYB46(3)      <-----------GT1<   gaagaagaatcataaatcacatgtataaaacaaattttaaaaaaagagagtataacacgatgaacaacagaacaagcaaattcggttttaccttggcgtg  16862200       --------->ALFIN1            --------->TOE2(3) ----->ZmHOX2a(1)                  --------->TOE1(3)                                                < --ANAC58                       <-----------GT1<------ZmHOX2a(1)       <---------At4g35610          < --ANAC46            <---------TOE2(2)       <---------TOE2(3)         --------->At4g35610  --------- --ANAC58            <---------TOE1(2) <---------YAB1         ---------->DOF2            ---------->DOF2 ----------DOF2   <---------ANAC46 <---------DAG2   ---------->DOF2 <------ZmHOX2a(1) <------ZmHOX2a(1)   tcctttagagtgttgaattgtcgtagttttgaagttaccttatcatttaggaagaaaagagagagaaagaggaagatgagagagtttaggagaaaggaaa  16862300                           <------ZmHOX2a(1)                         --------->ALFIN1                        <------ZmHOX2a(1)                                                          <-                      --------->ALFIN1                         <---------YAB1                <------- ---------TOE2(3)    <------ZmHOX2a(1)                        <-----------GT1              --------->WOX13(1) ---------TOE1(3)  --------->ALFIN1   <----------ID1       <---------GLK1(2) *TSS        <---------ATHB12 -->GT1       ---------->DOF2 <------ZmHOX2a(1) --------->GLK1(2)   --------->AHL20(2)   ------------   ttagggtttgcagagagaaaggaggaggaggaggatgaagaagacaagagaattttgttccgattttcatttttatatgtaaaccctacaaatcaatctt  16862400                      --------->AHL20(2)                   <---------AHL20(2)                   --------->AHL20(2)     --------->YAB1         <---------ICU4--------->AHL20(1) -------->HAHB4         <---------AHL20(2)           --------->AHL20(2)               ---------->ID1     --------->AHL20(2)--------->AHL20(2) <---------ICU4     <---------WOX13(1)   <----------DOF2--------->AHL20(2)  <---------AHL20(2)    <------------CBF        <---------MYB52(1)   --------->TOE2(3)  <---------AHL20(2)<---------TOE2(3)  --------->ATHB12  <---------ANAC58 ---------DOF2 <----------DOF2   ------------>CBF         <---------YAB1     <---------ANAC58 --ATHB12--------->AHL20(2) --------->MYB52(1)    ----------->GT1    <---------MYB46(3)        ------ >CBF<---------AHL20(2)<---------AHL20(2)--------->ICU4--------->ICU4<-----------RAV1(1)       ------   tctttctttaattttttcttttaaattaattaagggacaattaatgatcacatagtaattttgattgacatttgttgtttcttacagttatctcttacct  16862500                                                                          --------->AHL20(2)                                                                     <------NtERF2                                                                    <-----------HVH21                                     <-----------GT1                <---------RAP2.6(3)                                  <---------ICU4                   --------->RAP2.6(2)             <-           ----------->RAV1(2)    --------->YAB1                ------->GAMYB         --------->ANAC55(2)           --------->At4g35610   --------->ICU4                --------->MYB46(3)     --------->ANAC46           --------->ZAT2        <---------YAB1               --------->RAP2.6(3)    <---------LBD16           <---------At4g35610<---------MYB52(1)             <---------ICU4  <-----------GT1    <----           <---------ZAT2    <-------GAMYB                   --------->MYB52(1)   <----------DOF2 <--      <-----------GT1   <----------DOF2                   --------->YAB1  <---------AHL20(2)    <---- --->TOE1(3)           <---------ANAC58                  <---------YAB1  --------->AHL20(2)    ------ --->TOE2(3)           <---------ANAC58                --------->YAB1<---------MYB52(1)     <--------   tagaaaattaaccagctggtctcatgctttccgttattattacatccctccgtctaactataataacggccgtcatttatttctctttacggagttacct  16862600      <-----------GT1  <----------DOF2 --------ARR11(3) ------DOF2                 <---------AHL20(2)                ------>ZmHOX2a(2) -------CCA1(2)  <---------AHL20(2)                   --------->ATHB12              <---------YAB1 -----DAG2 <---------DEAR3(1)           ---------->DOF2     --------->ARR11(3) ----------->GT1 --->TOE2(3) <------NtERF2  <---------YAB1           <---------YAB1      ---------->DOF2     <------- ---GT1 --------->ANAC46   --------->AHL20(2)      --------->YAB1    <---------ANAC46   --------->AtLEC2   ttatctttttacgtcggagttaatttcatttttattacatagaaaagagtcaaacatgattcgatcttgtgtcttaaaagagagttatacttgcaaattt  16862700                                                          <---------ANAC58                                                          <---------ANAC55(1)                                                          <---------bZIP60(2)                                                          <---------TGA1a                                                          ===========================================                                                          --------->O2                                                          <---------O2                                                          <---------ANAC58                                                          <---------ANAC46                          -                                                          --------->ANAC55(2)    --------->MYB55(2)--                                                   <---------AHL20(2)            <---------MYB46(3)<-                                              <---------DAG2           <---------AHL20(2)     -------             <------ZmHOX2a(2)                --------->TOE2(3)      <---------RVE1(1)        -------            --------->ARR11(3)             <---------ALFIN1         --------->ARR11(3)        -------    <---------GLK1(2)          --------->AtLEC2   <---------YAB1    <---------ARR11(3)      --------- --------->YAB1   <---------ANAC46        --------->MYB46(3)        <---------GLK1(2)----------->GT1< --ARR14(2) <---------ARR11(3)<-----------------AGL3   ----------->HVH21     <-----------RAV1(1)   <-   gtatcagaattttagatcatgtgtgtaatcgacatacaaatggaaccaccttattatttgacgtgttttagatttttttatggtggatggatattaaagc  16862800    <---------WOX13(1)                                     <---------AHL20(2)    <--------P<---------ARR11(3)                           --------->AHL20(2)   <-------GAMYB------>ZmHOX2a(2)                      --------->AHL20(2)  <---------MYB46(3)     <---------LBD16               <---------AHL20(2)      --------->ATHB12 --------->ALFIN1       <---------ANAC46               --------->AHL20(1)      <---------ICU4 ==bZIP_DOF   --------->ARR11(3)                      <---------AHL20(2)       <--------HAHB4 ------>MYC3  <---------ARR14(3)                      --------->AHL20(2)      --------->ICU4 ------->O2   --------->ARR14(2)                   <---------ICU4            --------->ARR11(3) --------O2   --------->ARR14(3)                  <---------ATHB51           <---------ARR11(3) -->ANAC58    <-----------ARR10                   --------->ICU4<---------YAB1<---------YAB1 -->ANAC46    <---------ARR14(2)                  --------->AHL20(2)       <---------YAB1 -->ANAC58    --------->AGP1                      <---------AHL20(2)     --------->YAB1 ->DOF2  ------>ZmHOX2a(2) ----------->GT1       <---------AHL20(1)      <---------ICU4 -------MYC3  <---------AGP1              <----------ID1  --------->AHL20(2)--------->YAB1     ------ --------ANAC46<------ZmHOX2a(2)  ---------->DOF2--------->AHL20(2)     --------->ICU4      <--------   aacgtggttgatccaagatcttagttttggggaaaaaaaagaattcgacaaaataattaaattaatctgatagaattatgatcattagtccctactttgg  16862900  Previous    Next  AGI:  At4g35510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17540.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17540.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17540.3); similar to hypothetical protein [Vitis vinifera] (GB:CAN70005.1) Range:  from: 16860457    to: 16862377    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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