Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <------ZmHOX2a(1) -----ARR11(1)           <---------ALFIN1        --------------->AtSPL8                  <---------ANAC58 ---->ARR14(2)           --------->DEAR3(1)     <---------ANAC58                         <---------ANAC46 -----ARR11(3)         ------->TEIL  --------->ARR11(3)                                  <---------ANAC58 -----ARR14(2)        <---------ALFIN1          <---------ANAC46                  --------->ARR11(3) ----CCA1(2) <----------DOF2 ------>ZmHOX2a(1)  <---------ANAC58<----------DOF2  <------ZmHOX2a(1)   tctgtatgaggaagtctttatcttgcacctcctcgttaagaccctctatagcttgtactaatctctctttcactgatgaagaaggaccttggcttgttct  16780400                                            --------->HSFC1(2)                                            <---------HSFC1(2)           --------->ARR14(3)               --------->HSFB2a(1)           <-----------ARR10                <---------HSFB2a(1)           <---------ARR14(2)    <---------------AGL15    <---------ZAT14           --------->ARR14(2)    --------------->AGL15    --------->ZAT14--------->ZAT14           <---------ARR11(3) --------->GLK1(2)           --------->ZAT18<---------ZAT14           <---------ARR14(3)<---------ARR14(2)           <---------ZAT18--------->At4g35610     <---           --------->ARR11(3)--------->ARR14(2)      <---------ANAC58--------->ARR14(2)    <-------TEIL          <---------CCA1(2)  <---------GLK1(2)       <---------ANAC58<---------ICU4    --------->DAG2   --------->WOX13(1)------>ZmHOX2a(1)     <-----------ARR10      --------->YAB1----------->GT1------   tggagcaatccaatatcttcttcctccctcagattcttcaaggagaaacttctctgcttgtgcagaactcataactgcagactggtcaaaaggtacttga  16780500              =================================HOX2a_HOX2a              ------>ZmHOX2a(2)            --------->ARR11(3)         ------>ZmHOX2a(1)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->AGP1                                                                   <---------GLK1(2)     --------->ARR14(3)                                                              --------->HSFB2a(1)     <---------GLK1(2)                                                               <---------HSFB2a(1)     <---------ARR14(2)                                                         ----------->HVH21     --------->ARR14(2)                                                     ------>ZmHOX2a(2)     <---------ARR11(3)      <---------AtMYB61                            --------->ARR11(3)     --------->ARR11(3)     <---------MYB52(1)                            <---------ARR11(3)    --------->GLK1(1)      --------->LBD16                            --------->CCA1(2)    <---------GLK1(1)     <---------DEAR3(1)                         <---------ARR14(2)   ----------->ARR10     <---------LBD16                             --------->ARR11(3) ------WOX13(1)     ---------->DOF2                                  <---------ARR11(3)             - --->ATHB12 <---------ARR11(3)          <------ZmHOX2a(1)            --------->ARR14(2)      <-------   ttggagagatcctcgatcttgagaaagcccggtggtattggaggaaactttctccctgtttcttcgttggagatatgatcttgtgaaaggttctcagcat  16780600               <-------TEIL           <---------TOE2(3)           <---------------AtSPL8           <---------------AtSPL3           --------------->AtSPL3         ---------->DOF2      ------->GAMYB  <---------MYB46(3)      --------->TOE2(3)                                  --------->ANAC55(2)      --------->TOE1(3)                               <---------GLK1(2)            --------->ARR11(3)    <-----------------AGL1           --------->YAB1   <---------ARR14(2)           <---------ARR11(3) -------->YAB1--------->CCA1(2)   --------->WOX13(1)  --------->ARR14(2)   <---------At4g35610 --At4g35610 --------->TOE1(2)  <---------YAB1   --------->GLK1(2)         --------->At4g35610 ------   attgataaccgtaaaggtacgagttgttgttgttgtcattcatggtagtagaatcggatacttgttgtcccatggtctgcttcaagctcttaccatcagt  16780700                                                                                           --------->ARR11(3)                                                                                     ----------->GT1             <-------TEIL                             <---------ZAT18   ---------->DOF2  --------->ANAC58          --------->MYB46(3)                 --------->ARR14(2)       --------->ANAC46   --------->ANAC58    --------->ANAC58                         <---------ARR14(2)     --------->ANAC46 <------MYB83    --------->ANAC46                  <---------GLK1(1)          --------->ARR14(2)  <------MYB46(1)    --------->ANAC58        <-------TEIL    <---------CCA1(2)    <---------ARR14(2) --------->MYB46(2) --->At4g35610--------->WOX13(1)      --------->GLK1(1)  <-----------HVH21          --------->MYB59   tgtctcaagccaacatccatcaaacaagagttcatccatgaaatccatatccatagcggagtcagagaatacaccaaagttagagtttggtaagaaattg  16780800                   --------->AtMYB61                                   --------->AHL20(2)                <---------ALFIN1                                      <---------ATHB12                --------->AtMYB61                                    ------>MYB46(1)               --------->MYB46(3)                                   --------->WOX13(1)            --------->ANAC58                                      ------------>CBF            --------->ANAC58                                     ------>MYB83          <---------ALFIN1                                       ------>MYB46(1)       --------->DEAR3(1)                                 ---------->DOF2       --------->AtMYB61                                ------->GAMYB------>MYB83       <---------ALFIN1                                 --------->AtMYB61      --------->MYB46(3)        ------------>CBF      -------->P -------->P--------->AHL20(2)     <--    --------->ANAC46 ------>MYB46(1)                 --------->WOX13(1)--------->YAB1            <---    <---------ALFIN1 ------>MYB83       <----------DOF2--------->MYB46(3)  <---------ATHB51  <-------   ccatctccaccaccacgaccaccttccatatcaaaacaatctctttctcttgtatcaaccaaaagcctaccaatcaaattattcaaagacttgttctttg  16780900                                                                                  ------>ZmHOX2a(2)                                                                <-------GAMYB    <------ZmHOX2a(2)                                                         <----------DOF2        --------->ARR14(2)                             ------>MYB83               <---------ANAC58        <---------ARR14(2) <---------REM1(1)           ------>MYB46(1)      <---------TOE2(3)        --------->MYB52(1)       - ---------RAV1(1)  --------->ANAC46        <-----------------AGL1<---------MYB52(1)           <------ ------TOE2(3)     --------->ANAC58       --------->PCF5<---------ANAC58--------->ANAC46<---------TOE2(3) ---DOF2           --------->ANAC58<----------DOF2<---------TOE1(3)  --------->ETT(2) ---------->DOF2   atgttgtagtaattcaagaaccagcaagaccaagcgtctttgaggtccccttaaggttcctttcgtcgttgtctacataaccgatctgcaaaggttgcag  16781000                                                                       ---------->DOF2                   --------->ANAC46                                 <------ZmHOX2a(2)                   --------->ANAC58                                --------->ARR11(3)              --                   --------->ANAC58                        <---------At4g35610                     <-               ------>MYB83                                --------->At4g35610               <------- -------->YAB1 ------>MYB46(1)   <----------ID1        <-----------HVH21                     <------- ---HSFB2a(2)<---------MYB59 --------->CCA1(2)      <----------DOF2<---------ARR11(3)     ------->TEIL   aaacatgatcaagaaccaaacaagaaacaagataagagccaaaaaaaactcagtctttgtcaactggaagatcaaaagtgtgtttcaacatgtatataat  16781100 ------->ARR11(3)              ----------->GT1                      <------ZmHOX2a(1) --------ARR11(3)<------ZmHOX2a(2)                    --------->WRKY38(1)                  <---------GLK1(2) --YAB1         <---------ARR11(3)     ---------->DOF2--------->WRKY12 <-------TEIL       <---------At4g35610 --AHL20(2)     --------->ARR11(3)   <---------AHL20(2)      ---------->DOF2              --------->At4g35610   agattttaagagatgtgagatcatatatagagagagtatataaaagctagagagagttgacttgaaagaaggattcatcaagtactaacatcagcttctc  16781200                                           <------------ATHB5                                           <---------ICU4                                           <--------ATHB1                                           --------->ATHB51                                           -------->ATHB1                                           --------->ATHB12                                          <---------ATHB51                                          --------->ICU4                           --------->At4g35610                                          <---------ATHB12                         <---------ZAT2                                          <<<<<<<<<<AGL20                          --------->ZAT2                                          <<<<<<<<<<AGL24                          <---------At4g35610                     --------->AtLEC2     <<<<<<<<<<AGL22                        <---------HSFB2a(2)<      --------->KAN4(2)                   <---------YAB1---------->DOF2   --------->AHL20(2)      ---     <---------KAN4(1)                 ------------>ATHB5           --------->AtLEC2        <--------   aagtacaatattccccaatggacatggaaactccaagagggccaattattgagcccttcaaagacaattcatacaaaaaaattccagcagacaataaatg  16781300  Previous    Next  AGI:  At4g35270.1    Description:  RWP-RK domain-containing protein. similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G17150.2); similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G17150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59896.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75893.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47517.1); contains InterPro domain Plant regulator RWP-RK (InterPro:IPR003035); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270) Range:  from: 16777343    to: 16780829    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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