Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->DEAR3(1)                                     <---------MYB55(2)                                     --------->DEAR3(2)              --------->ATHB12     ------>MYB46(1)           <---------ZAT2          --------->MYB52(1)           <---------At4g35610   <---------MYB111(2)           --------->At4g35610   <---------MYB55(2)      --------->HSFB2a(2)        --------->MYB46(3)      <---------HSFB2a(2)        <---------MYB46(2)      <---------HSFC1(1)         <---------MYB111(1)                           --------->DEAR3(2)----   --------->GLK1(2)             --------->AtMYB61                   --------->MYB46(3)          ----  --------->ARR14(2)            --------->ANAC46                    --------->ANAC58    ------>NtERF2  <---------GLK1(2)     --------->At4g35610                         --------->ANAC58    --------->ABI4(2)  <---------ARR14(2)    <---------At4g35610<---------MYB52(1)   --------->ANAC58    ------>ZmHOX2a(2) ---------->ARR10     --------->ARR14(2)   --------->ARR14(2)   --------->ANAC46  --------->ARR14(2) -------At4g35610     <---------ARR14(2)   <---------ARR14(2)   --------->ANAC55(2) <---------MYB46(3) ------>At4g35610    <------ZmHOX2a(1)------->GAMYB             <---------ANAC55(2) <---------DEAR3(1) -------ZAT2 <---------YAB1  --------->MYB46(3)                 --------->ANAC55(1)<------ZmHOX2a(2) -----HSFB2a(2)    <---------TOE2(3) --------->MYB46(3)         --------->ANAC58  <---------ARR14(2) ---->HSFB2a(2) <---------WOX13(1) ------>MYB83          --------->YAB1        --------->MYB46(3)----   agcagattctcgaagctgattgaggatgctcaccaccaaaccgccgatagtcggaacaaggataacacgcaaccaattggaaccgatcggtgcctctcta  16839000                                                                                                    -          <---------ALFIN1         ---------->DOF2                                                 --      --------->ZAT2           --------->LBD16                                                    ---      --------->At4g35610      <---------TOE1(2)                                                 <---      <---------At4g35610     <---------LBD16                                                    <---     ------->TEIL             <-----------RAV1(2)   --------->ZAT14                              <---  --------->ANAC58   --------->GLK1(1)       --------->ANAC58                                    ----  --------->ANAC58  --------->GLK1(1)        --------->ANAC58                                    ----  --------->ANAC46  <---------GLK1(1)    --------->HSFB2a(2)                        --------->ZAT14-- ----->ANAC58      <------ZmHOX2a(1)     <---------HSFB2a(2) <---------MYB46(3)     <---------ZAT14-- ----->ANAC58  =========================HOX2a_HOX2a --------->ZAT18       <---------ALFIN1       <--- ----->ANAC46  <------ZmHOX2a(2) <------ZmHOX2a(1)  <---------ZAT18      --------->MYB46(3)      ----   agccacgaagctccacgatcaggaatcccatcccaggaaaagtctcgaagcaagtgaacacagttgttgaatagaaccacactaactccagtgagaacac  16839100                                                                                                <<<<<                                                                                                <<<<<                                                                                                <<<<<             --------->ANAC46                                                                   <<<<<             --------->ANAC58                                                                   <<<<<             --------->ANAC58                                                            <---------WRKY38(1)            <------NtERF2                                                                <---------WRKY12           ------>NtERF2                                                              --------->LBD16          --------->DEAR3(1)                                                         --------->ATERF1(2)       --------->ANAC58                                                              <---------ATERF1(2)       --------->ANAC58                                                             <------NtERF2     ---------->DOF2                                                               <---------ATERF1(1)    <---------ATHB12                                                               ------>NtERF2<<<<<   ------>MYB46(1)                                                                 --------->ABI4(1)   ------>MYB83                        <---------At4g35610                        <---------DEAR3(1) --------->AtMYB61                  <---------At4g35610                           --------->RAP2.3(3) ------->GAMYB                      --------->ATERF1(1)                           --------->RAP2.3(2) <---------MYB59                    --------->At4g35610                           --------->ATERF1(2) -------->MYB46(3)                 <---------ATERF1(1)                            --------->DEAR3(1) ---->MYB83<---------ATERF1(1)    <---------RAP2.6(2)                             <---------ATERF1(2) ------>MYB55(1)                  <---------DEAR3(1)                             --------->DEAR4(2) ------MYB111(1)                 --------->RAP2.6(3)                             --------->RAP2.3(1) ------MYB46(2)                ----------->HVH21                                 --------->ORA47(2) - ------MYB55(2)              --------->LBD16                                     --------->ATERF1(1)< ----->AtMYB61               ------>ZmHOX2a(1)         --------->TOE2(3)         --------->ERF1------ ----->DEAR3(1)         <---------At4g35610          ------>MYB46(1)            <---------RAP2.3(1) - ---->MYB46(1)          <---------ZAT2<---------MYB46(3)                  ------>ZmHOX2a(1)   <------ ------>P--------->DEAR3(2)----------->RAV1(2)       ------>MYB83       <---------At4g35610  <------- ------MYB111(2)       --------->ANAC58<---------ZAT2-------->P         ----------->RAV1(2)  -------- ----->MYB46(3)        --------->ANAC58--------->At4g35610    ------>ZmHOX2a(1) <---------ATERF1(1) <   caaccaaacaagccgacgctatcgcaagctcctgagacggctgctgatcaaatccaacctcatcctgatcagtctcctgcttcgccgccggtaaacgcgg  16839200                                                                                                   --                                                                                               ------        --------->RAP2.6(2)                                                                    <-----       --------->MYB46(3)                                                                      ------      <---------At5g28300                                                                     <------ <<<<<E2Fe                                                                                   <------- <<<<<E2Ff                                                                                <---------HSFB2a(1) <<<<<E2Fd                                                                                --------->HSFB2a(1) <<<<<E2Fb                                                                                <---------GLK1(1) <<<<<E2Fc                                                                               --------->GLK1(2) <<<<<E2Fa                         --------->At5g28300                                   <---------ARR11(1) -------->HSFC1(2)             --------->MYB52(1)                                        <-----------ARR10 ---------HSFC1(2)           ---------->DOF2                              ----------->GT1--------->ARR14(2) --->LBD16                ----------->GT1          <---------ZAT14     <---------MYB52(1)---------->TaMYB80 -------->HSFB2a(1) --------->ANAC58        --------->ANAC58         <---------DEAR3(2)  ------->TEIL ---LBD16------>NtERF2 <---------ARR14(2)   --------->ANAC58         <---------MYB46(3)  <---------ARR14(2) --LBD16------->GAMYB  --------->ARR14(2) <------ZmHOX2a(1)         <---------TOE2(2)   <---------ARR14(1) ->TOE1(2)          --------->ANAC58  ---------->DOF2     ---------->DOF2 <---------ANAC46--------->GLK1(1) ---------HSFB2a(1)<---------LBD16----------->GT1  --------->ZAT14  <---------DEAR3(1)  <---------CCA1(2)   gaaaattctaccgccaatagcgacggaaccgaaaaacggtgaaaggacgacattgaactgaaaaggaacgtcggttttgtgaattggagcgaatctccgg  16839300                                                                        <---------ANAC58                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)                                                                        <---------ANAC58                                                                        <---------ANAC46                                                                      <---------ANAC58                                                                      <---------bZIP60(2)                                                                      <---------O2                                                                      <---------TGA1a                                                                      <---------ANAC58                                                                      <---------ANAC46                       --------->ZAT14                             ----------->TGA1                       <---------ZAT14                           <---------O2                     <------NtERF2                             <---------ZAT14            ------>ZmHOX2a(2)                                  --------->ZAT14           <------ZmHOX2a(2)                                   --------->REM1(2)          <---------ARR14(2)           <---------At4g35610    <---------MYB52(1)    <---------O2     <---------At4g35610         ------->TEIL--------->LBD16    <---------TGA1a  --------->At4g35610  ------>NtERF2     <---------ANAC55(1)                    --  --------->CCA1(2)  --------->ZAT2  --------->ALFIN1       <---------ANAC55(2)                    <- --------->ARR10     <---------ZAT2<---------ANAC58         <---------ANAC46      <---------------AGL15 --->HSFB2a(2)      ----------->RAV1(1)--------->At4g35610  <---------ANAC58      --------------->AGL15 ----HSFB2a(2)    --------->ZAT18  <---------ANAC46         <---------ANAC58     ----------------->AGL2 --->LBD16--------->ARR14(2)       --------->ALFIN1    <---------At4g35610       ----------------->AGL3 ---LBD16<---------GLK1(1)         <---------ANAC58    --------->At4g35610      *TSS  <---------DOF5.7(2) --LBD16 --------->GLK1(1)   --------->ALFIN1   --------->MYB52(1) ----------->HVH21  --------->MYB52(1)   gaagagacgggagatcggagggcagcacagagtggaagcgtggctgccatgaacggctgcttccgtgaagtgacgcgtgtttatccattaacggataatt  16839400                           <---------ARR11(3)                           --------->ARR11(3)                      XXXXXXXXXXXXXXXXXXX>MIR3434                   <---------ANAC55(1)                   <---------ANAC55(2)                   --------->ANAC55(2)                   <---------ANAC58                   <---------ANAC46                   <---------bZIP60(2)                   <---------O2                   --------->TGA1a                                                           --------                   --------->O2                                                              <-------             <-----------ARR10                           <----------DOF2                     <-------             <---------ARR11(3)  <---------YAB1   <---------ANAC58                      ------------>CBF            <---------CCA1(2)------>ZmHOX2a(2)    <---------ANAC58        <-----------TBP    -------- ------>ZmHOX2a(2) <---------ANAC58       --------->ANAC58            ----------->GT1  --------->YAB1 ------->ARR11(3)  <---------TGA1a        --------->ANAC58   <---------TOE2(3)        <---------ATHB12 --------ARR11(3)  =================================================bZIP_DOF      ------------>CBF<--   tgatcttaaatcacaaatcttacgtggctgatcttattattcaaacgcatgggcttgggccttgaggtaaacaggtttatatgggccaataacaataaat  16839500          ---------->DOF2      --------->YAB1  --------->AHL20(2) ->AHL20(2)                           ------------>CBF    <-------GAMYB<-------GAMYB               <- --AHL20(2)                    <-------TEIL              <-----------RAV1(1) ------>ZmHOX2a(2)     <- --AHL20(1)                  XXXXXXXXXXXXXXXXXXXX>MIR843 <---------MYB46(3)<---------ARR11(3)      -- ->AHL20(1)                <---------TOE2(3)         --------->ALFIN1  <---------At4g35610         -- -------YAB1            <----------DOF2           *TSS<---------MYB46(3)   --------->ARR11(3)    <---   ttgattaaaaataaaaggcctcttagctttaggttcaaacttcaatggagaagcagtggctgttgtccctcgcagttgatcttcttctcaatccaaaatc  16839600            --------->AHL20(2)            <---------AHL20(2)         --------->AHL20(2)        <---------AHL20(2)        --------->AHL20(2)          --------->AHL20(2) --------ZAT2              --------->bZIP60(1)                                          ----------->RAV1(1) --------At4g35610         <---------bZIP60(1)      --------->GLK1(2)                  --------->ANAC46 ------->At4g35610         --------->ETT(2)      <---------GLK1(2)                   --------->AtMYB61 ------->ZAT2--------->AHL20(2)     <---------AHL20(2)                               <---------ALFIN1 --------RAV1(2)          ---------->ID1 ---------->DOF2            <-------TEIL   ------>NtERF2 <---   cagctgataaataaataatttttctcttgtcgtcatattaaaaaaaagaaagattatctgtatttcaagtttcatgagcgtttgccaccacaacattgtc  16839700                                                   <-------GAMYB                                                  --------->MYB46(2)                                                  --------->MYB111(2)                                                  --------->MYB52(2)                                                  --------->MYB111(1)                                                  <---------MYB46(3)                                              <---------TOE1(2)                                              <---------TOE2(3)     <--------P           <----------DOF2     --------->MYB59                 ------>ZmHOX2a(1)   ----------->GT1  <<<<<<<<<TBF1             <---------TOE2(2)         ---------->ID1 <---------ANAC46<<<<<<<<<TBF1              <---------MYB52(1)      <----------DOF2               --- -------DOF2  <<<<<<<<<TBF1           <---------GLK1(2)       <------------------------ANAC81<-------GAMYB   ttttcgggttaatttcttcttcttcttccttttcttactaaattctcttaggtagttgtcgattcgatttctttgtcttcctcttcgcttattttcgttg  16839800                                                                                                   <-                                                                                                   --                    --------->LBD16                                                              <---                    ------>ZmHOX2a(1)                              <---------ANAC58            <-----                  <---------LBD16                                  <---------ANAC58      ------>ZmHOX2a(1)              <----------DOF2                                 --------->MYB52(1)     --------->ARR11(3)              <---------DAG2                               --------->TOE2(3)         --------->ARR14(2)             <---------DAG2                                --------->ANAC55(2)       <---------ARR14(2)        <-----------GT1                                  --------->ICU4              <---------ARR11(3) ---->TEIL<-----------GT1                              --------->YAB1 ----------------->AGL1  <------   aatctcttgtttacaccttttcctgaaaacaaaattgtgttttttgtagggttttagtcatacttaatggcttccaattcggagaaaaatcctcttcttt  16839900  Previous    Next  AGI:  At4g35440.1    Description:  CLC-E (CHLORIDE CHANNEL E); voltage-gated chloride channel. Identical to Chloride channel protein CLC-e (CLC-E) [Arabidopsis Thaliana] (GB:Q8GX93;GB:O65486;GB:Q93XN4;GB:Q9SVX1); similar to CLC-F (CHLORIDE CHANNEL F), voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT1G55620.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47567.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72098.1); contains InterPro domain Chloride channel, core; (InterPro:IPR014743); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644); contains InterPro domain Chloride channel, voltage gated; (InterPro:IPR Range:  from: 16835991    to: 16839380    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g35450.1    Description:  AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding. Identical to Ankyrin repeat domain-containing protein 2 (AKR2) [Arabidopsis Thaliana] (GB:Q9SAR5;GB:O81128;GB:Q9SVX0); similar to AKR2B, protein binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT2G17390.1); similar to putative ankyrin-repeat protein [Vitis aestivalis] (GB:AAQ96339.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 16839550    to: 16842082    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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