Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------DAG2                                                <-----------GT1                                              <----------DOF2            --------->TOE1(2)            <---------ANAC58                 --------->DAG2           <---------ANAC58              --------->ANAC55(2)    <---------ANAC58 ---------ICU4                           <---------ANAC58       <---------ANAC58      ---------->DOF2 ------->ICU4                            <---------ANAC55(2)    <---------ANAC46    --------->ANAC58 --------ATHB12                     <---------ICU4 <----------DOF2 <-------TEIL     --------->ANAC46 ------ICU4<---------ANAC58   --------->YAB1  <---------DAG2 <---------MYB52(1)     --------->ANAC58 -YAB1     <---------ANAC46  <---------YAB1<-----------GT1 <---------ZAT6---------->DOF2   aatgactacattatcgtgggaattgaagaaaatcatagtcattacttactttactttactactgttacgttcaaaaaaagtcatacaagaaagctagaaa  16819500                                                                                               ------                                           <---------ANAC58                                    <-----                                           --------->ANAC55(2)                                 <-----                                           <---------ANAC58                                    <-----                    <-----------GT1        <---------ANAC55(2)                                 <-----              <---------YAB1            --------->ARR14(2)                                --------->YAB1            --------->YAB1              <---------ARR14(2)                           <---------DAG2           <---------ATHB12             <---------MYB52(1)                           <----------DOF2           <---------ATHB51          <---------TOE2(3)                           <---------ZAT14 ----           --------->ICU4  --------->HSFB2a(2)                          --------->ANAC58 <---------AHL20(2)       --------->ZAT18     <---------HSFB2a(2)                 <---------YAB1  <---------YAB1<-------       <---------ZAT18 <----------DOF2 <-------GAMYB ---------->DOF2    --------->ANAC58--------->AHL20(2)   atgtataagtgcaattatgtttctactttctagattactacggttacgttcccatcaaagtcaatttgattaagacgcattactatactttttaataacg  16819600                                                                               --------->ATHB12                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                       --------->ALFIN1                                                                      <-------PIF5                                                                      --------->TOE1(2)                                                                      ------->PIF5                                                                     <---------ANAC46                                                                     --------->TGA1a   <---------MYB52(1)                                                <---------ANAC58 --->ANAC55(2)                                       <---------YAB1  <---------O2   ----------->GT1 ----ANAC58                                  <---------WOX13(1)      <---------TGA1a<------MYB46(1) ----ANAC55(2)                  --------->AHL20(2) --------->YAB1    --------->O2   <------MYB83 ----O2                         <---------AHL20(2)<------ZmHOX2a(2)  <---------bZIP60(2) ----ANAC58             ------------>CBF    <------------CBF         <---------ANAC58           <---- ------->HVH21      ----------->GT1        --------->ATHB12       ----------->HVH21<---------MYB46(3) ----GT1         <---------AtLEC2         <---------YAB1   ----------------->AGL1  ----------->GT1  <   tgaccattagtatacatttgtatggtatcaatatttaaaaacatttgattggatcatagttgccatatgggacgtgggagatgagtgggtaataagacag  16819700                                   <----------DOF2                               <-------MYC3                               ------->MYC2                               <-------MYC2      <------NtERF2            ------->PIF5     ------>NtERF2             <-------PIF5    --------->ANAC58           ------->MYC3              <----------DOF2    --------->ANAC58          --------->ANAC58     <------ZmHOX2a(1)                               --    --------->ANAC46          --------->ANAC46    --------->ANAC58                                 --   ------->MYC3               --------->ANAC58    --------->ANAC58                               <---   <-------MYC2             <---------ALFIN1   --------->ZAT2                                   -----   ------->MYC2          =================================HOX2a_HOX2a                           -----   <-------MYC3          ------>ZmHOX2a(2)     <---------At4g35610                      <---------AHL20(2)  --------->ANAC46       =======================HOX2a_HOX2a   ------------>CBF          --------->AHL20(2)  --------->ANAC58      --------->GLK1(1)      --------->At4g35610                      ----------->TBP  --------->ANAC58      XXXXXXXXXXXXXXXXXXXXX>MIR831---------->DOF2   <---------At4g35610       <---- -------HVH21          <---------ARR11(3)      <---------ZAT2<-----------GT1          ----------->TBP ---------ALFIN1       --------->ARR11(3)------>ZmHOX2a(1)  <-----------GT1<---------ATHB12    ------   tcacacgcgcctctctataacacatgatctccacgcgctcttcctcttcagcaggaaagcttttaccaattcagcaaatcaagaagctatataaatgccg  16819800       <------------CBF    --------->ANAC55(2)                                                                     <--------   <---------TOE1(3)                                                                        <--------   <---------TOE2(3)                                                                       --------->ANAC46  --------->MYB52(1)                                                                       --------->bZIP60(2) ------->ANAC58                                                                          <---------DOF5.7(2) ------->ANAC58               --------->WOX13(1)                                        <---------WRKY12 ------ALFIN1               ------------>CBF      --------->MYB52(1)            ------>NtERF2 ->NtERF2            <------ZmHOX2a(2)           --------->AtMYB61              --------->LBD16 ---->LBD16     --------->MYB52(1)              ------------>CBF               <---------LBD16 -----ZAT18    --------->TOE2(2)             <---------ETT(2)          <---------YAB1<---------bZIP60(1) --->RAP2.6(2) --------->TOE1(2)          <----------DOF2     --------->YAB1  <---------LBD16   cacttaacgtattgaaacttacgatcaaatatcaatctctctctctttcgaccaatggactaaatcaaaacttttgattttccggcgatgtcaacgtcac  16819900                  ------->MYC3                  <-------MYC3                 --------->ANAC46               <---------ALFIN1             ----------->RAV1(1)             --------->DEAR3(1)             <---------ALFIN1            --------->ATERF1(1)            <------NtERF2           <---------RAP2.3(1)           ------>NtERF2           <---------ATERF1(1)          --------->PCF2          --------->RRTF1(3)          --------->RAP2.3(3)          --------->DEAR3(1)          --------->RAP2.3(2)          <---------TCP16(1)          <---------DEAR3(1)          --------->RRTF1(2)         --------->RAP2.6(1)         --------->RAP2.3(1)         <------NtERF2         --------->ATERF1(1)         --------->RRTF1(1)         --------->ERF1         --------->ORA47(2)        <---------ORA47(2)        <---------DEAR3(2)        <---------RAP2.3(1)        <---------ATERF1(1)        --------->ABI4(2)        <---------ERF1        ------>NtERF2        <---------RAP2.6(1)        <---------DEAR4(2)                                                          --------->ANAC58       <---------ATERF1(2)                                                          --------->ANAC46       <---------RRTF1(3)                                                           --------->ANAC58       <---------RAP2.3(2)                                                          <---------ANAC55(2)       --------->ATERF1(2)                                                          --------->ANAC55(1)       <---------RRTF1(2)                  --------->TOE2(3)                        --------->ANAC55(2)       <---------RAP2.3(3)                <---------ICU4                  <---------ANAC58       --------->DEAR3(1)                 --------->ATHB12                ----------->GT1       <---------DEAR3(1)              --------->WOX13(1)                 <---------ANAC46      <------NtERF2                   <-------TEIL                   <---------AtLEC2      --------->ATERF1(1)         <---------TOE1(2)   <------ZmHOX2a(2)   <---------ANAC58      <---------ABI4(1)        --------->ATHB12      --------->ARR11(3)  <------NtERF2       <-------     <---------ATERF1(1)      <------ZmHOX2a(2)      <---------ARR11(3)--------->ALFIN1      --------    ---------->CDC5      <---------LBD16  --------->YAB1             <---------ANAC58    <---------ANAC58    <---------DEAR3(1)<---------RAP2.6(2)<---------ATHB12            <---------ANAC58    <---------ANAC58 ---HVH21--------->DEAR4(2)<------NtERF2 --------->ICU4--------->YAB1<---------ANAC46  ------->TEIL ---TGA1<---------RRTF1(1) --------->LBD16<--------HAHB4            ------>NtERF2  --------------->AtSPL3   aaaccctcggcggcgccacacgttgtggccggatcataggtccatcattagacaagatcataaaaaacgctgcgtggcgtaaacacacgtaccttgtctc  16820000                                                                                            ---------                                                                                           <---------At4g35610                                                              <---------MYB52(1)     <---------At4g35610                                                    <---------HSFB2a(1)              --------->At4g35610                                                    --------->HSFC1(2)             <-----------RAV1(2)                                                    <---------HSFC1(2)            <---------At4g35610                           ------->TEIL ------>NtERF2        <-----------HVH21   <-----------HVH21                           <---------ARR11(1)       --------->HSFB2a(1)        <------NtERF2<--------                    --------->ANAC58 ------>NtERF2 <------ZmHOX2a(2)           --------->LBD16              <---------HSFB2a(2)  --------->HSFB2a(2)    ------>ZmHOX2a(1)    ------>NtERF2<--------      <---------ARR14(2)   <-----------ARR10      <---------ARR11(3)          --------->RAP2.6(2)      --------->ARR14(2)  <---------CCA1(2)       --------->ARR14(2)          --------->DEAR3(1)  <--     <---------GLK1(1)    <---------GLK1(2)       <---------ARR14(2)       <---------DEAR3(1)   <---- --------->AtLEC2   --------->ANAC58--------->LBD16==============HOX2a_HOX2a --------->RAP2.3(1)<---- --CCA1(2)    --------->HSFB2a(2)  <---------HSFB2a(2)------>ZmHOX2a(1)   --------->ATERF1(1)-------- -->ID1    <---------MYB52(1)<-----------ARR10  --------->ANAC46          <------NtERF2 <-------TEIL   ttcatgtaaatccgttctcgacaagctcgaatctcttcccgacgacttccacgatccttcctccgtcgtctctggcctcgccgcatcagatgcagattcc  16820100       <---------DAG2     ------>MYB46(1)     ------>MYB83                                                                                   -     -------->P                                                                                     < >ARR14(2)                                                                                        <-- -GLK1(2)                     --------->At4g35610                                                ---- -ARR14(2)                    <---------At4g35610                        <-----------GT1         <--- -------MYB52(1)      --------->HSFB2a(2)                           <----------DOF2              ---- -----ANAC58          <---------HSFB2a(2)          --------->HSFB2a(1)  <-----------GT1        <----- -----ANAC58      <---------CCA1(2)           <------NtERF2     <---------ZAT18               ------>ZmHOX2a(1) ->GLK1(2)      <---------CCA1(2)      ---------->DOF2          --------->ZAT18               =======   gttctccaaccttttctcttatctctcgaaacagcttattcaaaagtcgtcgagccttctctagattgcgcttttaaactcttctctctctcaatcctcc  16820200         --------->WOX13(1)      ==================================HOX2a_HOX2a      <------ZmHOX2a(2)      --------->CCA1(2)     --------->ARR11(3)                                    ---------->DOF2     <---------ARR11(3)                              ------>NtERF2     --------->AGP1                                  <---------ATERF1(1)    --------->GLK1(1)                               --------->DEAR3(1)   ----------->ARR10                             --------->ANAC46 -------->At5g28300                              --------->DEAR3(1) -----------HVH21                              <---------DOF5.7(2) -------DEAR3(1)                              <---------WRKY12   <---------DEAR3(2) -->NtERF2                                    <---------WRKY38(1)<------MYB46(1) <---------ARR14(2) ------LBD16--------->YAB1                    <---------WRKY45   <------MYB83    --------->ARR14(2) ----->LBD16<---------ICU4                   --------->DOF5.7(2)<---------DEAR4(1) ----LBD16 <---------ATHB12      ------>ZmHOX2a(1)------->GAMYB <---------DEAR3(1) ============HOX2a_HOX2a  <-------TEIL      <-----------HVH21   <---------DREB2C(2)   gcggtgagatccaatcatcaaaacaagattcaatcctcttcaaactcgtcaacgccgtctccaaagtcggtgctatagccgaagaaccgattcaactcgc  16820300                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                            --------->GLK1(1)                            <---------GLK1(1)                           <---------AGP1                <---------ANAC58                           --------->ARR14(2)            <---------ANAC46                           <---------ARR14(2)       <---------MYB46(3)                           <---------ARR11(3)       --------->ATHB12                        <--------                       <---------MYB52(1)       --------->ALFIN1                           <---------                      <---------RAP2.6(3)      --------->LBD16                          <---------ICU4                      <-------GAMYB           <---------ANAC46                         --------->ICU4                      <-----------HVH21       <---------ANAC58     ------->MYC3       <---------AHL20(2)                   ------>NtERF2     --------->ARR11(3)  <---------ANAC58             <---------AHL20(1)                  --------->DEAR3(1) ------->TEIL  <---------YAB1  <-------MYC3      --------->YAB1                <---------At4g35610 <---------CCA1(2) <---------WOX13(1)            <---------YAB1        <---------ARR11(3) --------->ARR11(3) <---------ANAC58    --------->ANAC46--------->YAB1   <-        --------->ARR11(3)<---------CCA1(2)  ------>ZmHOX2a(2)<-----------GT1  ----------->GT1-------   tgttcttagagttcttctcgctgccgttagatctccatgtatcttgatccgtggtgattgcttgttacacgttgtcaagacttgttataatatttacctt  16820400  Previous    Next  AGI:  At4g35380.1    Description:  guanine nucleotide exchange family protein. similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT3G60860.1); similar to EDA10 (embryo sac development arrest 10), guanyl-nucleotide exchange factor [Arabidopsis thaliana] (TAIR:AT1G01960.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G38200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47550.1); similar to putative guanine nucleotide-exchange protein GEP2 [Oryza sativa (japonica cultivar-group)] (GB:BAD35378.1); similar to putative guanine nucleotide-exchange protein GEP2 [Oryza sativa (japonica cultivar- Range:  from: 16819888    to: 16826066    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version