Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->YAB1                                           ------>ZmHOX2a(1)                                     <---------ARR14(2)                                           <--                                     --------->GLK1(2)             --------->DAG2                ----    --------->ZAT14                  <-----------ARR10      <------ZmHOX2a(1)                   <---- --->ZmHOX2a(2)                      --------->ARR14(2)   <---------TOE2(3)    ----------->GT1  ----- --->ATHB12                         <---------GLK1(2) --------->YAB1 <-----------HVH21     --------->MYB52(1) -AtLEC2                 <---------At4g35610  ------>ZmHOX2a(1)   ---------->DOF2   --------->GLK1(2)   tcgcagtacattcagggttccttctatagctggtctcagaatctcctcctatcaaattataaggaagaaaaagtcagagaatagataatctagtaacaga  16835200                                       <---------ANAC58                                       <---------ANAC58     <------MYB83--------->LBD16                                  <---------bZIP60(2)       <------MYB46(1)             ----------->HVH21    <---------ANAC46         --------->MYB59 ---------->DOF2  ---------->DOF2                 <---------ANAC58         --------->MYB46(2) --------->ANAC46                 <---------ANAC58         --------->MYB111(1) -----TEIL <---------ZAT6   ----------------------->TaNAC69(2)     --------->MYB46(3)    <---------HSFB2a(1) ----->CCA1(2)            --------->DAG2 --------->ANAC58 <---------MYB55(1)             --------->HSFB2a(1) -----ARR14(2)           ---------->DOF2 --------->ANAC58 <--------P  <---------LBD16    <---------ALFIN1 ---->ARR14(2)    ----------->GT1 <---------O2         <---------ZAT6--------->MYB52(1)  --------->ZAT6   tacacaaagcatagtgtgaccagaaaaaaaagtttgtcgtggcatgcctctggattagaggtaggtttaagcaccggagaagcagtatggaacactcctt  16835300                                                        ------->GAMYB                                                      -------->P                                                      ------>MYB46(1)                                                      ------>MYB83                                                     --------->MYB55(1)                                                    <---------MYB111(2)                                                    --------->DEAR3(1)                                                    --------->AtMYB61                  --------->YAB1                    --------->MYB46(3)                 <---------YAB1                     <---------MYB46(2)            <---------ANAC58                        <---------MYB55(2)            <---------ANAC46                       --------->MYB46(3)                         -------            <---------ANAC58                     --------->REM1(1)  <----------DOF2           -------       <---------ICU4                 <---------AHL20(2)--------->TOE2(3)                    <-------TEIL       --------->ATHB51               ---------->DOF2--------->MYB52(1)                      <-------      --------->ICU4                 --------->AHL20(2)--------->MYB46(3)                    --------   ggcatcccattatggcgttatcaaaacttccttcttccattaaatcagccttcaccaaccgtagtctctcctttgccccttccaacttccataggtgcgc  16835400                                                                                                    -                                                                                                    <                                                        --------->ARR14(2)                         <-                                                        <---------ARR14(2)                         --                                                     <---------MYB111(1)                           --                                                    <------NtERF2                                  <-                                                --------->ANAC58                                   <-                                                --------->ANAC58 --------->ANAC58                 <--                  <<<<<<<<<WRKY18          ----------->HVH21     --------->ANAC58              <----- -->ANAC58      <-----------HVH21      --------->ZAT14 ------>MYB83                          -------- -->ANAC58     ------>ZmHOX2a(1)       <---------ZAT14 ------>MYB46(1)                   ---------->DOF2 --ZAT18     <---------ANAC58    --------->MYB52(1) --------->ANAC58                ================= ->ZAT18     <---------ANAC58  <---------MYB52(2)   --------->ANAC58 ---------->DOF2<------ZmHOX2a(1)   aagtttcttctcatttcctgtcaaaacatgaaaactaactgagtactgacaggcaccaaatcggaccaagacaaaggaaacaagaaggatagaaagacct  16835500    ----------->HVH21 ------>ZmHOX2a(2) ===================================HOX2a_HOX2a -------->GLK1(1) ---------GLK1(1) --------AGP1 ------->ARR11(3)                       <---------HSFC1(2) --------->ANAC58 ------->ARR14(2)            ------>ZmHOX2a(1)           ---------->DOF2 --------ARR11(3)           --------->TOE2(3)      --------->ANAC58 --------ARR14(2)           --------->TOE1(3)      --------->ANAC46 -------CCA1(2)          --------->ARR14(2)        --------->ANAC58             --------->ANAC46   <- ----LBD16               <---------ARR14(2)    <-----------GT1       ----------->RAV1(2)       ------ ->ARR11(3)    <---------MYB52(1)       --------->HSFC1(2) --------->ANAC58  ----------->RAV1(1)   <- =======HOX2a_HOX2a     <---------CCA1(2)    <----------DOF2         ====================RAV<--------   ggatctctgactgttccgataacttcatatccttcaagtagaagcctctttacaagccaagaagccaagaagcctgaagcaccagtaacacagacttttc  16835600                                                        ------->MYC3                                                        ------->MYC2                                                        <-------MYC2                                                     <---------ANAC58                                              --------->AHL20(2)    <---------WOX13(1)                        <-----------TBP      <---------AtLEC2   <---------ANAC58                          <---------YAB1      --------->AtLEC2   <---------AtLEC2                        --------->ATHB12 --------->ARR14(2)   <---------ANAC58                        <---------ICU4   <---------ARR14(2) ---------DOF2          *TSS               --------->YAB1   ------->TEIL                       ------ ---->ID1       <---------LBD16           --------->ICU4<-------MYC3------->TEIL            --------- --------MYB52(1) --------->LBD16         <---------ATHB12 <---------CCA1(2)   <---------ZAT18------- --DOF2  ------>ZmHOX2a(2)        <---------ALFIN1   <---------ANAC58          --------->ZAT18<------   cctttgcttgatccattttccggtataaatggaatcacacccgaatgattatatagcatgtgtatccatgcatgttcagagggtactagctatatcatga  16835700                        --------->WOX13(1)                    <------MYB83                    <------MYB46(1)                   --------->MYB59                   --------->MYB46(2)                                                 ------>MYB83                  <--------P                <---------ANAC46                          ------>MYB46(1)                <------MYB46(1)             <---------ANAC58                        ------->GAMYB                <------MYB83                <---------ANAC58                        --------->AtMYB61               --------->MYB52(2)        <--------P                                --------->MYB46(3)               --------->MYB46(2)       <-------GAMYB      ---------->DOF2       <-----------GT1   <--------P  --------->MYB111(1)   --------->LBD16    <---------MYB59     ----------->GT1 --->ATHB12    <---------AtMYB61    <---------ANAC58    --------->TOE2(3)   <---------MYB46(3)   ---- >YAB1         --------->MYB111(2)  <---------ANAC46    --------->TOE1(3) <-------GAMYB        <----- -->ICU4       --------->MYB59      <---------ANAC58   ----------------->AG<--------P----------->RAV1(1) ---YAB1     <---------MYB52(1)    <---------LBD16 <----------DOF2    <------ZmHOX2a(1)        <-----   tggaggtaagtataggttaggtaggtcattcaacccatgcggggttgcttcttctttacctaaaaggttttaggagggttgtttaaccaacacaatggcc  16835800                                                                       ----------->HVH21                                                                     --------->At4g35610            -                                                                     <---------At4g35610   ----------                                    <-----------GT1                 <---------RAP2.3(1)   --------->ANAC58                   --------->HSFC1(2)                              <---------ANAC58       --------->ANAC46                   <---------HSFC1(2)                              <---------RAP2.3(2)    --------->ANAC58                   <---------HSFB2a(1)                             <---------RAP2.6(2)  --------->ANAC58 ------->HVH21     --------->HSFB2a(1)                             <---------ANAC58     <---------ALFIN1 ----ANAC58       <---------KAN4(2)--------->RVE1(1)               <---------RAP2.3(3)  --------->ANAC46 ----ANAC58     <------ZmHOX2a(1)  --------->CCA1(1)              --------->RAP2.6(3)   --------->ANAC58   tgactactgttttctctaggaattttcttagagaaaaatatccatacaattagatgtcaacatgcccttgcggctcaccgagagagacacacacaccaga  16835900              <---------AHL20(1)              --------->ARR11(3)                       --------->GLK1(1)              --------->AHL20(1)                       <---------GLK1(1)              <---------AHL20(2)                   --------->ANAC58              <---------ARR11(3)                   --------->ANAC58                 <----------DOF2 -------->MYB52(1) <---------AHL20(2)         --------->ZAT18      <---------MYB46(3)      ---------- ->RAV1(1)    --------->AHL20(2)              <---------ZAT18  <---------YAB1 <---------MYB52(1)   aataagggcattccaatatatttcaatgttcttcaatatacaaaatagtggacaaggaaacccttacaattgttgacactgttagtctttaagtagtcaa  16836000                                                                    --------->GLK1(2)                                                           <-------TEIL                              <---------DAG2           <---------TOE2(3)                         --------->ANAC58              <---------------AtSPL8              ----------                       ---------->DOF2                 --------->MYB59                     --------->YAB1                 --------->ANAC46                      <---------------AtSPL3       ----------->GT1             --------->CCA1(2)<----------DOF2    --------------->AGL15           --------->DAG2 ->GT1    <---------YAB1 --------->ANAC58      --------->YAB1----------->GT1    ---------->DOF2   aactttctcaatatgatataagtcagaaagcactttacaaaatagacaatactaagtaaggtacagtaacaatctgtaagaaaaaagtgtaaatggtaac  16836100  Previous    Next  AGI:  At4g35420.1    Description:  dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family. similar to cinnamyl-alcohol dehydrogenase, putative (CAD) [Arabidopsis thaliana] (TAIR:AT5G19440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47562.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 16833938    to: 16835624    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g35440.1    Description:  CLC-E (CHLORIDE CHANNEL E); voltage-gated chloride channel. Identical to Chloride channel protein CLC-e (CLC-E) [Arabidopsis Thaliana] (GB:Q8GX93;GB:O65486;GB:Q93XN4;GB:Q9SVX1); similar to CLC-F (CHLORIDE CHANNEL F), voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT1G55620.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47567.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72098.1); contains InterPro domain Chloride channel, core; (InterPro:IPR014743); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644); contains InterPro domain Chloride channel, voltage gated; (InterPro:IPR Range:  from: 16835991    to: 16839380    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g35430.1    Description:  unknown protein Range:  from: 16835994    to: 16836426    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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