Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->MYB52(1)                                                             ---                   ---------->DOF2                                                           --------                 --------->MYB46(3)                                                     <---------HSFC1(1)             --------->WRKY12                                                           ------>ZmHOX2a(1)           <-------MYC3                         ----------->GT1                         --------->HSFB2a(2)           ------->MYC3               ----------->GT1  --------->MYB52(1)               -------------          <---------O2   --------->ANAC58      --------->ALFIN1        <---------YAB1   <---------HSFB2a(2)        <---------ALFIN1 --------->ANAC58   --------->DAG2          --------->ICU4      --------->HSFC1(1)     --------->ANAC46  <------ZmHOX2a(1)   ---------->DOF2          <---------YAB1      <------------ --->P <---------REM1(2)<---------------------WRI1----------->GT1 --------->YAB1       --------------   cccgaactcgacacgttgaaccaaaggacgaaacattgaatggagaaaagtggagaaaaacggttcgatgatgatgaatgagccatcttcctagaaaaag  16746200                       ---------->DOF2                    --------->ANAC46                    --------->ANAC58                ------>MYB83                --------->MYB52(1)                ------>MYB46(1)               --------->MYB55(1)              <---------MYB46(2)              <---------MYB59                      <----------DOF2              <---------MYB111(1)           --------->ANAC46        <---------ARR11(3)             <---------ICU4    ---------->DOF2 --------->ANAC58--------->bZIP60(1) ------->DOF2--------->ANAC46       --------->TGA2(1) -->DOF2--------->ARR11(3)          <---------TGA2(1)                                               - -->AGL15    --------->ANAC55(2)    <---------bZIP60(1)             <------ZmHOX2a(1)             --- ---AGL15  <-----------GT1 <---------ARR11(3)    ------>MYB46(1)  --------->MYB59       --------->MYB52(2) --->AGL3--------->CCA1(2) --------->ARR11(3)    ------>MYB83   --------->ICU4         <-------TEIL <   aaaagaaaaagatatacctaacacacaaaggtcttatgacatcatcacaccaactttgaaaatgaaattaggaacgagagaattggatgttcgtttccaa  16746300        <---------AHL20(2)        --------->AHL20(2)     --------->YAB1   <---------YAB1                      --------->YAB1   <---------WOX13(1)                 <---------YAB1 ----------->GT1                     <XXXXXXXXXXXXXXXXXXXXMIR868                -------->P --------->ATHB12                   --------->ATHB12                            ------>MYB46(1) -------->ICU4                     --------->ICU4                               ------>MYB83 ------>YAB1--------->YAB1         <---------YAB1                              <---------ALFIN1 ---------YAB1       <----------DOF2<---------ICU4     <---------YAB1     <-----------GT1   <--------   agatgattaataaatgataacttctttcccctgtttgattattagaacttaagagttatttttggtttttgtcaagtttccctacctctgaatgctttta  16746400                                                                           <---------ALFIN1                                                                          --------->MYB46(3)                                                                          <---------MYB55(2)                                     ---------->DOF2                 --------->ANAC46                                    ------>ZmHOX2a(1)                --------->ANAC58               -                             <---------WOX13(1)                      --------->ANAC58              --                          <---------AHL20(2)                   --------->TOE1(3)                  ---                          <---------YAB1                       --------->TOE2(3)           <---------AHL20(2)                         <---------AHL20(2)                 <-----------GT1--------->AtMYB61   <-----                         --------->AHL20(2)   <----------DOF2  --------->YAB1 <---------DAG2---------   --------------->AGL15--------->YAB1--------->DAG2   <---------AHL20(2)-------->P    <-------------   ================================================================================================== --DOF2         <----------DOF2   ------>ZmHOX2a(2)<----------DOF2 ---------->DOF2     --------------   agtttcttcttgtagtttcttttgaattttaattgatcctaaagtgttcttttctttttatttaaccataaaagcaaccactctttcaactattaaaagg  16746500      ---------->DOF2 ----------->GT1 <----------ID1                                          <----------DOF2 ---------->GT1                                         <---------ANAC58 ------->DAG2                                       <------------CBF                               -- ------->DOF2           <------------CBF           <---------ICU4                                 <-- -----ID1             <---------YAB1               --------->ATHB12                            ------ ->DOF2              ------------>CBF             <---------YAB1                               ------ --AGL15      <---------ANAC58 <---------ARR14(2) --------->ICU4                      <------------CBF ==MADS_MADS  <---------ANAC58<---------GLK1(1)  <----------DOF2        --------->AHL20(2)     <----- ->AGL15      --------->ANAC55(2)      --------->ZAT6   <---------ANAC58<---------AHL20(2)     <-----   aaaaggaaaaaagcttacttgataacaattggatatatggaacagtagtgtctttattgctttgttttgtctatataatttgttgtctcattgtctaagc  16746600                                                   <---------HSFB2a(2)                                          <-------TEIL                                        <-------MYC3                                        ------->MYC3       ----------->GT1                  ------->MYC2     ---------->DOF2                    <-------MYC2    *TSS                             <---------ALFIN1 ------->REM1(1)                   --------->AtMYB61            ------>MYB46(1)          ----------->GT1 -----TEIL                         <---------ALFIN1--------->LBD16<----------DOF2      ----------->GT1 --->ZAT2                         --------->MYB46(3)  ---------->DOF2              ---------->DOF2 --->At4g35610              <---------ANAC58       --------->HSFB2a(2)      --------->ARR14(2) ----ZAT2                   <---------ANAC58 <---------At4g35610------>MYB83<---------ARR14(2)  ----- ----At4g35610    --------->YAB1 XXXXXXXXXXXXXXXXXXXXX>MIR2935<---------MYB59    --------->ANAC46   -   tgcatcacaaagtgaaacaagaatgagttagcttgaaccacacgttcatcttccgagaaagaaacctactttctctcaaatccacaaaagagagaaaaaa  16746700                                                                                <---------LBD16                                                                                <---------At4g35610                                                                             <---------At4g35610                                                                          --------->At4g35610          --------->ATHB12                                                <---------At4g35610       <-----------------AG                                        <-----------RAV1(1)     --------->ZAT14                                               <---------ANAC46 ---------->DOF2     <---------ZAT14                           <-------TEIL    <---------ZAT14  --------->At4g35610  ----------->GT1                   <---------ZAT18         <---------ANAC58 <---------ZAT2 ----->DOF2                         --------->ZAT14         <---------ANAC46 --------->At4g35610  --- --------->DOF2                     <---------ZAT14         <---------ANAC58 --------->ZAT2       <--   aagaaagtaaactgatttggctaagaaaatggaaatagtgaagtcgaggttcaagagggtttgtgtgttctgtggtagcagcagcggaaagagagagtgc  16746800                  ------>ZmHOX2a(2)           <---------ALFIN1          <------NtERF2         <---------RAP2.6(3)         ------>NtERF2        --------->bZIP60(1)        --------->ANAC46        --------->ATERF1(2)                      <---------ARR11(3)        --------->RAP2.6(2)                     <---------CCA1(2)        --------->DEAR3(1)                <---------YAB1        --------->RAP2.3(3)            <---------ARR14(2)        --------->RAP2.3(2)            <---------MYB52(1)        <---------ATERF1(2)            --------->ARR14(2)       --------->RAP2.3(1)            <-------GAMYB--------->TOE2(3)     <---------bZIP60(1)             <------MYB46(1)     --------->bZIP60(1)             <------MYB83--------->ARR11(3) ------>ZAT14   --------->ARR11(3)  --------->MYB59--------->YAB1       --------->TOE1(3) -------ZAT14   --------->AGP1 <---------------AtSPL3    --------->YAB1 --------->TOE2(3)   tacagtgatgccgccactgatctagctcaagagctggttcggttatgcttaaatcttaatgagagtcttgaaaacctgaaatgggtcttgatttttatct  16746900                          <---------O2                          <---------bZIP60(2)                          <---------ANAC46                       ----------->TGA1                       ----------->HVH21                     <---------ANAC55(2)                     --------->At4g35610                                      <------MYB46(1)       <            <---------ANAC46                  <---------AtLEC2 <---------AtMYB61                    -            ----------->GT1                 <---------ANAC46--------->ATHB12  <------MYB83          -         <---------MYB52(1)   <------ZmHOX2a(1)         <------ZmHOX2a(1)    <---------AtMYB61      <    <-----------GT1<-----------RAV1(2)------->TEIL   <------ZmHOX2a(1)       --------->MYB59       --   ctgttttctctgttttgtgaaacaggtgacgaggagattgaatcttgtgtatggaggaggaagcattggtctcatgggtttggtctcacaagctgttcat  16747000       <------ZmHOX2a(1)                                              <----------DOF2 ---------At4g35610                                                   <---------DAG2 -------->At4g35610                                            --------->ZAT14           <---------ANAC46 -------->ZAT2                                           <-----------GT1   --------->ATHB12     <---- ---------ZAT2                     ----------->HVH21    <-----------GT1   <---------YAB1 <---------ANAC58 ----->TEIL                  <---------CCA1(2) <----------DOF2 <---------ZAT14           <---------ANAC58   gaagctggaggacatgtactagggtatgctcaaatctatgacctcttcactttagttttttcccctatactgctttatcattgacatagttgtgtgattt  16747100  Previous    Next  AGI:  At4g35190.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47480.1); contains InterPro domain Conserved hypothetical protein CHP00730 (InterPro:IPR005269) Range:  from: 16746604    to: 16748271    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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