Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <----------DOF2                                           --------------->AGL15                                           <---------------AGL15                                           ==========================================================                                       <---------ANAC58                                       <---------ANAC46                                    <---------MYB52(1)                                    <--------P                     <---------AHL20(2)                                  <---------MYB46(3)               --------->AHL20(2)                                ------->TEIL                    ------->TEIL              <---------YAB1   ------------>AtMYB77     <------ZmHOX2a(2)          <----------DOF2      --------->MYB52(1)      --------->ARR11(3)    <---------YAB1  <------ZmHOX2a(1)  <---------ANAC58<---------ARR11(3)           --------->SPL7 --   gagattactattctttctgataggagattgaatgaacggttgcttcttttacaagtagatcacatgtatttaaattagtcttctcatacgacgagaataa  16801600                                     --------->At5g28300                                     --------->DOF5.7(2)                                    ------->GAMYB                                    ----------->GT1                                  <---------TOE2(3)                                 <---------DOF5.7(2)                                 <-----------GT1                                       <-------------                               <---------MYB52(2)                                      --------------                             <---------------AGL15                                     <---------YAB1                             ========================================================================                             --------------->AGL15                                    ---------------                            <---------YAB1                           --------------->AtSPL8                          <-----------GT1                            <---------------AtSPL8                      --------->AHL20(2)                        <---------YAB1        <--------------                      <---------AHL20(2)                    ------->TEIL         ------>MYB46(1)                     <---------AHL20(2)                --------->GLK1(1)         ------>MYB83              <---------ANAC55(2)--------->MYB52(1)   --------->ARR14(2)        ----------->RAV1(1) ============================================MADS_MADS<---------ARR14(2)      --------->MYB46(3) ------->MYB46(3)    --------->AHL20(2)    ----------->GT1<-------TEIL      --------->ANAC46   aaccatcgtgcttaatacttaaatttttttacaattaacggtaactagtaaaaccagaaatgcattttgattttgtacaaaccaacattctaattttagt  16801700                                                       <---------ICU4                                                      <---------ATHB51                                                    --------->YAB1                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                                  --------->AHL20(2)                                                  --------->AHL20(1) --AGL15                                          <---------AHL20(2)                       <---------At4g35610 ->AGL15         <---------AHL20(2)      ----------->GT1     ---------->DOF2               --------->At4g35610 ==MADS_MADS    --------->AHL20(2)   --------->GLK1(2)--------->ICU4                 <------ZmHOX2a(1) -->AGL3    <---------YAB1           <---------ARR14(2)-------->HAHB4  ---------->DOF2     <---------LBD16 ---AGL2  --------->YAB1      ---------->DOF2--------->AHL20(2)    --------->At4g35610    --------->MYB52(1)   tttttttttcaattacaatttaaacgataaacaaaagagaaactggtttaaatttaataatgcaaaagcagaagaaagaaggtgagaggaaacagcggag  16801800                                                                          --------->At5g28300                                                                          --------->LBD16                                                                         --------->RAP2.6(2)                                                                         <---------ANAC46                                                                         ----------->GT1                                                                         --------->RAP2.3(2)                                                                        <------NtERF2                                                                        --------->RAP2.3(1)                                                                       --------->ABI4(1)                                                                       <---------ATERF1(1)                                                                       ------>NtERF2                                                                      --------->ANAC46                                                                      --------->DEAR3(1)                                                                      <---------DEAR3(1)                                             <---------AHL20(2)       --------->RAP2.3(2)                                             --------->AHL20(2)       --------->RAP2.3(3)                                          --------->YAB1              --------->RRTF1(3)                              <---------ANAC58                       --------->ATERF1(1)                              <---------ANAC46                       --------->ERF1                             <---------At4g35610  <---------ARR11(3) --------->RAP2.3(1)                <---------REM1(1)    <---------ZAT18                 --------->ORA47(2)                <---------ANAC46     <---------ZAT14               ------->GAMYB --------->AHL20(2)                --------->ALFIN1     --------->ZAT18 <----------DOF2 --------->DEAR4(2)              <---------ANAC46<---------ANAC58---------->DOF2     --------->MYB46(3)          <------      <-----------HVH21      --------->At4g35610  --------->ARR11(3)<---------ATERF1(1) --------->AtMYB61   agagacagagtcagagaggtgtagaagtagtagctggtgagcactaataaaagacctttcttcgctcaatcgccgccgtaaaataaaacaccatcacatt  16801900                                                                                            *TSS                                   --------->ARR11(3)                                      --------->ARR11(3)         <-----------ARR10         <---------ARR11(3)                                      --------->AHL20(1)         ------->TEIL          ---------->DOF2                                             <---------AHL20(1)         --------->GLK1(2)    --------->AtMYB61         <---------YAB1                     <---------AHL20(2)        <---------ARR14(1) ------>MYB46(1)           <---------YAB1                     --------->AHL20(2)      <---------ATHB12     ------>MYB83             <---------AHL20(2)               --------->YAB1      --------->MYB46(3) <---------MYB59     --------->ARR11(3)               --------->AHL20(2)    --------->MYB52(1)   --------->AtMYB61   <---------ARR11(3)              --------->AHL20(2)     <  --------->MYB46(3)     --------->MYB46(3)  --------->GLK1(2)               <---------AHL20(2)<----- ---GLK1(2)          <---------ETT(1)       --------->RVE1(1)   ------------>CBF --------->AHL20(2) <   ctcatccaacgaatctaatctatccgaccaaaccaaagctcttaaaaaatctatttttattcttacttcaatctctgaaataaataaacataaaatattg  16802000        <-----------RAV1(1)      <----------DOF2                                           <---------At4g35610 <----------DOF2                                                --------->At4g35610 ---------ANAC58          <----------DOF2             <----------DOF2     ------>ZmHOX2a(1) ----REM1(1)       <---------DAG2                  ---------->ID1 --------->GLK1(2)               <-- ---------ANAC58   <----------DOF2                <-----------GT1<---------GLK1(2)   <----------DOF2   tagctttcctttgttgttcgacttttctcttttgtctcccctaaatttagtttctccttttaagtcagattccttcctaatcccattctttcagtcttct  16802100                                             <----------DOF2                                            <---------ANAC58                               --------->HSFC1(2)                                            <---------ANAC58                               <---------HSFB2a(1)                                          <-----------GT1                                  <---------HSFC1(2)                                  ------>ZmHOX2a(2)                                <-------TEIL                                 <------ZmHOX2a(2)                                <------ZmHOX2a(2)                                --------->ARR14(2)                               --------->ARR11(3)                                <---------ARR11(3)                               --------->AGP1                                <---------ARR14(2)                               <---------ARR11(3)                                --------->ARR11(3)                               --------->ARR14(2)                                <---------GLK1(2)                            ---------->DOF2                                --------->AGP1                           <----------DOF2   --------->HSFB2a(1)                              ----------->ARR10                         <---------------AGL15                         <--------P   <---------DAG2                    --------------->AGL15                       ----------->GT1<----------DOF2                  ----------------->AGL3 --------DOF2     --------->MYB46(3)------>ZmHOX2a(1)        <---------MYB52(1)  <---------ARR14(2)   ctttcgcccttctgagttcaacaactggtaactagatcctctttttgctttacttcattctctgttttgttattcctttaaaagatccatcgaaacttct  16802200                                                    <---------ANAC46                                                    <---------ANAC58                                           --------->ALFIN1                                         <---------bZIP60(2)                                         ================================================bZIP_DOF                                         ==========================bZIP_DOF                                         <---------O2                                         <---------TGA1a                                         <---------ANAC46                             <---------MYB52(1)                                      ----------->HVH21                              <-------GAMYB                                     ------>ZmHOX2a(2)                         <---------TOE1(3)                                    <---------At4g35610 <----------DOF2        <---------TOE2(3)         <----------DOF2       <----------DOF2      <---------ANAC58      ----------->GT1         ==========================================bZIP_DOF               <---------ZAT6  <----------DOF2       ---------->ID1          ====================bZIP_DOF     <---------ANAC58    --------->MYB52(2)   ================================================bZIP_DOF     <---------ANAC58   <-------TEIL   <----------DOF2        <-----------GT1<-----------RAV1(1)<----------DOF2   ---------->DOF2   tagctctttgtcttttttttggttattttgactctttgatctgatgtgggttttgcgtctttctttacttgtggtattgttaaagttcgttactttgttc  16802300                                                <---------ZAT6                                               >>>>>>>>>TAC1                 <------MYB83             ----------->HVH21                                      ----                 <------MYB46(1)       <----------DOF2--------->ZAT6                       ----------        <---------ANAC46              >>>>>>>>>>>>WRKY18                  <---------------------WRI1    <---------At4g35610  <---------AHL20(2)>>>>>>>>>WRKY18            <----------DOF2---------->DOF2   tcgtttagcttcttgtatttggtctaatttaagtcttttgacttttgacagtgttatctctatgaacagttcctttgatgaagaacacaaagtgaaagtt  16802400                                                           ------>ZmHOX2a(2)                                                         <---------ARR11(3)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                         <---------AGP1                                                         --------->ARR11(3)                                                        <---------CCA1(2)                           <---------YAB1             --------->ALFIN1                   <------MYB83                      --------->LBD16                   <------MYB46(1)                  <---------ANAC58               --------->ARR14(2)                   <---------ANAC46               <---------ARR14(2)                   <---------ANAC58              <------ZmHOX2a(1)                <---------ANAC58    <------ZmHOX2a(1)   <----------DOF2 ----------->GT1             <---------ANAC58   <----------ID1 ----->At4g35610  --------->MYB59            --------->ICU4===============HOX2a_HOX2a      --------->YAB1 >DOF2     <---------LBD16>>>>>>>>>>>>>>>>>LFY<---------ICU4<----------DOF2             --------->YAB1   gctgtctttataaccaggatttggtaattcccattgtttcatgggcaattcttgccgtggatctttcaaggacaaactcgacgaaggcgataacaataag  16802500  Previous    Next  AGI:  At4g35310.1    Description:  CPK5 (CALMODULIN-DOMAIN PROTEIN KINASE 5); calmodulin-dependent protein kinase/ kinase. similar to CPK1 (calcium-dependent protein kinase isoform AK1), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G04870.1); similar to CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G10660.1); similar to CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G17290.1); similar to putative calcium dependent kinase 6 [Brassica rapa subsp. pekinensis] (GB:AAZ32752.1); similar to calcium Range:  from: 16801992    to: 16805000    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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