Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------REM1(1)                           <---------MYB46(3)                       <---------AtMYB61                                      ---------->DOF2                  ----------->RAV1(2)                                      <---------TOE2(3)                  --------->ZAT2 <---------ZAT2    <----------DOF2   <---------MYB46(3)                  <---------ZAT2 <---------At4g35610              --------->ZAT2                  --------->At4g35610<---------ANAC46             <---------ZAT2                  <---------At4g35610<---------ANAC58        <---------At4g35610            --------->MYB46(3)   --------->At4g35610         --------->At4g35610      <---------At4g35610 --------->ALFIN1        <---------ANAC58<---------At4g35610      --------->At4g35610 <---------DEAR3(1)      <---------ANAC58--------->At4g35610 ------REM1(1)  <-----------RAV1(2)  <---------ANAC58   <----------DOF2  ---------->DOF2            < -----TOE2(3)------->GAMYB<---------AtMYB61   <------ZmHOX2a(1)  <-----------RAV1(1)    <---------At4g35610   tgtagcgaagctcaacagccagctggaggtggtgaagctgcttgagaaggatgctttcctttgagctctgctggttaaaggaaagctctaagctcatatt  16841800                                                             --------->AHL20(2)                                                          <---------DAG2                                                      --------->ZAT18                                                      --------->ZAT14                                                    <---------ZAT18                           ------>ZmHOX2a(1)        --------->ZAT14                         <---------ANAC46         <---------------AtSPL8                       --------->ZAT18            --------------->AtSPL8                      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <----------DOF2                  <---------ANAC58               <---------ANAC46                  <---------ANAC46           <---------DAG2  <---------AHL20(2)              <---------ANAC58               <----------DOF2 <---------YAB1              <---------ANAC58        <-----------GT1 <---------ZAT18                            <--- ----------DOF2   <---------ANAC58  <-----------HVH21 <---------ZAT14   ------>ZmHOX2a(1) ---------->ID1   gtctttgaggcatttgtcttgtgtgtgtcctgaaccagtttcacaggctttttgtgtacactttttattagttcctctcttcttctaaatttgtctctta  16841900                                              <---------AHL20(2)                                          --------->AHL20(2)          --------->WRKY12                                          <---------AHL20(2)          --------->WRKY38(1)                                         --------->AHL20(2)           --------->ETT(2)                                      <--------ATHB1        <----------DOF2                                      --------->ATHB12<---------AHL20(1)                                     --------->ICU4   --------->AHL20(1)             --------->ATHB12                                 <---------ATHB12     <---------AHL20(2)            <---------YAB1                    ---------->DOF2  <---------ATHB12--------->AHL20(2)   --------->AtMYB61               <---------ATHB12 --------->ANAC58    <---------YAB1    --------->DEAR3(1)       ---------->DOF2          --------->ANAC58  --------->YAB1      <---------ETT(2) --------RAV1(1)---------->DOF2--------->WOX13(1)<---------YAB1    <---------ANAC46 --------->ICU4   tgttgttttaaaagtcaataaagaaagaaatagcaatcaatgatttaatttatgattatattctttatttcgtcgacctctacagaatgattcaatttgg  16842000                      <---------ANAC55(2)                    --------->CCA1(2)                    --------->GLK1(1)                   <---------ARR14(2)               <-----------GT1           <---------ANAC46                      <---------ARR11(3)                           -------   --------->YAB1  --------->ARR14(2)     ------>ZmHOX2a(2)                              --------->ZAT2   <---------ICU4 <------ZmHOX2a(1)     <---------ARR11(3)                       --------->ARR14(2)<- --------->GLK1(2)===============================HOX2a_HOX2a     <---------MYB52(1)      <---------ZAT2   aagaatcattctggtttggaggatatgtaagaaaaactacttgatctccaagttattccattcttctgttactgtattgcccaaattcccaagcttgaca  16842100       ---------->DOF2    --------->ANAC46                                                                       <---------ANAC58    --------->ANAC58                --------->YAB1          <----------DOF2                <---------ANAC58    --------->ANAC58              --------->GLK1(2)       ---------->ID1                 --------->ARR11(3)  <-----------GT1       --------->AHL20(1)            <---------ANAC58                   <---------ARR11(3) ----->CBF              <---------AHL20(1)            <---------ANAC58               ---------->DOF2 --------ICU4           <---------ARR11(3)          --------->ARR11(3)       <---------ANAC46*TSS<---   atatttacgcaaagctcaaaacccaaaatatttgagaatcaaaacaaaatcaagggtcttgtctttttttttttttttggtgtgaatcaaaggtcttgtc  16842200                                                                                        <<<<<<<<<GATA-1                                                                                        <<<<<<<<<GATA-3                                                                                        <<<<<<<<<GATA-4                                                                                  <---------MYB46(3)                                                                               <------MYB46(1)                                                                               <------MYB83                                                                            <---------ANAC58                                                                            <---------ANAC46                                                                         --------->ANAC46                                                                   <----------DOF2----------->GT1                                                                 --------->HSFC1(2)     <<<<<<<<<GATA-2                                                                 <---------HSFC1(2)    --------->ARR14(2)          <-------TEIL                                          ------->TEIL<---------ANAC58     --------->AHL20(2)                                      --------->ANAC58 <---------AtMYB61   ----------->GT1                                           --------->ANAC46 --------->ALFIN1   --------->ANAC58                                          --------->ANAC58<----------DOF2   --------->ANAC58                                 --------->ANAC58     --------->ANAC58 <---------AtLEC2                      ---------->DOF2 ---------->DOF2   --------->ANAC58 -------DOF2     ------>ZmHOX2a(1)----------->GT1   --------->ANAC58   <---------AtLEC2<---------ARR14(2)   tttgcaagtaaattcgttcctaatgaactgtgtgagtcgtttaaagtgtttgataagcaaagcacgaagctttgcacggcttggtggtgaatccactctc  16842300                                               --------->ATHB12                                              --------->ICU4                                              <---------YAB1                                           <---------MYB52(1)                                           <------NtERF2                        --------->LBD16   <-----------HVH21                        ------>NtERF2     ------>NtERF2                    <---------ALFIN1      <---------RAP2.6(3)                    --------->DEAR3(1)    <-----------TGA1                    --------->ANAC46     --------->RAP2.3(3)                   --------->ATERF1(1)   --------->RAP2.3(2)                  ------>NtERF2          --------->DREB2C(2)                  <---------ATERF1(1)    --------->RAP2.6(2)         <---------CCA1(2)              --------->RAP2.3(1)                                        --        ------>NtERF2  --------->DEAR3(1)--------->RRTF1(3)                                       ---       --------->DEAR3(1)               --------->ERF1                                           ====       --------->RAP2.3(3)             --------->LBD16                                           ----       --------->RAP2.3(2)             ------>NtERF2                                             <---      --------->DEAR4(2)<------NtERF2 ------->GAMYB                                            ------      --------->RAP2.3(1) <----------DOF2--------->DEAR3(1)             --------->ANAC58    ---------    --------->DEAR3(1)--------->ATERF1(1)--------->RRTF1(2)             --------->ANAC58<------ZmHOX2a(1)    ------->GAMYB--------->DEAR3(1)   --------->ANAC46            ----------->RAV1(1) <---------TOE2(2)   --------->MYB46(3)<---------ATERF1(1)--------->RRTF1(1)       --------->ANAC46     <---------TOE1(2)   <---------MYB55(2)--------->LBD16 --------->MYB46(3)<---------HSFB2a(2)          --------->TOE1(2)   --------->DEAR3(2)------>NtERF2  <---------At4g35610--------->HSFB2a(2)         <---------ANAC46<-   tctcaaccgccgtctctcgcctccgccgcgttttcttcatccgccgtcatgaatggtctcgaaactcacaacacaaggctctgtatcgtaggaagtggcc  16842400              --------->ATERF1(1)              <------NtERF2             <---------RAP2.3(1)             <---------ERF1             ------>NtERF2             <---------ATERF1(1)             <---------DEAR4(2)             <---------ORA47(2)            <---------RAP2.3(3)            <---------RAP2.3(2)            --------->DEAR3(1)            <---------DEAR3(1)            <---------RRTF1(3)           <---------ABI4(1)                                                                        -          <---------ATERF1(1)                                                                      --         --------->ANAC46                                                                          <-         --------->O2                                                                              <-         --------->ANAC58                                                                        ----         --------->ANAC58                                                                       -----       --------->ANAC46                                                                         =====       <---------ALFIN1                                                                        ------     --------->ANAC58                                                                          <-----     --------->ANAC58                                                                         -------     <---------ALFIN1                                                                         <------  <------NtERF2           --------->ZAT2                                                    <-------- --------->RAP2.6(2)      --------->At4g35610                                               <-------- ------->At4g35610    --------->ANAC46                                                  <---------AtMYB61 ------>MYB52(1)      --------->ANAC58                                                  --------->ALFIN1 ==================MYC_MYB<---------ZAT2                                               <---------MYB52(1) ------>CDC5<---------ANAC46                                                          --------->LBD16 --------RAV1(2)      --------->ANAC58                                 <---------DOF5.7(2)  <-------- --->PCF5<---------TGA1a  <---------At4g35610                          --------->MYB52(1)<---------MYB46(3) >ALFIN1 --------->TGA1a ------->TEIL                          <---------MYB46(3)    --------->LBD16= --------At4g35610  <-----------GT1                         <------ZmHOX2a(1)       <---------LBD16<-   cagcggcacacacggcggcgatttacgcagctagggctgaacttaaacctcttctcttcgaaggatggatggctaacgacatcgctcccggtggtcaact  16842500            --------->TGA1a            --------->O2         ----------->HVH21         --------->DEAR4(1)         ------->GAMYB         --------->At1g77200         --------->DEAR3(1)         =============MYC_MYB      <---------ALFIN1      --------->AtMYB61      --------->DEAR3(1)     <---------MYB55(2)     --------->MYB46(3)   ------->GAMYB   ===================MYC_MYB   --------->AtMYB61  --------->MYB46(3)  <---------MYB55(2) =====================MYC_MYB -------->P <---------TGA1a ------>GAMYB ------->MYB46(3)                  <---------HSFB2a(2) --------MYB111(1)                 --------->HSFB2a(2) --------MYB55(2)              <---------GLK1(1) ----->MYB52(1)                --------->GLK1(1) -->GAMYB--------->DREB2C(2)--------->LBD16 =====================MYC_MYB <---------ARR14(2)                         <---------ANAC58 --->MYB46(3)              --------->LBD16                               <---------ANAC46 ----MYB52(2)       <-----------ARR10          <---------HSFB2a(2)       <---------ANAC58 -->At4g35610   --------->HSFB2a(2)<---------HSFC1(1)                    --------->ANAC55(2) ---At4g35610   <---------HSFB2a(2)--------->HSFC1(1)    --------->At4g35610 -WRKY45--------->DEAR3(2)--------->LBD16      <---------LBD16 ----------->HVH21                 ---- -WRKY38(1) <---------O2 <---------LBD16       --------->HSFB2a(2)       <---------ANAC55(2) -------- -WRKY12--------->MYB46(3)<---------LBD16<---------ARR11(3)<---------ZAT14                   -------- =====================MYC_MYB --------->ARR14(2)         <---------At4g35610     --------->MYB52(1) < --------MYB111(2) <---------GLK1(2)     --------->ARR11(3)--------->ZAT18--------->LBD16  --------->GLK1(2)   aacaaccaccaccgacgtcgagaatttccccggatttccagaaggtattctcggagtagagctcactgacaaattccgtaaacaatcggagcgattcggt  16842600                        ---------->DOF2                                            ----------->HVH21    <---------RVE1(1) --------->ANAC58                                             --------->WRKY12   --------->ARR11(3) --------->ANAC58                                 --------->ANAC58    ---------- ----->SPL7        ----------->HVH21                                   --------->ANAC58   --------->At5g28300 ->MYB59           ----------->TGA1                                  ---------->DOF2------>NtERF2 --- ------->AtSPL3 <---------DEAR3(1)                                <-------TEIL     ----------->TGA1 ---------------------WRI1      <---------GLK1(1)          <-----------GT1       <---------At4g35610   actacgatatttacagagacggtgacgaaagtcgatttctcttcgaaaccgtttaagctattcacagattcaaaagccattctcgctgacgctgtgattc  16842700  Previous    Next  AGI:  At4g35450.1    Description:  AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding. Identical to Ankyrin repeat domain-containing protein 2 (AKR2) [Arabidopsis Thaliana] (GB:Q9SAR5;GB:O81128;GB:Q9SVX0); similar to AKR2B, protein binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT2G17390.1); similar to putative ankyrin-repeat protein [Vitis aestivalis] (GB:AAQ96339.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 16839550    to: 16842082    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g35460.1    Description:  NTR1 (NADPH-dependent thioredoxin reductase 1). Identical to Thioredoxin reductase 1 (NTR1) [Arabidopsis Thaliana] (GB:Q39243;GB:Q9SVW9); similar to NTRA (NADPH-dependent thioredoxin reductase 2) [Arabidopsis thaliana] (TAIR:AT2G17420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68513.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II, active site; (InterPro:IPR008255); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); con Range:  from: 16842193    to: 16844087    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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