Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------>ZmHOX2a(2)                      --------->AGP1                      --------->ARR11(3)                      <---------ARR14(3)                      --------->ARR14(2)           <---------YAB1        --------->TOE1(2)       <---------ZAT2 <---------ARR11(3)       <---------HSFC1(2)       <---------At4g35610       --------->HSFC1(2)       <---------HSFB2a(1)                                       --------->ZAT14       --------->At4g35610                                       <---------ZAT14      ----------->ARR10<------ZmHOX2a(2)                     <---------------AtSPL8      --------->ANAC58--------->ARR14(3)                  <---------YAB1  --------->ANAC58    <-----------ARR10                 <---------ICU4        <----------DOF2  --------->ANAC58   --------->RVE1(1)      --------->ANAC58 --------->HSFB2a(2) ------->LBD16      ----------->ARR10       --------->ANAC58 <---------HSFB2a(2) ------LBD16      ---------->DOF2  --------->REM1(1)   <---------YAB1     --------->DAG2 --GT1--------->ANAC58<---------ARR14(2)-------->P     --------->ICU4    ---------->DOF2   <---------YAB1   ccgcagggaagctacgatagtaaagatcttcacacttacatctaccaagaaaacaccattattctagtacagagataaagcttttgaacgattacgattt  16810100              <----------TaMYB80             <---------KAN4(2)          <------MYB46(1)          <------MYB83                            <---------ANAC58         --------->MYB59                          <---------ANAC58               --------->ANAC46        <--------P<-----------GT1               <-----------GT1         <---------YAB1    <---------ANAC46                           <-----------GT1--------->HSFB2a(1)--------->ANAC58    <---------ANAC58                      <---------AHL20(2)  <---------HSFB2a(1)--------->ANAC58    <---------ANAC58                 --------->ICU4         <-----------GT1    <-----------GT1   tgtttttcgtgtaggtatattcacatttgtgcttctgtattgatttttttttccgtctcatgaaaccttctattctcatttgtacgataccaaaacttat  16810200                                                                              --------->TOE2(3)                                                                             --------->ATHB12                                                                             <---------ICU4                                                                             --------->YAB1                                                                            --------->ICU4                                                                            <---------ATHB12                                                                          <---------ICU4                                                                      <---------YAB1                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                         <---------AHL20(2)      --------->GLK1(1)                                        <---------AHL20(2)       <---------CCA1(1)                                        <---------AHL20(1)       <---------RVE1(1)                                       --------->ICU4           --------->ARR14(2)                                  <---------ANAC55(2)           <---------ARR11(3)  ------->GAMYB                                  --------->ANAC58              <---------ARR14(2)<---------At5g28300                                  --------->ANAC58            --------->LBD16<--------HAHB4                                  --------->ANAC46     --------->ANAC58   --------->YAB1          ---       <-----------GT1            --------->ANAC55(2)  --------->ANAC46  --------->ICU4           <--    ----------->GT1      <-----------GT1--------->AHL20(2)  <---------LBD16 <---------YAB1 ------->TEIL --------->YAB1      ----------------------->TaNAC69(2)--------->ANAC58--------->YAB1   ----------->HVH21   caagaatagttacaatttcagaaattttaagcctctacgtaattttttttataaaacacccctccggatattttaataatcattaactgtctgaacgtga  16810300                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                         <---------AHL20(2)                                                                                        <---------AHL20(2)                                                                            <---------SPL7      <----                                                       ------->GAMYB        <---------ZAT18   -------                               --------->DAG2        ------>MYB83          <---------ANAC58  <-------       ----------->GT1       ---------->DOF2         -------->P <---------LBD16         --------->AHL20(2)   ------->TEIL   --------->ANAC58                   ------>MYB46(1)       <---------ANAC58  -------- ------>At4g35610 --------->ANAC58                ------>ZmHOX2a(2)    --------->DEAR3(2)--------->AHL20(2) -------At4g35610<---------ZAT18            --------->YAB1--------->REM1(2)<---------ANAC46 ---------   agctgtatgttgaaaattgcacgcttagaacaaaaggcttaaccaaaaatgatccaaccgtgaagactcggagaccggcgtacttagtttttaaattaat  16810400    <----------DOF2 ----------CBF ----->ATHB12 ----->YAB1 ---->ATHB1 ------ICU4                         <---------ANAC58 ---->ICU4             ------>ZmHOX2a(1) -----ATHB12          --------->TOE2(2)                                           --------->ANAC46 -----YAB1            --------->TOE1(2)                                         <-----------GT1 -->WOX13(1)       --------->ARR14(2)   ---------->ID1                        <-----------HVH21   <<< --AHL20(2)        <---------ARR14(2)   ---------->ARF1                <---------ZAT14 <---------CCA1(2) ->AHL20(2)     ------------>CBF    <---------ANAC58                   --------->ZAT14 *TSS    <<<<<< >AHL20(2)  ---------->DOF2    <----------DOF2   ----------->GT1    ------>ZmHOX2a(1)--------->AtMYB61   cattgtctttgcttcaaagccaatcctatgagactttgtcttgtctccaacttgtatataagctctattcctctactctgtttcacaccatctcttcttc  16810500                                                                        <---------ANAC58            <                                                                        <-------GAMYB              <-                                              --------->AtMYB61         <---------ANAC58         ----                                          --------->ZAT18              <---------MYB46(3) <---------At4g35610                  <-----------------AGL1  <---------ZAT18             <---------AtMYB61   --------->ZAT2                <---------ZAT14    <----------DOF2         <---------GLK1(2)              --------->At4g35610    ------>ZmHOX2a(1)              <---------DAG2          --------->ARR14(2)         <-----------HVH21 <<<<<<TBF1     --------->ZAT14   <---------ANAC58         <---------ARR14(2)       --------->At4g35610 <<<TBF1        <---------ZAT18   <---------ANAC58  <----------DOF2<----------DOF2  <---------At4g35610   ttcttcctcttctctcagtgaacaaatttggctatggctttttctgcaccatcactttccaaattctctcttttggttgccatttcagcatcagctctcc  16810600                                            <------NtERF2                                          --------->DEAR3(1)                                         <---------LBD16                                       --------->ANAC58                                       --------->ANAC58                      --------->ARR11(3)                                       --------->ANAC46                      <---------ARR11(3)                                     <---------ALFIN1                   <---------HSFB2a(2)                                    <---------REM1(2)                   --------->HSFB2a(2)                                    <-------TEIL                        --------->HSFC1(1)          -       <----------DOF2             --------->CCA1(2)               --------->HSFC1(2)               < <---------MYB52(1)         <-----------RAV1(1)                    <---------HSFC1(2)             --- -------GAMYB   <---------MYB52(1)<---------ARR14(2)              --------->ANAC58                <-- ----------RAV1(1)     >>>>>>>>>>>>>>>>>LFY--------->LBD16        --------->ANAC58            <------ -->ZmHOX2a(1) --------->LBD16    --------->ARR14(2)         ----------->HVH21              ------->TEIL   tctgttgtgcttttgcccgtgatttctccattgttggatacacgccggagcatttgacaaacactgacaagcttctagagctcttcgagtcatggatgtc  16810700                                    --------->ZAT14                                    <---------ZAT14                                    <-------TEIL                          <---------ANAC46                       --------->ALFIN1                       --------->ARR14(2)                 ----           <---------ANAC58         --------->ZAT18           <-----------ARR10                <----- -------->ZAT14      <---------ANAC46                         --------->GLK1(2)               <------ ---------ZAT14      <---------ANAC58                         <---------ARR14(2)              ------- ------>At4g35610    <---------ANAC58                        <---------GLK1(2)      <------ZmHOX2a(1) -------At4g35610---------->DOF2--------->DAG2 <---------TOE1(3)                    ================= -----HVH21<---------ANAC58 <------ZmHOX2a(1)  <---------TOE2(3)  --------->At4g35610      --------->YAB1   agaacacagcaaggcttacaaaagcgtggaggagaaggtgcacaggtttgaggttttcagagagaatctgatgcatatagaccagaggaacaatgagatc  16810800                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                          ---------->DOF2                                                                       --------->AtLEC2                                                                --------->HSFB2a(2)                                                             <---------ARR11(3)                                                            --------->RVE1(1)                                  ----------->HVH21         <---------RVE1(1)                               <---------ARR14(2)           <---------GLK1(1)                               <-----------ARR10            <---------CCA1(1)               ---------                               --------->ARR14(2)           --------->GLK1(1)            --------->HSFB2a(2) -------->AtMYB77            --------->LBD16                --------->CCA1(1)            <---------HSFC1(1) -ZmHOX2a(2)                <---------ANAC58               --------->ARR11(3)            --------->HSFC1(1) ---ARR11(3)                <---------ANAC58               <---------ARR11(3)  --------->RAP2.6(2) -->ARR11(3)                <---------ANAC46       ---------->DOF2 <------ZmHOX2a(1)     <---------HSFB2a(2) =HOX2a_HOX2a              <---------LBD16    ----------->GT1--------->ARR11(3)----------->RAV1(1)   aacagttactggctcggtttgaacgagtttgcggatttgacccatgaagagttcaaaggaagatatctaggacttgcaaagccacaattctctagaaaga  16810900                                     <---------ANAC58                                 --------->ANAC58                          --------->ALFIN1       <--                                 <---------ANAC55(2)                     ============================                                 --------->ANAC58                        --------->ALFIN1         <--                                <---------LBD16                          <-----------RAV1(1)     ----                     <-------TEIL--------->ANAC55(2)--------->ZAT14     <------NtERF2    <------ZmHOX2a(1)                <-----------RAV1(2)  <---------ANAC58        ---------->DOF2  <---------PCF2<--------        <---------ZAT2      --------->GLK1(1)       <---------ZAT14     <----------CDC5--------->ANAC58        <---------At4g35610 <---------GLK1(1)     --------->LBD16  --------->DAG2      --------->ANAC58        --------->At4g35610--------->ARR11(3) --------->ARR14(2)  ---------->DOF2  <-----------HVH21 ->DOF2 --------->ZAT2     <---------ARR11(3) <---------ARR14(2) ---------->DOF2  ------>ZmHOX2a(1)   gacagccctcagctaacttcaggtacagagatatcacggacttgcctaaatccgtagactggagaaagaaaggcgctgtggctcctgtcaaggaccaggg  16811000  Previous    Next  AGI:  At4g35350.1    Description:  XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type peptidase. Identical to Xylem cysteine proteinase 1 precursor (XCP1) [Arabidopsis Thaliana] (GB:O65493); similar to XCP2 (XYLEM CYSTEINE PEPTIDASE 2), cysteine-type peptidase/ peptidase [Arabidopsis thaliana] (TAIR:AT1G20850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47540.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin Range:  from: 16810487    to: 16812014    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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